Detail Information

Basic Information:


  VIRBase ID:  

VHID00520456

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2RC:           PPP3CA:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2RC PPP3CA
miRBase
Accession/Entrez ID		 MIMAT0012170 5530
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - ACCIID//CALN//CALNA//CALNA1//CCN1//CNA1//DEE91//IECEE//IECEE1//PPP2B

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PPP3CA
chr4:101956178(-) A-I      intronic
chr4:101956166(-) A-I      intronic
chr4:101956160(-) A-I      intronic
chr4:102115923(-) A-I      intronic
chr4:102115809(-) A-I      intronic
chr4:102073008(-) A-I      intronic
chr4:102072988(-) A-I      intronic
chr4:102072669(-) A-I      intronic
chr4:102072653(-) A-I      intronic
chr4:102072647(-) A-I      intronic
chr4:102026435(-) A-I      intronic
chr4:102026323(-) A-I      intronic
chr4:101994530(-) A-I      intronic
chr4:101964988(-) A-I      intronic
chr4:101964986(-) A-I      intronic
chr4:101956157(-) A-I      intronic
chr4:102112337(-) A-I      intronic
chr4:101956382(-) A-I      intronic
chr4:101962858(-) A-I      intronic
chr4:101962870(-) A-I      intronic
chr4:101964864(-) A-I      intronic
chr4:101964969(-) A-I      intronic
chr4:101978968(-) A-I      intronic
chr4:102230277(-) A-I      intronic
chr4:102243674(-) A-I      intronic
chr4:102243679(-) A-I      intronic
chr4:102116555(-) A-I      intronic
chr4:102243700(-) A-I      intronic
chr4:102243705(-) A-I      intronic
chr4:102243706(-) A-I      intronic
chr4:102245243(-) A-I      intronic
chr4:102255488(-) A-I      intronic
chr4:102255505(-) A-I      intronic
chr4:102255516(-) A-I      intronic
chr4:102125323(-) A-I      intronic
chr4:102230246(-) A-I      intronic
chr4:102230172(-) A-I      intronic
chr4:102229835(-) A-I      intronic
chr4:102229775(-) A-I      intronic
chr4:102229774(-) A-I      intronic
chr4:102229772(-) A-I      intronic
chr4:102229767(-) A-I      intronic
chr4:102229740(-) A-I      intronic
chr4:102229735(-) A-I      intronic
chr4:102229710(-) A-I      intronic
chr4:102195409(-) A-I      intronic
chr4:102195361(-) A-I      intronic
chr4:102195270(-) A-I      intronic
chr4:102194711(-) A-I      intronic
chr4:102194700(-) A-I      intronic
chr4:102194632(-) A-I      intronic
chr4:102194622(-) A-I      intronic
chr4:102162273(-) A-I      intronic
chr4:102116343(-) A-I      intronic
chr4:102116342(-) A-I      intronic
chr4:102116301(-) A-I      intronic
chr4:101962872(-) A-I      intronic
chr4:101965019(-) A-I      intronic
chr4:102245207(-) A-I      intronic
chr4:102255471(-) A-I      intronic
chr4:102245183(-) A-I      intronic
chr4:102245122(-) A-I      intronic
chr4:102245121(-) A-I      intronic
chr4:102243736(-) A-I      intronic
chr4:102168546(-) A-I      intronic
chr4:102168532(-) A-I      intronic
chr4:102168523(-) A-I      intronic
chr4:102168498(-) A-I      intronic
chr4:102168497(-) A-I      intronic
chr4:102125343(-) A-I      intronic
chr4:102125339(-) A-I      intronic
chr4:102125333(-) A-I      intronic
chr4:102125327(-) A-I      intronic
chr4:102116157(-) A-I      intronic
chr4:102125307(-) A-I      intronic
chr4:101962795(-) A-I      intronic
chr4:101962794(-) A-I      intronic
chr4:101962767(-) A-I      intronic
chr4:101962765(-) A-I      intronic
chr4:101962763(-) A-I      intronic
chr4:101962761(-) A-I      intronic
chr4:101962757(-) A-I      intronic
chr4:101956193(-) A-I      intronic
chr4:101956179(-) A-I      intronic
chr4:102125752(-) A-I      intronic
chr4:102234456(-) A-I      intronic
chr4:101962818(-) A-I      intronic
chr4:102245107(-) A-I      intronic
chr4:102162151(-) A-I      intronic
chr4:102029760(-) A-I      intronic
chr4:102229717(-) A-I      intronic
chr4:102213035(-) A-I      intronic
chr4:102125367(-) A-I      intronic
chr4:102255510(-) A-I      intronic
chr4:102186509(-) A-I      intronic
chr4:102221842(-) A-I      intronic
chr4:102186334(-) A-I      intronic
chr4:102125331(-) A-I      intronic
chr4:102254359(-) A-I      intronic
chr4:102168559(-) A-I      intronic
chr4:102220638(-) A-I      intronic
chr4:102072978(-) A-I      intronic
chr4:102195366(-) A-I      intronic
chr4:102072478(-) A-I      intronic
chr4:102221786(-) A-I      intronic
chr4:102027297(-) A-I      intronic
chr4:102243794(-) A-I      intronic
chr4:102213041(-) A-I      intronic
chr4:102232765(-) A-I      intronic
chr4:102125362(-) A-I      intronic
chr4:102027346(-) A-I      intronic
chr4:102044737(-) A-I      intronic
chr4:102255519(-) A-I      intronic
chr4:101962762(-) A-I      intronic
chr4:102243719(-) A-I      intronic
chr4:102243760(-) A-I      intronic
chr4:101993904(-) A-I      intronic
