Detail Information

Basic Information:


  VIRBase ID:  

VHID00522393

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2RC:           CACNG7:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2RC CACNG7
miRBase
Accession/Entrez ID
MIMAT0012170 59284
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CACNG7
chr19:54433563(+) A-I      intronic
chr19:54433682(+) A-I      intronic
chr19:54432797(+) A-I      intronic
chr19:54440132(+) A-I      intronic
chr19:54440097(+) A-I      intronic
chr19:54433542(+) A-I      intronic
chr19:54432850(+) A-I      intronic
chr19:54440143(+) A-I      intronic
chr19:54440098(+) A-I      intronic
chr19:54432804(+) A-I      intronic
chr19:54440146(+) A-I      intronic
chr19:54437912(+) A-I      intronic
chr19:54433592(+) A-I      intronic
chr19:54438640(+) A-I      intronic
chr19:54438022(+) A-I      intronic
chr19:54442475(+) A-I      intronic
chr19:54441522(+) A-I      intronic
chr19:54433834(+) A-I      intronic
chr19:54441439(+) A-I      intronic
chr19:54430044(+) A-I      intronic
chr19:54434726(+) A-I      intronic
chr19:54435145(+) A-I      intronic
chr19:54439894(+) A-I      intronic
chr19:54442392(+) A-I      intronic
chr19:54431549(+) A-I      intronic
chr19:54429917(+) A-I      intronic
chr19:54441127(+) A-I      intronic
chr19:54437291(+) A-I      intronic
chr19:54441065(+) A-I      intronic
chr19:54442487(+) A-I      intronic
chr19:54441511(+) A-I      intronic
chr19:54439156(+) A-I      intronic
chr19:54420028(+) A-I      intronic
chr19:54441346(+) A-I      intronic
chr19:54432115(+) A-I      intronic
chr19:54434795(+) A-I      intronic
chr19:54442094(+) A-I      intronic
chr19:54437820(+) A-I      intronic
chr19:54439963(+) A-I      intronic
chr19:54433768(+) A-I      intronic
chr19:54433596(+) A-I      intronic
chr19:54437952(+) A-I      intronic
chr19:54433838(+) A-I      intronic
chr19:54436425(+) A-I      intronic
chr19:54434745(+) A-I      intronic
chr19:54437773(+) A-I      intronic
chr19:54432908(+) A-I      intronic
chr19:54435386(+) A-I      intronic
chr19:54441400(+) A-I      intronic
chr19:54437884(+) A-I      intronic
chr19:54440231(+) A-I      intronic
chr19:54437232(+) A-I      intronic
chr19:54432326(+) A-I      intronic
chr19:54442295(+) A-I      intronic
chr19:54430009(+) A-I      intronic
chr19:54434329(+) A-I      intronic
chr19:54430046(+) A-I      intronic
chr19:54431803(+) A-I      intronic
chr19:54438829(+) A-I      intronic
chr19:54440945(+) A-I      intronic
chr19:54438694(+) A-I      intronic
chr19:54438767(+) A-I      intronic
chr19:54442122(+) A-I      intronic
chr19:54441054(+) A-I      intronic
chr19:54438716(+) A-I      intronic
chr19:54430268(+) A-I      intronic
chr19:54442364(+) A-I      intronic
chr19:54441436(+) A-I      intronic
chr19:54441455(+) A-I      intronic
chr19:54420016(+) A-I      intronic
chr19:54432732(+) A-I      intronic
chr19:54430155(+) A-I      intronic
chr19:54430357(+) A-I      intronic
chr19:54430303(+) A-I      intronic
chr19:54437916(+) A-I      intronic
chr19:54435222(+) A-I      intronic
chr19:54441119(+) A-I      intronic
chr19:54437425(+) A-I      intronic
chr19:54431665(+) A-I      intronic
chr19:54441345(+) A-I      intronic
chr19:54442349(+) A-I      intronic
chr19:54441417(+) A-I      intronic
chr19:54422229(+) A-I      intronic
chr19:54435157(+) A-I      intronic
chr19:54436634(+) A-I      intronic
chr19:54440984(+) A-I      intronic
