Detail Information

Basic Information:


  VIRBase ID:  

VHID00513993

  Virus:  

Human herpesvirus 5 strain AD169

  Host:  

Homo sapiens

  Confidence Score:  

0.7311

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-1-5p:           SGPP1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-1-5p SGPP1
miRBase
Accession/Entrez ID
MIMAT0001581 81537
Organism Human herpesvirus 5 strain AD169 Homo sapiens
Category miRNA mRNA
Alias - SPP-1//SPPase1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SGPP1
chr14:64162485(-) A-I      intronic
chr14:64178580(-) A-I      intronic
chr14:64157573(-) A-I      intronic
chr14:64162481(-) A-I      intronic
chr14:64162480(-) A-I      intronic
chr14:64162474(-) A-I      intronic
chr14:64178593(-) A-I      intronic
chr14:64186722(-) A-I      intronic
chr14:64157561(-) A-I      intronic
chr14:64154101(-) A-I      intronic
chr14:64153996(-) A-I      intronic
chr14:64153955(-) A-I      intronic
chr14:64157534(-) A-I      intronic
chr14:64178626(-) A-I      intronic
chr14:64157526(-) A-I      intronic
chr14:64156904(-) A-I      intronic
chr14:64156879(-) A-I      intronic
chr14:64156841(-) A-I      intronic
chr14:64156427(-) A-I      intronic
chr14:64156386(-) A-I      intronic
chr14:64178599(-) A-I      intronic
chr14:64191981(-) A-I      intronic
chr14:64156463(-) A-I      intronic
chr14:64184962(-) A-I      intronic
chr14:64156890(-) A-I      intronic
chr14:64175913(-) A-I      intronic
chr14:64184866(-) A-I      intronic
chr14:64184801(-) A-I      intronic
chr14:64184269(-) A-I      intronic
chr14:64184266(-) A-I      intronic
chr14:64157040(-) A-I      intronic
chr14:64184235(-) A-I      intronic
chr14:64157603(-) A-I      intronic
chr14:64157627(-) A-I      intronic
chr14:64157660(-) A-I      intronic
chr14:64184217(-) A-I      intronic
chr14:64184204(-) A-I      intronic
chr14:64184168(-) A-I      intronic
chr14:64183692(-) A-I      intronic
chr14:64183550(-) A-I      intronic
chr14:64159750(-) A-I      intronic
chr14:64162386(-) A-I      intronic
chr14:64157724(-) A-I      intronic
chr14:64183540(-) A-I      intronic
chr14:64183504(-) A-I      intronic
chr14:64183130(-) A-I      intronic
chr14:64159269(-) A-I      intronic
chr14:64183112(-) A-I      intronic
chr14:64162504(-) A-I      intronic
chr14:64183100(-) A-I      intronic
chr14:64183049(-) A-I      intronic
chr14:64183402(-) A-I      intronic
chr14:64183046(-) A-I      intronic
chr14:64159373(-) A-I      intronic
chr14:64160507(-) A-I      intronic
chr14:64183029(-) A-I      intronic
chr14:64163604(-) A-I      intronic
chr14:64160897(-) A-I      intronic
chr14:64169345(-) A-I      intronic
chr14:64181371(-) A-I      intronic
chr14:64160986(-) A-I      intronic
chr14:64183020(-) A-I      intronic
chr14:64157597(-) A-I      intronic
chr14:64181713(-) A-I      intronic
chr14:64190337(-) A-I      intronic
chr14:64161913(-) A-I      intronic
chr14:64161935(-) A-I      intronic
chr14:64153924(-) A-I      intronic
chr14:64159863(-) A-I      intronic
chr14:64187220(-) A-I      intronic
chr14:64170308(-) A-I      intronic
chr14:64186588(-) A-I      intronic
chr14:64191993(-) A-I      intronic
chr14:64162387(-) A-I      intronic
chr14:64162450(-) A-I      intronic
chr14:64162513(-) A-I      intronic
chr14:64175047(-) A-I      intronic
chr14:64181708(-) A-I      intronic
chr14:64162546(-) A-I      intronic
chr14:64181687(-) A-I      intronic
chr14:64162607(-) A-I      intronic
