Basic Information:

  VIRBase ID:  

VHID00521214

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2RC:  MIMAT0012170          NME6:  NM_001308430     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2RC	NME6
miRBase Accession/Entrez ID	MIMAT0012170	10201
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IPIA-ALPHA//NDK 6//NM23-H6

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NME6	chr3:48337047(-) A-I      intronic chr3:48337295(-) A-I      intronic chr3:48342294(-) A-I      intronic chr3:48342452(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NME6	chr3:48342294(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NME6	chr3:48334755-48334756(-) m6A 3'UTR       24981863//22608085 chr3:48334783-48334784(-) m6A 3'UTR       24981863//22608085 chr3:48334792-48334793(-) m6A 3'UTR       24981863//22608085 chr3:48334801-48334802(-) m6A 3'UTR       24981863//22608085 chr3:48334815-48334816(-) m6A 3'UTR       24981863//22608085 chr3:48334866-48334867(-) m6A 3'UTR       22608085 chr3:48335245-48335246(-) m6A 3'UTR       27773535 chr3:48335274-48335275(-) m6A 3'UTR       27773535 chr3:48335304-48335305(-) m6A 3'UTR       27773535 chr3:48335393-48335394(-) m6A 3'UTR       27773535//22608085 chr3:48335456-48335457(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr3:48335530-48335531(-) m6A 3'UTR       24284625//24981863//27773535//27371828//22608085 chr3:48335660-48335661(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr3:48335756-48335757(-) m6A 3'UTR//exon       24284625//24981863//22608085 chr3:48335779-48335780(-) m6A 3'UTR//exon       24284625//24981863//22608085 chr3:48335893-48335894(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr3:48336010-48336011(-) Y 3'UTR//exon       26075521 chr3:48336054-48336055(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:48336067-48336068(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:48336081-48336082(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:48336092-48336093(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:48336110-48336111(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:48336135-48336136(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:48336149-48336150(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:48336237-48336238(-) m6A 3'UTR//CDS//exon       24284625//27371828 chr3:48338256-48338257(-) Gm CDS//exon//intron       - chr3:48339331-48339332(-) m6A exon//intron       25456834 chr3:48339393-48339394(-) m6A exon//intron       25456834 chr3:48339431-48339432(-) m6A exon//intron       25456834 chr3:48339475-48339476(-) m6A exon//intron       25456834 chr3:48341875-48341876(-) m6A 5'UTR//intron       27773535 chr3:48341884-48341885(-) m6A 5'UTR//intron       27773535 chr3:48342942-48342943(-) m6A 5'UTR       24981863 chr3:48342948-48342949(-) m6A 5'UTR       24981863 chr3:48343002-48343003(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NME6	Chromatin K562 cells     - Exosome Blood     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2RC
Interactor2: NME6

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg