Detail Information

Basic Information:


  VIRBase ID:  

VHID00522151

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2RC:           BTBD2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2RC BTBD2
miRBase
Accession/Entrez ID		 MIMAT0012170 55643
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BTBD2
chr19:1991971(-) A-I      intronic
chr19:2006972(-) A-I      intronic
chr19:2007075(-) A-I      intronic
chr19:2007076(-) A-I      intronic
chr19:2007625(-) A-I      intronic
chr19:2007795(-) A-I      intronic
chr19:2008115(-) A-I      intronic
chr19:2006799(-) A-I      intronic
chr19:1995413(-) A-I      intronic
chr19:2008179(-) A-I      intronic
chr19:1991951(-) A-I      intronic
chr19:1992031(-) A-I      intronic
chr19:1992044(-) A-I      intronic
chr19:1992133(-) A-I      intronic
chr19:1992252(-) A-I      intronic
chr19:1992390(-) A-I      intronic
chr19:1995118(-) A-I      intronic
chr19:1995419(-) A-I      intronic
chr19:1995437(-) A-I      intronic
chr19:1995921(-) A-I      intronic
chr19:1995945(-) A-I      intronic
chr19:2001066(-) A-I      intronic
chr19:2001784(-) A-I      intronic
chr19:2001789(-) A-I      intronic
chr19:2002012(-) A-I      intronic
chr19:2002610(-) A-I      intronic
chr19:2002628(-) A-I      intronic
chr19:2002629(-) A-I      intronic
chr19:2002764(-) A-I      intronic
chr19:2002813(-) A-I      intronic
chr19:2004336(-) A-I      intronic
chr19:2002874(-) A-I      intronic
chr19:2004316(-) A-I      intronic
chr19:2004429(-) A-I      intronic
chr19:2004509(-) A-I      intronic
chr19:2004851(-) A-I      intronic
chr19:2008788(-) A-I      intronic
chr19:2008859(-) A-I      intronic
chr19:2009244(-) A-I      intronic
chr19:2009335(-) A-I      intronic
chr19:2009342(-) A-I      intronic
chr19:2009378(-) A-I      intronic
chr19:2009412(-) A-I      intronic
chr19:2009686(-) A-I      intronic
chr19:2010775(-) A-I      intronic
chr19:2012316(-) A-I      intronic
chr19:2004934(-) A-I      intronic
chr19:2005924(-) A-I      intronic
chr19:2005963(-) A-I      intronic
chr19:2005979(-) A-I      intronic
chr19:2006504(-) A-I      intronic
chr19:2005883(-) A-I      intronic
chr19:2006715(-) A-I      intronic
chr19:1995040(-) A-I      intronic
chr19:2004435(-) A-I      intronic
chr19:2001117(-) A-I      intronic
chr19:2010912(-) A-I      intronic
chr19:2008463(-) A-I      intronic
chr19:2004475(-) A-I      intronic
chr19:2011982(-) A-I      intronic
chr19:1988665(-) A-I      intronic
chr19:2003556(-) A-I      intronic
chr19:1992020(-) A-I      intronic
chr19:1988718(-) A-I      intronic
chr19:2005844(-) A-I      intronic
chr19:2009965(-) A-I      intronic
chr19:2001306(-) A-I      intronic
chr19:2006942(-) A-I      intronic
chr19:2003386(-) A-I      intronic
chr19:1988724(-) A-I      intronic
chr19:2008202(-) A-I      intronic
chr19:1992447(-) A-I      intronic
chr19:2006001(-) A-I      intronic
chr19:2010016(-) A-I      intronic
chr19:2004569(-) A-I      intronic
chr19:2006994(-) A-I      intronic
chr19:2004408(-) A-I      intronic
chr19:2008489(-) A-I      intronic
chr19:2010879(-) A-I      intronic
chr19:2001804(-) A-I      intronic
chr19:2009749(-) A-I      intronic
chr19:2004411(-) A-I      intronic
chr19:1994301(-) A-I      intronic
chr19:2004760(-) A-I      intronic
chr19:1992001(-) A-I      intronic
chr19:2002754(-) A-I      intronic
chr19:1995927(-) A-I      intronic
chr19:2004434(-) A-I      intronic
chr19:2002352(-) A-I      intronic
chr19:2007587(-) A-I      intronic
chr19:2007645(-) A-I      intronic
chr19:2006812(-) A-I      intronic
chr19:2003524(-) A-I      intronic
chr19:2008100(-) A-I      intronic
chr19:1988670(-) A-I      intronic
chr19:2012194(-) A-I      intronic
chr19:2004461(-) A-I      intronic
chr19:1995774(-) A-I      intronic
chr19:2004341(-) A-I      intronic
chr19:2007271(-) A-I      intronic
chr19:2006035(-) A-I      intronic
chr19:2008702(-) A-I      intronic
chr19:1988772(-) A-I      intronic
chr19:2009156(-) A-I      intronic
chr19:2006774(-) A-I      intronic
chr19:2002019(-) A-I      intronic
chr19:2001805(-) A-I      intronic
chr19:2004425(-) A-I      intronic
chr19:2005871(-) A-I      intronic
chr19:2004957(-) A-I      intronic
chr19:1995764(-) A-I      intronic
chr19:2008141(-) A-I      intronic
chr19:2001848(-) A-I      intronic
chr19:2007794(-) A-I      intronic
chr19:2007662(-) A-I      intronic
chr19:1992000(-) A-I      intronic
chr19:1989338(-) A-I      intronic
chr19:2007526(-) A-I      intronic
chr19:2003229(-) A-I      intronic
chr19:1992189(-) A-I      intronic
chr19:2005992(-) A-I      intronic
chr19:1995553(-) A-I      intronic
chr19:2006025(-) A-I      intronic
chr19:2012322(-) A-I      intronic
chr19:2008508(-) A-I      intronic
chr19:2008469(-) A-I      intronic
chr19:1992709(-) A-I      intronic
chr19:2001200(-) A-I      intronic