chr14:64181610(-) A-I      intronic
chr14:64156872(-) A-I      intronic
chr14:64181314(-) A-I      intronic
chr14:64190797(-) A-I      intronic
chr14:64157496(-) A-I      intronic
chr14:64162623(-) A-I      intronic
chr14:64159807(-) A-I      intronic
chr14:64191946(-) A-I      intronic
chr14:64181259(-) A-I      intronic
chr14:64162749(-) A-I      intronic
chr14:64179553(-) A-I      intronic
chr14:64184245(-) A-I      intronic
chr14:64177970(-) A-I      intronic
chr14:64172380(-) A-I      intronic
chr14:64160591(-) A-I      intronic
chr14:64162776(-) A-I      intronic
chr14:64179742(-) A-I      intronic
chr14:64187314(-) A-I      intronic
chr14:64156886(-) A-I      intronic
chr14:64181562(-) A-I      intronic
chr14:64162788(-) A-I      intronic
chr14:64159845(-) A-I      intronic
chr14:64177928(-) A-I      intronic
chr14:64167934(-) A-I      intronic
chr14:64163603(-) A-I      intronic
chr14:64177909(-) A-I      intronic
chr14:64170724(-) A-I      intronic
chr14:64184312(-) A-I      intronic
chr14:64175102(-) A-I      intronic
chr14:64175992(-) A-I      intronic
chr14:64162801(-) A-I      intronic
chr14:64162836(-) A-I      intronic
chr14:64162917(-) A-I      intronic
chr14:64175178(-) A-I      intronic
chr14:64187808(-) A-I      intronic
chr14:64175106(-) A-I      intronic
chr14:64162837(-) A-I      intronic
chr14:64162860(-) A-I      intronic
chr14:64160755(-) A-I      intronic
chr14:64159306(-) A-I      intronic
chr14:64192030(-) A-I      intronic
chr14:64185892(-) A-I      intronic
chr14:64179421(-) A-I      intronic
chr14:64175082(-) A-I      intronic
chr14:64173697(-) A-I      intronic
chr14:64190271(-) A-I      intronic
chr14:64160407(-) A-I      intronic
chr14:64191984(-) A-I      intronic
chr14:64160929(-) A-I      intronic
chr14:64189127(-) A-I      intronic
chr14:64187697(-) A-I      intronic
chr14:64175079(-) A-I      intronic
chr14:64174365(-) A-I      intronic
chr14:64174321(-) A-I      intronic
chr14:64191969(-) A-I      intronic
chr14:64174284(-) A-I      intronic
chr14:64191961(-) A-I      intronic
chr14:64162894(-) A-I      intronic
chr14:64174281(-) A-I      intronic
chr14:64173721(-) A-I      intronic
chr14:64190802(-) A-I      intronic
chr14:64173715(-) A-I      intronic
chr14:64190771(-) A-I      intronic
chr14:64173707(-) A-I      intronic
chr14:64190770(-) A-I      intronic
chr14:64190763(-) A-I      intronic
chr14:64173698(-) A-I      intronic
chr14:64162941(-) A-I      intronic
chr14:64162961(-) A-I      intronic
chr14:64155507(-) A-I      intronic
chr14:64183643(-) A-I      intronic
chr14:64187356(-) A-I      intronic
chr14:64173679(-) A-I      intronic
chr14:64173598(-) A-I      intronic
chr14:64166866(-) A-I      intronic
chr14:64173595(-) A-I      intronic
chr14:64173588(-) A-I      intronic
chr14:64154119(-) A-I      intronic
chr14:64167761(-) A-I      intronic
chr14:64190742(-) A-I      intronic
chr14:64162930(-) A-I      intronic
chr14:64171843(-) A-I      intronic
chr14:64190893(-) A-I      intronic
chr14:64185939(-) A-I      intronic
chr14:64190631(-) A-I      intronic
chr14:64171782(-) A-I      intronic
chr14:64190693(-) A-I      intronic
chr14:64190626(-) A-I      intronic
chr14:64167796(-) A-I      intronic
chr14:64175238(-) A-I      intronic
chr14:64190374(-) A-I      intronic
chr14:64167827(-) A-I      intronic
chr14:64171317(-) A-I      intronic
chr14:64185942(-) A-I      intronic
chr14:64171750(-) A-I      intronic