chr19:54441006(+) A-I      intronic
chr19:54441930(+) A-I      intronic
chr19:54431545(+) A-I      intronic
chr19:54433589(+) A-I      intronic
chr19:54432096(+) A-I      intronic
chr19:54434413(+) A-I      intronic
chr19:54434669(+) A-I      intronic
chr19:54437876(+) A-I      intronic
chr19:54442405(+) A-I      intronic
chr19:54444194(+) A-I      intronic
chr19:54442304(+) A-I      intronic
chr19:54435365(+) A-I      intronic
chr19:54433809(+) A-I      intronic
chr19:54434731(+) A-I      intronic
chr19:54433903(+) A-I      intronic
chr19:54438706(+) A-I      intronic
chr19:54442358(+) A-I      intronic
chr19:54433697(+) A-I      intronic
chr19:54431791(+) A-I      intronic
chr19:54442117(+) A-I      intronic
chr19:54432730(+) A-I      intronic
chr19:54438805(+) A-I      intronic
chr19:54438677(+) A-I      intronic
chr19:54430147(+) A-I      intronic
chr19:54442256(+) A-I      intronic
chr19:54432256(+) A-I      intronic
chr19:54434375(+) A-I      intronic
chr19:54438632(+) A-I      intronic
chr19:54433756(+) A-I      intronic
chr19:54430011(+) A-I      intronic
chr19:54441030(+) A-I      intronic
chr19:54439943(+) A-I      intronic
chr19:54440925(+) A-I      intronic
chr19:54432278(+) A-I      intronic
chr19:54434251(+) A-I      intronic
chr19:54440183(+) A-I      intronic
chr19:54437252(+) A-I      intronic
chr19:54434264(+) A-I      intronic
chr19:54434916(+) A-I      intronic
chr19:54442334(+) A-I      intronic
chr19:54435155(+) A-I      intronic
chr19:54437801(+) A-I      intronic
chr19:54432110(+) A-I      intronic
chr19:54430152(+) A-I      intronic
chr19:54435429(+) A-I      intronic
chr19:54430408(+) A-I      intronic
chr19:54432959(+) A-I      intronic
chr19:54434867(+) A-I      intronic
chr19:54435419(+) A-I      intronic
chr19:54433889(+) A-I      intronic
chr19:54431612(+) A-I      intronic
chr19:54431798(+) A-I      intronic
chr19:54439988(+) A-I      intronic
chr19:54441451(+) A-I      intronic
chr19:54422198(+) A-I      intronic
chr19:54440137(+) A-I      intronic
chr19:54430149(+) A-I      intronic
chr19:54431582(+) A-I      intronic
chr19:54437982(+) A-I      intronic
chr19:54435433(+) A-I      intronic
chr19:54437822(+) A-I      intronic
chr19:54433996(+) A-I      intronic
chr19:54435197(+) A-I      intronic
chr19:54441928(+) A-I      intronic
chr19:54433826(+) A-I      intronic
chr19:54435096(+) A-I      intronic
chr19:54434370(+) A-I      intronic
chr19:54441028(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CACNG7
chr19:54445488-54445489(+) m6A CDS       24209618//24981863
chr19:54445515-54445516(+) m6A CDS       24209618//24981863
chr19:54445636-54445637(+) m6A 3'UTR       24209618//25456834//24981863
chr19:54445709-54445710(+) m6A 3'UTR       24209618//25456834//24981863
chr19:54445927-54445928(+) m6A 3'UTR       24209618//25456834//24981863
chr19:54446523-54446524(+) m6A 3'UTR       24209618//25456834
chr19:54446584-54446585(+) m6A 3'UTR       24209618//25456834//24981863
chr19:54446627-54446628(+) m6A 3'UTR       24209618//25456834//24981863
chr19:54446659-54446660(+) m6A 3'UTR       24209618//25456834//24981863
chr19:54446719-54446720(+) m6A 3'UTR       24209618//25456834//24981863

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2RC
Interactor2: CACNG7

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid
Support Database VmiReg

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