chr19:2008422(-) A-I      intronic
chr19:1992372(-) A-I      intronic
chr19:2001944(-) A-I      intronic
chr19:2008769(-) A-I      intronic
chr19:1995732(-) A-I      intronic
chr19:2007590(-) A-I      intronic
chr19:2005669(-) A-I      intronic
chr19:1994675(-) A-I      intronic
chr19:1994636(-) A-I      intronic
chr19:2004915(-) A-I      intronic
chr19:2008663(-) A-I      intronic
chr19:2009210(-) A-I      intronic
chr19:1989340(-) A-I      intronic
chr19:1989357(-) A-I      intronic
chr19:1989290(-) A-I      intronic
chr19:1988740(-) A-I      intronic
chr19:2006825(-) A-I      intronic
chr19:2008532(-) A-I      intronic
chr19:1996925(-) A-I      intronic
chr19:2007725(-) A-I      intronic
chr19:2004721(-) A-I      intronic
chr19:2001996(-) A-I      intronic
chr19:2009683(-) A-I      intronic
chr19:2001875(-) A-I      intronic
chr19:2005417(-) A-I      intronic
chr19:1994634(-) A-I      intronic
chr19:2009677(-) A-I      intronic
chr19:2001038(-) A-I      intronic
chr19:2001919(-) A-I      intronic
chr19:1992667(-) A-I      intronic
chr19:2005439(-) A-I      intronic
chr19:2002283(-) A-I      intronic
chr19:1992207(-) A-I      intronic
chr19:1992230(-) A-I      intronic
chr19:1988699(-) A-I      intronic
chr19:1992144(-) A-I      intronic
chr19:2010149(-) A-I      intronic
chr19:1988741(-) A-I      intronic
chr19:2006714(-) A-I      intronic
chr19:1992371(-) A-I      intronic
chr19:2007024(-) A-I      intronic
chr19:1989307(-) A-I      intronic
chr19:2001911(-) A-I      intronic
chr19:1992708(-) A-I      intronic
chr19:1992021(-) A-I      intronic
chr19:2003744(-) A-I      intronic
chr19:2002683(-) A-I      intronic
chr19:2007262(-) A-I      intronic
chr19:2004447(-) A-I      intronic
chr19:2004294(-) A-I      intronic
chr19:2009426(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED BTBD2
chr19:1988658(-) T-C intron -    22484847
chr19:1992189(-) A-G intron -    22484847
chr19:1992699(-) A-G intron -    22484847
chr19:2004331(-) A-G intron -    22484847
chr19:2006825(-) A-G intron -    22484847
chr19:2007590(-) A-G intron -    22484847
chr19:2008397(-) A-G intron -    22484847
chr19:2008422(-) A-G intron -    22484847
chr19:2009199(-) G-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BTBD2
chr19:1985459-1985460(-) m6A 3'UTR//exon       24284625//28052920//27773535
chr19:1985493-1985494(-) m6A 3'UTR//exon       24284625//28052920//27773535
chr19:1985536-1985537(-) m6A 3'UTR//exon       24284625//28052920//27773535
chr19:1985740-1985741(-) m6A 3'UTR//exon       24284625//24981863//22575960
chr19:1985746-1985747(-) m6A 3'UTR//exon       24284625//24981863//22575960
chr19:1986002-1986003(-) m6A 3'UTR//exon       24284625//27773535
chr19:1986038-1986039(-) m6A 3'UTR//exon       24284625//27773535
chr19:1986194-1986195(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr19:1986228-1986229(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr19:1986235-1986236(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr19:1986248-1986249(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr19:1986544-1986545(-) m6A CDS//exon       24284625//27773535
chr19:1986575-1986576(-) m6A CDS//exon       24284625//27773535
chr19:1987171-1987172(-) m6A CDS//exon       27773535
chr19:1987663-1987664(-) m6A CDS//exon       27773536
chr19:1987877-1987878(-) m6A exon//intron       25456834
chr19:1988335-1988336(-) m6A exon//intron       25456834
chr19:1988482-1988483(-) m6A exon//intron       -
chr19:1989789-1989790(-) m6A exon//intron       24284625//25456834//22575960//22608085
chr19:1989867-1989868(-) m6A exon//intron       24284625//25456834//22575960//22608085
chr19:1990076-1990077(-) m6A CDS//exon//intron       24284625//27773536
chr19:1990199-1990200(-) m6A CDS//exon       -
chr19:1990762-1990763(-) m6A CDS//exon       24284625//27773536
chr19:1990774-1990775(-) m6A CDS//exon       24284625//27773536
chr19:1990803-1990804(-) m6A CDS//exon       24284625//27773536
chr19:1997368-1997369(-) m6A 3'UTR//CDS       24284625
chr19:2013556-2013557(-) m6A 3'UTR//intron       24284625
chr19:2013563-2013564(-) m6A 3'UTR//intron       24284625
chr19:2013632-2013633(-) m6A 3'UTR//intron       24284625
chr19:2013651-2013652(-) m6A 3'UTR//intron       -
chr19:2013736-2013737(-) m6A 3'UTR//intron       24981863
chr19:2013744-2013745(-) m6A 3'UTR//intron       -
chr19:2013777-2013778(-) m6A 3'UTR//intron       -
chr19:2013798-2013799(-) m6A CDS//intron       -
chr19:2013876-2013877(-) m6A CDS//intron       24284625
chr19:2015371-2015372(-) Y CDS//intron       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BTBD2
Chromatin K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2RC
Interactor2: BTBD2

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid
Support Database VmiReg

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