chr14:64171737(-) A-I      intronic
chr14:64167845(-) A-I      intronic
chr14:64171723(-) A-I      intronic
chr14:64167861(-) A-I      intronic
chr14:64167866(-) A-I      intronic
chr14:64162395(-) A-I      intronic
chr14:64167904(-) A-I      intronic
chr14:64167925(-) A-I      intronic
chr14:64167942(-) A-I      intronic
chr14:64171388(-) A-I      intronic
chr14:64162849(-) A-I      intronic
chr14:64190380(-) A-I      intronic
chr14:64190257(-) A-I      intronic
chr14:64171376(-) A-I      intronic
chr14:64170836(-) A-I      intronic
chr14:64169216(-) A-I      intronic
chr14:64190254(-) A-I      intronic
chr14:64170794(-) A-I      intronic
chr14:64159328(-) A-I      intronic
chr14:64192010(-) A-I      intronic
chr14:64190245(-) A-I      intronic
chr14:64183090(-) A-I      intronic
chr14:64153993(-) A-I      intronic
chr14:64169224(-) A-I      intronic
chr14:64157567(-) A-I      intronic
chr14:64170758(-) A-I      intronic
chr14:64190825(-) A-I      intronic
chr14:64170324(-) A-I      intronic
chr14:64170199(-) A-I      intronic
chr14:64159340(-) A-I      intronic
chr14:64169225(-) A-I      intronic
chr14:64169352(-) A-I      intronic
chr14:64169365(-) A-I      intronic
chr14:64169366(-) A-I      intronic
chr14:64169371(-) A-I      intronic
chr14:64179416(-) A-I      intronic
chr14:64175196(-) A-I      intronic
chr14:64190204(-) A-I      intronic
chr14:64185924(-) A-I      intronic
chr14:64169382(-) A-I      intronic
chr14:64177951(-) A-I      intronic
chr14:64169426(-) A-I      intronic
chr14:64187260(-) A-I      intronic
chr14:64189646(-) A-I      intronic
chr14:64189643(-) A-I      intronic
chr14:64170138(-) A-I      intronic
chr14:64189614(-) A-I      intronic
chr14:64190724(-) A-I      intronic
chr14:64167921(-) A-I      intronic
chr14:64156258(-) A-I      intronic
chr14:64189595(-) A-I      intronic
chr14:64189566(-) A-I      intronic
chr14:64189454(-) A-I      intronic
chr14:64153933(-) A-I      intronic
chr14:64153936(-) A-I      intronic
chr14:64153937(-) A-I      intronic
chr14:64153941(-) A-I      intronic
chr14:64153967(-) A-I      intronic
chr14:64154011(-) A-I      intronic
chr14:64154047(-) A-I      intronic
chr14:64170817(-) A-I      intronic
chr14:64179501(-) A-I      intronic
chr14:64154050(-) A-I      intronic
chr14:64184313(-) A-I      intronic
chr14:64155453(-) A-I      intronic
chr14:64189121(-) A-I      intronic
chr14:64188998(-) A-I      intronic
chr14:64188105(-) A-I      intronic
chr14:64155478(-) A-I      intronic
chr14:64155516(-) A-I      intronic
chr14:64155523(-) A-I      intronic
chr14:64178543(-) A-I      intronic
chr14:64181818(-) A-I      intronic
chr14:64188080(-) A-I      intronic
chr14:64155551(-) A-I      intronic
chr14:64155596(-) A-I      intronic
chr14:64155620(-) A-I      intronic
chr14:64187778(-) A-I      intronic
chr14:64155634(-) A-I      intronic
chr14:64171696(-) A-I      intronic
chr14:64187776(-) A-I      intronic
chr14:64155644(-) A-I      intronic
chr14:64191971(-) A-I      intronic
chr14:64187714(-) A-I      intronic
chr14:64187415(-) A-I      intronic
chr14:64155668(-) A-I      intronic
chr14:64157675(-) A-I      intronic
chr14:64187396(-) A-I      intronic
chr14:64170622(-) A-I      intronic
chr14:64156083(-) A-I      intronic
chr14:64187346(-) A-I      intronic
chr14:64159821(-) A-I      intronic
chr14:64156121(-) A-I      intronic
chr14:64156298(-) A-I      intronic
chr14:64156349(-) A-I      intronic
