Detail Information

Basic Information:


  VIRBase ID:  

VHID00521499

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2RC:           ZC3H3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2RC ZC3H3
miRBase
Accession/Entrez ID		 MIMAT0012170 23144
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - SMICL//ZC3HDC3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZC3H3
chr8:144532483(-) A-I      intronic
chr8:144532447(-) A-I      intronic
chr8:144532428(-) A-I      intronic
chr8:144532382(-) A-I      intronic
chr8:144531861(-) A-I      intronic
chr8:144531764(-) A-I      intronic
chr8:144532457(-) A-I      intronic
chr8:144525368(-) A-I      intronic
chr8:144525379(-) A-I      intronic
chr8:144525408(-) A-I      intronic
chr8:144525441(-) A-I      intronic
chr8:144525449(-) A-I      intronic
chr8:144526277(-) A-I      intronic
chr8:144526283(-) A-I      intronic
chr8:144526301(-) A-I      intronic
chr8:144526305(-) A-I      intronic
chr8:144526309(-) A-I      intronic
chr8:144526346(-) A-I      intronic
chr8:144526373(-) A-I      intronic
chr8:144526378(-) A-I      intronic
chr8:144526439(-) A-I      intronic
chr8:144527512(-) A-I      intronic
chr8:144530078(-) A-I      intronic
chr8:144530082(-) A-I      intronic
chr8:144530244(-) A-I      intronic
chr8:144530295(-) A-I      intronic
chr8:144530354(-) A-I      intronic
chr8:144530475(-) A-I      intronic
chr8:144531649(-) A-I      intronic
chr8:144531675(-) A-I      intronic
chr8:144537917(-) A-I      intronic
chr8:144616410(-) A-I      intronic
chr8:144616078(-) A-I      intronic
chr8:144616064(-) A-I      intronic
chr8:144615983(-) A-I      intronic
chr8:144615948(-) A-I      intronic
chr8:144604973(-) A-I      intronic
chr8:144545436(-) A-I      intronic
chr8:144545427(-) A-I      intronic
chr8:144545421(-) A-I      intronic
chr8:144545401(-) A-I      intronic
chr8:144545373(-) A-I      intronic
chr8:144545372(-) A-I      intronic
chr8:144545226(-) A-I      intronic
chr8:144541094(-) A-I      intronic
chr8:144541073(-) A-I      intronic
chr8:144539990(-) A-I      intronic
chr8:144539819(-) A-I      intronic
chr8:144539802(-) A-I      intronic
chr8:144539793(-) A-I      intronic
chr8:144539780(-) A-I      intronic
chr8:144539667(-) A-I      intronic
chr8:144539657(-) A-I      intronic
chr8:144538060(-) A-I      intronic
chr8:144538056(-) A-I      intronic
chr8:144538031(-) A-I      intronic
chr8:144538024(-) A-I      intronic
chr8:144537584(-) A-I      intronic
chr8:144537544(-) A-I      intronic
chr8:144537438(-) A-I      intronic
chr8:144537401(-) A-I      intronic
chr8:144536853(-) A-I      intronic
chr8:144536809(-) A-I      intronic
chr8:144536739(-) A-I      intronic
chr8:144536708(-) A-I      intronic
chr8:144536684(-) A-I      intronic
chr8:144536389(-) A-I      intronic
chr8:144536363(-) A-I      intronic
chr8:144536349(-) A-I      intronic
chr8:144536348(-) A-I      intronic
chr8:144533892(-) A-I      intronic
chr8:144533867(-) A-I      intronic
chr8:144533811(-) A-I      intronic
chr8:144533799(-) A-I      intronic
chr8:144532588(-) A-I      intronic
chr8:144532539(-) A-I      intronic
chr8:144532489(-) A-I      intronic
chr8:144532488(-) A-I      intronic
chr8:144536289(-) A-I      intronic
chr8:144533891(-) A-I      intronic
chr8:144531687(-) A-I      intronic
chr8:144538027(-) A-I      intronic
chr8:144535372(-) A-I      intronic
chr8:144537372(-) A-I      intronic
chr8:144535532(-) A-I      intronic
chr8:144525199(-) A-I      intronic
chr8:144536390(-) A-I      intronic
chr8:144616010(-) A-I      intronic
chr8:144538864(-) A-I      intronic
chr8:144616332(-) A-I      intronic
chr8:144538780(-) A-I      intronic
chr8:144532448(-) A-I      intronic
chr8:144537279(-) A-I      intronic
chr8:144537260(-) A-I      intronic
chr8:144525177(-) A-I      intronic
chr8:144616282(-) A-I      intronic
chr8:144532570(-) A-I      intronic
chr8:144525306(-) A-I      intronic
chr8:144527546(-) A-I      intronic
chr8:144532578(-) A-I      intronic
chr8:144537583(-) A-I      intronic
chr8:144530127(-) A-I      intronic
chr8:144615942(-) A-I      intronic
chr8:144536779(-) A-I      intronic
chr8:144530182(-) A-I      intronic
chr8:144532499(-) A-I      intronic
chr8:144542335(-) A-I      intronic
chr8:144616288(-) A-I      intronic
