Basic Information:

  VIRBase ID:  

VHID00512228

  Virus:  

Human herpesvirus 5 strain AD169

  Host:  

Homo sapiens

  Confidence Score:  

0.7311

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-1-5p:  MIMAT0001581          WDR45B:  NM_019613     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-1-5p	WDR45B
miRBase Accession/Entrez ID	MIMAT0001581	56270
Organism	Human herpesvirus 5 strain AD169	Homo sapiens
Category	miRNA	mRNA
Alias	-	NEDSBAS//WDR45L//WIPI-3//WIPI3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	WDR45B	chr17:80584192(-) A-I      intronic chr17:80576489(-) A-I      intronic chr17:80582332(-) A-I      intronic chr17:80578208(-) A-I      intronic chr17:80576481(-) A-I      intronic chr17:80582278(-) A-I      intronic chr17:80600529(-) A-I      intronic chr17:80576246(-) A-I      intronic chr17:80581488(-) A-I      intronic chr17:80584155(-) A-I      intronic chr17:80576531(-) A-I      intronic chr17:80584287(-) A-I      intronic chr17:80586047(-) A-I      intronic chr17:80586434(-) A-I      intronic chr17:80586799(-) A-I      intronic chr17:80589742(-) A-I      intronic chr17:80590800(-) A-I      intronic chr17:80576513(-) A-I      intronic chr17:80585941(-) A-I      intronic chr17:80598415(-) A-I      intronic chr17:80584381(-) A-I      intronic chr17:80576501(-) A-I      intronic chr17:80585952(-) A-I      intronic chr17:80599591(-) A-I      intronic chr17:80599711(-) A-I      intronic chr17:80599736(-) A-I      intronic chr17:80601092(-) A-I      intronic chr17:80601117(-) A-I      intronic chr17:80601160(-) A-I      intronic chr17:80601161(-) A-I      intronic chr17:80601197(-) A-I      intronic chr17:80601226(-) A-I      intronic chr17:80601227(-) A-I      intronic chr17:80601270(-) A-I      intronic chr17:80575970(-) A-I      intronic chr17:80575983(-) A-I      intronic chr17:80575988(-) A-I      intronic chr17:80576000(-) A-I      intronic chr17:80576043(-) A-I      intronic chr17:80576062(-) A-I      intronic chr17:80578130(-) A-I      intronic chr17:80578137(-) A-I      intronic chr17:80578147(-) A-I      intronic chr17:80578162(-) A-I      intronic chr17:80578186(-) A-I      intronic chr17:80578252(-) A-I      intronic chr17:80578257(-) A-I      intronic chr17:80579041(-) A-I      intronic chr17:80579074(-) A-I      intronic chr17:80579134(-) A-I      intronic chr17:80579224(-) A-I      intronic chr17:80580420(-) A-I      intronic chr17:80580430(-) A-I      intronic chr17:80580437(-) A-I      intronic chr17:80580457(-) A-I      intronic chr17:80580473(-) A-I      intronic chr17:80580483(-) A-I      intronic chr17:80580505(-) A-I      intronic chr17:80580523(-) A-I      intronic chr17:80580545(-) A-I      intronic chr17:80580559(-) A-I      intronic chr17:80581025(-) A-I      intronic chr17:80581065(-) A-I      intronic chr17:80581139(-) A-I      intronic chr17:80581155(-) A-I      intronic chr17:80581181(-) A-I      intronic chr17:80581211(-) A-I      intronic chr17:80581225(-) A-I      intronic chr17:80581259(-) A-I      intronic chr17:80581261(-) A-I      intronic chr17:80581450(-) A-I      intronic chr17:80581512(-) A-I      intronic chr17:80582205(-) A-I      intronic chr17:80582249(-) A-I      intronic chr17:80582317(-) A-I      intronic chr17:80582387(-) A-I      intronic chr17:80583818(-) A-I      intronic chr17:80583864(-) A-I      intronic chr17:80583883(-) A-I      intronic chr17:80583905(-) A-I      intronic chr17:80583923(-) A-I      intronic chr17:80583927(-) A-I      intronic chr17:80583932(-) A-I      intronic chr17:80583947(-) A-I      intronic chr17:80583952(-) A-I      intronic chr17:80583953(-) A-I      intronic chr17:80583958(-) A-I      intronic chr17:80583962(-) A-I      intronic chr17:80583991(-) A-I      intronic chr17:80584003(-) A-I      intronic chr17:80584024(-) A-I      intronic chr17:80584195(-) A-I      intronic chr17:80584232(-) A-I      intronic chr17:80584244(-) A-I      intronic chr17:80584273(-) A-I      intronic chr17:80584362(-) A-I      intronic chr17:80584371(-) A-I      intronic chr17:80586048(-) A-I      intronic chr17:80586150(-) A-I      intronic chr17:80586617(-) A-I      intronic chr17:80586775(-) A-I      intronic chr17:80589217(-) A-I      intronic chr17:80589249(-) A-I      intronic chr17:80589293(-) A-I      intronic chr17:80589298(-) A-I      intronic chr17:80589343(-) A-I      intronic chr17:80589428(-) A-I      intronic chr17:80589756(-) A-I      intronic chr17:80589764(-) A-I      intronic chr17:80589787(-) A-I      intronic chr17:80589791(-) A-I      intronic chr17:80589792(-) A-I      