chr14:64156352(-) A-I      intronic
chr14:64156374(-) A-I      intronic
chr14:64156395(-) A-I      intronic
chr14:64187218(-) A-I      intronic
chr14:64156407(-) A-I      intronic
chr14:64156431(-) A-I      intronic
chr14:64187214(-) A-I      intronic
chr14:64156446(-) A-I      intronic
chr14:64191898(-) A-I      intronic
chr14:64169381(-) A-I      intronic
chr14:64156271(-) A-I      intronic
chr14:64183181(-) A-I      intronic
chr14:64154095(-) A-I      intronic
chr14:64190887(-) A-I      intronic
chr14:64192009(-) A-I      intronic
chr14:64184880(-) A-I      intronic
chr14:64162896(-) A-I      intronic
chr14:64175195(-) A-I      intronic
chr14:64190698(-) A-I      intronic
chr14:64156116(-) A-I      intronic
chr14:64162622(-) A-I      intronic
chr14:64175176(-) A-I      intronic
chr14:64185927(-) A-I      intronic
chr14:64174436(-) A-I      intronic
chr14:64159265(-) A-I      intronic
chr14:64160945(-) A-I      intronic
chr14:64186963(-) A-I      intronic
chr14:64186758(-) A-I      intronic
chr14:64188102(-) A-I      intronic
chr14:64173535(-) A-I      intronic
chr14:64160447(-) A-I      intronic
chr14:64155502(-) A-I      intronic
chr14:64157592(-) A-I      intronic
chr14:64186901(-) A-I      intronic
chr14:64184221(-) A-I      intronic
chr14:64166819(-) A-I      intronic
chr14:64153971(-) A-I      intronic
chr14:64189262(-) A-I      intronic
chr14:64156484(-) A-I      intronic
chr14:64173678(-) A-I      intronic
chr14:64184137(-) A-I      intronic
chr14:64154114(-) A-I      intronic
chr14:64175900(-) A-I      intronic
chr14:64173558(-) A-I      intronic
chr14:64156469(-) A-I      intronic
chr14:64167920(-) A-I      intronic
chr14:64175066(-) A-I      intronic
chr14:64190354(-) A-I      intronic
chr14:64157606(-) A-I      intronic
chr14:64181988(-) A-I      intronic
chr14:64160405(-) A-I      intronic
chr14:64189044(-) A-I      intronic
chr14:64191653(-) A-I      intronic
chr14:64160892(-) A-I      intronic
chr14:64153902(-) A-I      intronic
chr14:64185883(-) A-I      intronic
chr14:64174437(-) A-I      intronic
chr14:64183575(-) A-I      intronic
chr14:64178531(-) A-I      intronic
chr14:64186911(-) A-I      intronic
chr14:64172355(-) A-I      intronic
chr14:64175227(-) A-I      intronic
chr14:64160448(-) A-I      intronic
chr14:64175970(-) A-I      intronic
chr14:64174319(-) A-I      intronic
chr14:64156896(-) A-I      intronic
chr14:64173726(-) A-I      intronic
chr14:64177960(-) A-I      intronic
chr14:64153896(-) A-I      intronic
chr14:64153914(-) A-I      intronic
chr14:64170636(-) A-I      intronic
chr14:64159342(-) A-I      intronic
chr14:64184074(-) A-I      intronic
chr14:64162394(-) A-I      intronic
chr14:64183549(-) A-I      intronic
chr14:64155614(-) A-I      intronic
chr14:64154028(-) A-I      intronic
chr14:64189578(-) A-I      intronic
chr14:64175185(-) A-I      intronic
chr14:64169255(-) A-I      intronic
chr14:64186762(-) A-I      intronic
chr14:64190305(-) A-I      intronic
chr14:64160935(-) A-I      intronic
chr14:64185774(-) A-I      intronic
chr14:64183103(-) A-I      intronic
chr14:64184854(-) A-I      intronic
chr14:64169262(-) A-I      intronic
chr14:64182006(-) A-I      intronic
chr14:64181277(-) A-I      intronic
chr14:64190830(-) A-I      intronic
chr14:64159389(-) A-I      intronic
chr14:64156392(-) A-I      intronic
chr14:64173712(-) A-I      intronic
chr14:64162629(-) A-I      intronic
chr14:64174383(-) A-I      intronic
chr14:64185773(-) A-I      intronic