chr4:102195404(-) A-I      intronic
chr4:102222778(-) A-I      intronic
chr4:102026488(-) A-I      intronic
chr4:102116356(-) A-I      intronic
chr4:102194482(-) A-I      intronic
chr4:102254555(-) A-I      intronic
chr4:102124570(-) A-I      intronic
chr4:102229771(-) A-I      intronic
chr4:102230135(-) A-I      intronic
chr4:102195401(-) A-I      intronic
chr4:102222869(-) A-I      intronic
chr4:102027314(-) A-I      intronic
chr4:102067777(-) A-I      intronic
chr4:101962735(-) A-I      intronic
chr4:102027476(-) A-I      intronic
chr4:102067776(-) A-I      intronic
chr4:102220640(-) A-I      intronic
chr4:102257250(-) A-I      intronic
chr4:102194569(-) A-I      intronic
chr4:102257117(-) A-I      intronic
chr4:102245170(-) A-I      intronic
chr4:102026452(-) A-I      intronic
chr4:102245145(-) A-I      intronic
chr4:102243673(-) A-I      intronic
chr4:102243804(-) A-I      intronic
chr4:102027356(-) A-I      intronic
chr4:102220403(-) A-I      intronic
chr4:102163929(-) A-I      intronic
chr4:102230168(-) A-I      intronic
chr4:102168428(-) A-I      intronic
chr4:102115796(-) A-I      intronic
chr4:101956286(-) A-I      intronic
chr4:102230201(-) A-I      intronic
chr4:102026527(-) A-I      intronic
chr4:101994616(-) A-I      intronic
chr4:102027350(-) A-I      intronic
chr4:102072525(-) A-I      intronic
chr4:102072605(-) A-I      intronic
chr4:102243811(-) A-I      intronic
chr4:101962753(-) A-I      intronic
chr4:102194595(-) A-I      intronic
chr4:102125291(-) A-I      intronic
chr4:102254485(-) A-I      intronic
chr4:102072952(-) A-I      intronic
chr4:102116313(-) A-I      intronic
chr4:102245187(-) A-I      intronic
chr4:102254416(-) A-I      intronic
chr4:102115835(-) A-I      intronic
chr4:102116195(-) A-I      intronic
chr4:102083566(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PPP3CA
chr4:101964842(-) A-G intron -    22484847
chr4:102027366(-) A-G intron -    22484847
chr4:102072605(-) A-G intron -    22484847
chr4:102072952(-) A-G intron -    22484847
chr4:102115796(-) A-G intron -    22484847
chr4:102115999(-) A-G intron -    22484847
chr4:102116195(-) A-G intron -    22484847
chr4:102116356(-) A-G intron -    22484847
chr4:102116386(-) A-G intron -    22484847
chr4:102194595(-) A-G intron -    22484847
chr4:102195366(-) A-G intron -    22484847
chr4:102195401(-) A-G intron -    22484847
chr4:102229717(-) A-G intron -    22484847
chr4:102229741(-) A-G intron -    22484847
chr4:102229771(-) A-G intron -    22484847
chr4:102230208(-) A-G intron -    22484847
chr4:102243673(-) A-G intron -    22484847
chr4:102243811(-) A-G intron -    22484847
chr4:102245097(-) A-G intron -    22484847
chr4:102245104(-) A-G intron -    22484847
chr4:102245107(-) A-G intron -    22484847
chr4:102245170(-) A-G intron -    22484847
chr4:102245187(-) A-G intron -    22484847
chr4:102245194(-) A-G intron -    22484847
chr4:102245251(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PPP3CA
chr4:101946410-101946411(-) m6A 3'UTR       22608085
chr4:101946461-101946462(-) m6A 3'UTR       24981863//22608085
chr4:101946493-101946494(-) m6A 3'UTR       24981863//22608085
chr4:101946506-101946507(-) m6A 3'UTR       24981863//22608085
chr4:101946541-101946542(-) m6A 3'UTR       22608085
chr4:101946548-101946549(-) m6A 3'UTR       22608085
chr4:101946638-101946639(-) m6A 3'UTR       27773535
chr4:101946646-101946647(-) m6A 3'UTR       27773535
chr4:101946689-101946690(-) m6A 3'UTR       27773535
chr4:101946713-101946714(-) m6A 3'UTR       27773535
chr4:101946811-101946812(-) m6A 3'UTR       24981863//27773535
chr4:101946839-101946840(-) m6A 3'UTR       24981863//27773535
chr4:101947055-101947056(-) m6A CDS       24981863//27773535
chr4:101947068-101947069(-) m6A CDS       24981863//27773535
chr4:101947157-101947158(-) m6A CDS       27773535
chr4:102001757-102001758(-) m6A CDS//intron       27773535
chr4:102030215-102030216(-) m6A 3'UTR//5'UTR//CDS//exon//intron       27773535
chr4:102030225-102030226(-) m6A 3'UTR//5'UTR//CDS//exon//intron       27773535
chr4:102079385-102079386(-) m6A exon//intron       27773535
chr4:102268084-102268085(-) m6A 5'UTR//intron       24209618//25456834//24981863//27371828//27773536
chr4:102268247-102268248(-) m6A 5'UTR//intron       24209618//24981863//27773535
chr4:102268668-102268669(-) m6A 5'UTR//intron       24209618//25456834//24981863//27371828//27773536
chr4:102269430-102269431(-) m6A 5'UTR       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PPP3CA
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2RC
Interactor2: PPP3CA

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

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