chr8:144536488(-) A-I      intronic
chr8:144527289(-) A-I      intronic
chr8:144532515(-) A-I      intronic
chr8:144536464(-) A-I      intronic
chr8:144535356(-) A-I      intronic
chr8:144616040(-) A-I      intronic
chr8:144526423(-) A-I      intronic
chr8:144537446(-) A-I      intronic
chr8:144535302(-) A-I      intronic
chr8:144616262(-) A-I      intronic
chr8:144616219(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZC3H3
chr8:144526423(-) A-G intron -    22484847
chr8:144527544(-) A-G intron -    22484847
chr8:144527545(-) A-G intron -    22484847
chr8:144527546(-) A-G intron -    22484847
chr8:144530182(-) A-G intron -    22484847
chr8:144530186(-) A-G intron -    22484847
chr8:144530291(-) A-G intron -    22484847
chr8:144531699(-) A-G intron -    22484847
chr8:144531760(-) A-G intron -    22484847
chr8:144531826(-) A-G intron -    22484847
chr8:144532479(-) A-G intron -    22484847
chr8:144532499(-) A-G intron -    22484847
chr8:144532515(-) A-G intron -    22484847
chr8:144532569(-) A-G intron -    22484847
chr8:144532570(-) A-G intron -    22484847
chr8:144532578(-) A-G intron -    22484847
chr8:144533964(-) T-C intron -    22484847
chr8:144535302(-) A-G intron -    22484847
chr8:144536700(-) A-G intron -    22484847
chr8:144536779(-) A-G intron -    22484847
chr8:144537260(-) A-G intron -    22484847
chr8:144537304(-) A-G intron -    22484847
chr8:144537362(-) A-G intron -    22484847
chr8:144537372(-) A-G intron -    22484847
chr8:144537437(-) A-G intron -    22484847
chr8:144537446(-) A-G intron -    22484847
chr8:144537583(-) A-G intron -    22484847
chr8:144537906(-) T-C intron -    22484847
chr8:144538839(-) A-G intron -    22484847
chr8:144538922(-) A-G intron -    22484847
chr8:144541643(-) A-G intron -    22484847
chr8:144616010(-) A-G intron -    22484847
chr8:144622543(-) G-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZC3H3
chr8:144520100-144520101(-) m6A 3'UTR       24284625//24981863//27773535//27371828
chr8:144520192-144520193(-) m6A 3'UTR       24981863//27773535//27371828
chr8:144520213-144520214(-) m6A 3'UTR       27773535
chr8:144520222-144520223(-) m6A 3'UTR       27773535
chr8:144520237-144520238(-) m6A CDS       27773535
chr8:144522215-144522216(-) m6A CDS       27773535
chr8:144523278-144523279(-) m6A CDS       -
chr8:144590045-144590046(-) m6A CDS       24284625
chr8:144618510-144618511(-) m6A CDS       24284625//27371828//27773536
chr8:144618550-144618551(-) m6A CDS       24284625//27371828//27773536
chr8:144618611-144618612(-) m6A CDS       24284625//27773535//27371828//27773536
chr8:144620236-144620237(-) m6A CDS       24284625//27773535//22575960
chr8:144620267-144620268(-) m6A CDS       24284625//27773535//22575960
chr8:144620279-144620280(-) m6A CDS       27773535
chr8:144620283-144620284(-) m6A CDS       24284625//22575960
chr8:144620331-144620332(-) m6A CDS       24284625//22575960
chr8:144620499-144620500(-) m6A CDS       24284625//27773535
chr8:144620610-144620611(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr8:144620629-144620630(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr8:144620672-144620673(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144620684-144620685(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144620751-144620752(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144620884-144620885(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr8:144620992-144620993(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22608085
chr8:144621029-144621030(-) m6A CDS       24284625//24209618//24981863//27371828
chr8:144621082-144621083(-) m6A CDS       24284625//24209618//27371828
chr8:144621152-144621153(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr8:144621197-144621198(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr8:144621282-144621283(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr8:144621290-144621291(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr8:144621469-144621470(-) m6A CDS       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZC3H3
Chromatin K562 cells     -
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2RC
Interactor2: ZC3H3

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid
Support Database VmiReg

Starting a new search, please wait ...