chr14:64179552(-) A-I      intronic
chr14:64188062(-) A-I      intronic
chr14:64190325(-) A-I      intronic
chr14:64183604(-) A-I      intronic
chr14:64175901(-) A-I      intronic
chr14:64190760(-) A-I      intronic
chr14:64189607(-) A-I      intronic
chr14:64189654(-) A-I      intronic
chr14:64162971(-) A-I      intronic
chr14:64162561(-) A-I      intronic
chr14:64157525(-) A-I      intronic
chr14:64181124(-) A-I      intronic
chr14:64170772(-) A-I      intronic
chr14:64184136(-) A-I      intronic
chr14:64160421(-) A-I      intronic
chr14:64184792(-) A-I      intronic
chr14:64181541(-) A-I      intronic
chr14:64179759(-) A-I      intronic
chr14:64154136(-) A-I      intronic
chr14:64175919(-) A-I      intronic
chr14:64155578(-) A-I      intronic
chr14:64157646(-) A-I      intronic
chr14:64179478(-) A-I      intronic
chr14:64176040(-) A-I      intronic
chr14:64186732(-) A-I      intronic
chr14:64187739(-) A-I      intronic
chr14:64184178(-) A-I      intronic
chr14:64190315(-) A-I      intronic
chr14:64154002(-) A-I      intronic
chr14:64154899(-) A-I      intronic
chr14:64166743(-) A-I      intronic
chr14:64190764(-) A-I      intronic
chr14:64162463(-) A-I      intronic
chr14:64181835(-) A-I      intronic
chr14:64187732(-) A-I      intronic
chr14:64156149(-) A-I      intronic
chr14:64192016(-) A-I      intronic
chr14:64155536(-) A-I      intronic
chr14:64159436(-) A-I      intronic
chr14:64190865(-) A-I      intronic
chr14:64156120(-) A-I      intronic
chr14:64175045(-) A-I      intronic
chr14:64160909(-) A-I      intronic
chr14:64162503(-) A-I      intronic
chr14:64175002(-) A-I      intronic
chr14:64160739(-) A-I      intronic
chr14:64185889(-) A-I      intronic
chr14:64156979(-) A-I      intronic
chr14:64183351(-) A-I      intronic
chr14:64155477(-) A-I      intronic
chr14:64175224(-) A-I      intronic
chr14:64170796(-) A-I      intronic
chr14:64178600(-) A-I      intronic
chr14:64156468(-) A-I      intronic
chr14:64183329(-) A-I      intronic
chr14:64184930(-) A-I      intronic
chr14:64179743(-) A-I      intronic
chr14:64173661(-) A-I      intronic
chr14:64156351(-) A-I      intronic
chr14:64154076(-) A-I      intronic
chr14:64170782(-) A-I      intronic
chr14:64186002(-) A-I      intronic
chr14:64190721(-) A-I      intronic
chr14:64178556(-) A-I      intronic
chr14:64190638(-) A-I      intronic
chr14:64162577(-) A-I      intronic
chr14:64159443(-) A-I      intronic
chr14:64159445(-) A-I      intronic
chr14:64183143(-) A-I      intronic
chr14:64179415(-) A-I      intronic
chr14:64156089(-) A-I      intronic
chr14:64174410(-) A-I      intronic
chr14:64156988(-) A-I      intronic
chr14:64190182(-) A-I      intronic
chr14:64175111(-) A-I      intronic
chr14:64162400(-) A-I      intronic
chr14:64183063(-) A-I      intronic
chr14:64160741(-) A-I      intronic
chr14:64172372(-) A-I      intronic
chr14:64178530(-) A-I      intronic
chr14:64159924(-) A-I      intronic
chr14:64159702(-) A-I      intronic
chr14:64175112(-) A-I      intronic
chr14:64159332(-) A-I      intronic
chr14:64155568(-) A-I      intronic
chr14:64187395(-) A-I      intronic
chr14:64187873(-) A-I      intronic
chr14:64170826(-) A-I      intronic
chr14:64173645(-) A-I      intronic
chr14:64170284(-) A-I      intronic
chr14:64155711(-) A-I      intronic
chr14:64156402(-) A-I      intronic
chr14:64182982(-) A-I      intronic
chr14:64154075(-) A-I      intronic
chr14:64160511(-) A-I      intronic
chr14:64190814(-) A-I      intronic
chr14:64159811(-) A-I      intronic
chr14:64155604(-) A-I      intronic
chr14:64159425(-) A-I      intronic
chr14:64159222(-) A-I      intronic
chr14:64181700(-) A-I      intronic
chr14:64153954(-) A-I      intronic
chr14:64177965(-) A-I      intronic
chr14:64160970(-) A-I      intronic
chr14:64170288(-) A-I      intronic
chr14:64159236(-) A-I      intronic
chr14:64156414(-) A-I      intronic
chr14:64156882(-) A-I      intronic
chr14:64156978(-) A-I      intronic
chr14:64159854(-) A-I      intronic
chr14:64159369(-) A-I      intronic
chr14:64156954(-) A-I      intronic
chr14:64167790(-) A-I      intronic
chr14:64189590(-) A-I      intronic
chr14:64187712(-) A-I      intronic
chr14:64169420(-) A-I      intronic
chr14:64169210(-) A-I      intronic
chr14:64156432(-) A-I      intronic
chr14:64183032(-) A-I      intronic
chr14:64178498(-) A-I      intronic
chr14:64183104(-) A-I      intronic
chr14:64183605(-) A-I      intronic
chr14:64162897(-) A-I      intronic
chr14:64181870(-) A-I      intronic
chr14:64156285(-) A-I      intronic
chr14:64192006(-) A-I      intronic
chr14:64170688(-) A-I      intronic
chr14:64160826(-) A-I      intronic
chr14:64175177(-) A-I      intronic
chr14:64160880(-) A-I      intronic
chr14:64187308(-) A-I      intronic
chr14:64189581(-) A-I      intronic
chr14:64183129(-) A-I      intronic
chr14:64160566(-) A-I      intronic
chr14:64175071(-) A-I      intronic
chr14:64189676(-) A-I      intronic
chr14:64187232(-) A-I      intronic
chr14:64156914(-) A-I      intronic
chr14:64170744(-) A-I      intronic
chr14:64185877(-) A-I      intronic
chr14:64184172(-) A-I      intronic
chr14:64179761(-) A-I      intronic
chr14:64155545(-) A-I      intronic
chr14:64185861(-) A-I      intronic
chr14:64157712(-) A-I      intronic
chr14:64155537(-) A-I      intronic
chr14:64154065(-) A-I      intronic
chr14:64159260(-) A-I      intronic
chr14:64157706(-) A-I      intronic
chr14:64170690(-) A-I      intronic
chr14:64175980(-) A-I      intronic
chr14:64159339(-) A-I      intronic
chr14:64170818(-) A-I      intronic
chr14:64187749(-) A-I      intronic
chr14:64188040(-) A-I      intronic
chr14:64187774(-) A-I      intronic
chr14:64153987(-) A-I      intronic
chr14:64179549(-) A-I      intronic
chr14:64162426(-) A-I      intronic
chr14:64159917(-) A-I      intronic
chr14:64185822(-) A-I      intronic
chr14:64179483(-) A-I      intronic
chr14:64185842(-) A-I      intronic
chr14:64154089(-) A-I      intronic
chr14:64187285(-) A-I      intronic
chr14:64159923(-) A-I      intronic
chr14:64156270(-) A-I      intronic
chr14:64166778(-) A-I      intronic
chr14:64183657(-) A-I      intronic
chr14:64185995(-) A-I      intronic
chr14:64170191(-) A-I      intronic
chr14:64181896(-) A-I      intronic
chr14:64178582(-) A-I      intronic
chr14:64187765(-) A-I      intronic
chr14:64170682(-) A-I      intronic
chr14:64185857(-) A-I      intronic
chr14:64160583(-) A-I      intronic
chr14:64154019(-) A-I      intronic
chr14:64170723(-) A-I      intronic
chr14:64176010(-) A-I      intronic
chr14:64190289(-) A-I      intronic
chr14:64183683(-) A-I      intronic
chr14:64169414(-) A-I      intronic
chr14:64171323(-) A-I      intronic
chr14:64188067(-) A-I      intronic
chr14:64157557(-) A-I      intronic
chr14:64157514(-) A-I      intronic
chr14:64157612(-) A-I      intronic
chr14:64188079(-) A-I      intronic
chr14:64179572(-) A-I      intronic
chr14:64192035(-) A-I      intronic
chr14:64155623(-) A-I      intronic
chr14:64183544(-) A-I      intronic
chr14:64156452(-) A-I      intronic
chr14:64176009(-) A-I      intronic
chr14:64155712(-) A-I      intronic
chr14:64160504(-) A-I      intronic
chr14:64183064(-) A-I      intronic
chr14:64154010(-) A-I      intronic
chr14:64152514(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SGPP1
chr14:64152514(-) A-I exon 3'UTR    22327324
chr14:64156270(-) A-I intron -    22327324
chr14:64156484(-) A-I intron -    22327324
chr14:64156896(-) A-I intron -    22327324
chr14:64162395(-) A-I intron -    22327324
chr14:64190734(-) A-I intron -    22327324
chr14:64181124(-) A-G intron -    22484847
chr14:64154002(-) A-G intron -    22484847
chr14:64154136(-) A-G intron -    22484847
chr14:64155502(-) A-G intron -    22484847
chr14:64156120(-) A-G intron -    22484847
chr14:64156484(-) A-G intron -    22484847
chr14:64156886(-) A-G intron -    22484847
chr14:64156896(-) A-G intron -    22484847
chr14:64156954(-) A-G intron -    22484847
chr14:64159260(-) A-G intron -    22484847
chr14:64160583(-) A-G intron -    22484847
chr14:64160929(-) A-G intron -    22484847
chr14:64160970(-) A-G intron -    22484847
chr14:64162395(-) A-G intron -    22484847
chr14:64162629(-) A-G intron -    22484847
chr14:64166743(-) A-G intron -    22484847
chr14:64179415(-) A-G intron -    22484847
chr14:64181700(-) A-G intron -    22484847
chr14:64181818(-) A-G intron -    22484847
chr14:64181988(-) A-G intron -    22484847
chr14:64183549(-) A-G intron -    22484847
chr14:64184221(-) A-G intron -    22484847
chr14:64190797(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SGPP1
chr14:64152912-64152913(-) m6A CDS       22608085
chr14:64152930-64152931(-) m6A CDS       22608085
chr14:64153195-64153196(-) m6A CDS       24284625//24209618//24981863//22608085
chr14:64153289-64153290(-) m6A CDS       24284625//24981863
chr14:64153312-64153313(-) m6A CDS       24284625//24981863
chr14:64165358-64165359(-) m6A CDS       24284625//24209618//24981863
chr14:64194126-64194127(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr14:64194195-64194196(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr14:64194201-64194202(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr14:64194239-64194240(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr14:64194507-64194508(-) m6A CDS       25456834//27371828//27773536
chr14:64194549-64194550(-) m6A CDS       24284625//25456834//24981863//27371828//27773536
chr14:64194615-64194616(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536
chr14:64194714-64194715(-) m6A 5'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SGPP1
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleus HeLa-S3 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-1-5p
Interactor2: SGPP1

Evidence Support:


Strong-Evidence RISC-IP
Support Database ViRBase

References:


PMID 20585629 Target region 5'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line HEK293 cells Interactor2 expression None
Description Here, we identify cellular transcript targets of one of the most highly expressed HCMV encoded miRNAs, miR-US25-1, using a recently developed biochemical approach called RISC immunoprecipitation. Strikingly, the majority of identified transcripts contained miR-US25-1 target sites within the 5'UTR rather than the 3'UTR.

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