intronic chr17:80589793(-) A-I      intronic chr17:80589796(-) A-I      intronic chr17:80589839(-) A-I      intronic chr17:80589910(-) A-I      intronic chr17:80590315(-) A-I      intronic chr17:80590318(-) A-I      intronic chr17:80590647(-) A-I      intronic chr17:80590890(-) A-I      intronic chr17:80590899(-) A-I      intronic chr17:80590976(-) A-I      intronic chr17:80591648(-) A-I      intronic chr17:80591927(-) A-I      intronic chr17:80592181(-) A-I      intronic chr17:80592278(-) A-I      intronic chr17:80593430(-) A-I      intronic chr17:80593588(-) A-I      intronic chr17:80593590(-) A-I      intronic chr17:80593906(-) A-I      intronic chr17:80593925(-) A-I      intronic chr17:80593950(-) A-I      intronic chr17:80593977(-) A-I      intronic chr17:80595775(-) A-I      intronic chr17:80595938(-) A-I      intronic chr17:80595943(-) A-I      intronic chr17:80595950(-) A-I      intronic chr17:80595953(-) A-I      intronic chr17:80595954(-) A-I      intronic chr17:80596801(-) A-I      intronic chr17:80596820(-) A-I      intronic chr17:80596827(-) A-I      intronic chr17:80596831(-) A-I      intronic chr17:80596837(-) A-I      intronic chr17:80596855(-) A-I      intronic chr17:80596867(-) A-I      intronic chr17:80596871(-) A-I      intronic chr17:80596872(-) A-I      intronic chr17:80596894(-) A-I      intronic chr17:80596900(-) A-I      intronic chr17:80596902(-) A-I      intronic chr17:80596926(-) A-I      intronic chr17:80598342(-) A-I      intronic chr17:80599010(-) A-I      intronic chr17:80599025(-) A-I      intronic chr17:80599031(-) A-I      intronic chr17:80599044(-) A-I      intronic chr17:80599067(-) A-I      intronic chr17:80599088(-) A-I      intronic chr17:80599528(-) A-I      intronic chr17:80595999(-) A-I      intronic chr17:80580488(-) A-I      intronic chr17:80589317(-) A-I      intronic chr17:80589340(-) A-I      intronic chr17:80582341(-) A-I      intronic chr17:80590207(-) A-I      intronic chr17:80589232(-) A-I      intronic chr17:80582308(-) A-I      intronic chr17:80590198(-) A-I      intronic chr17:80584048(-) A-I      intronic chr17:80590239(-) A-I      intronic chr17:80590687(-) A-I      intronic chr17:80576001(-) A-I      intronic chr17:80578144(-) A-I      intronic chr17:80589870(-) A-I      intronic chr17:80596045(-) A-I      intronic chr17:80589189(-) A-I      intronic chr17:80601246(-) A-I      intronic chr17:80582326(-) A-I      intronic chr17:80582525(-) A-I      intronic chr17:80578226(-) A-I      intronic chr17:80589236(-) A-I      intronic chr17:80590293(-) A-I      intronic chr17:80591686(-) A-I      intronic chr17:80579103(-) A-I      intronic chr17:80590859(-) A-I      intronic chr17:80598454(-) A-I      intronic chr17:80586521(-) A-I      intronic chr17:80595980(-) A-I      intronic chr17:80595858(-) A-I      intronic chr17:80590170(-) A-I      intronic chr17:80589857(-) A-I      intronic chr17:80592216(-) A-I      intronic chr17:80586446(-) A-I      intronic chr17:80586392(-) A-I      intronic chr17:80580441(-) A-I      intronic chr17:80592242(-) A-I      intronic chr17:80581024(-) A-I      intronic chr17:80589834(-) A-I      intronic chr17:80589275(-) A-I      intronic chr17:80599529(-) A-I      intronic chr17:80593851(-) A-I      intronic chr17:80589299(-) A-I      intronic chr17:80579124(-) A-I      intronic chr17:80589434(-) A-I      intronic chr17:80584323(-) A-I      intronic chr17:80578271(-) A-I      intronic chr17:80576550(-) A-I      intronic chr17:80586020(-) A-I      intronic chr17:80575902(-) A-I      intronic chr17:80599662(-) A-I      intronic chr17:80599013(-) A-I      intronic chr17:80586370(-) A-I      intronic chr17:80590788(-) A-I      intronic chr17:80584272(-) A-I      intronic chr17:80593581(-) A-I      intronic chr17:80581180(-) A-I      intronic chr17:80591687(-) A-I      intronic chr17:80592201(-) A-I      intronic chr17:80581410(-) A-I      intronic chr17:80576465(-) A-I      intronic chr17:80586870(-) A-I      intronic chr17:80590275(-) A-I      intronic chr17:80576603(-) A-I      intronic chr17:80601104(-) A-I      intronic chr17:80590299(-) A-I      intronic chr17:80590882(-) A-I      intronic chr17:80593739(-) A-I      intronic chr17:80583828(-) A-I      intronic chr17:80586671(-) A-I      intronic chr17:80584249(-) A-I      intronic chr17:80586535(-) A-I      intronic chr17:80575934(-) A-I      intronic chr17:80584170(-) A-I      intronic chr17:80586793(-) A-I      intronic chr17:80579032(-) A-I      intronic chr17:80586094(-) A-I      intronic chr17:80581141(-) A-I      intronic chr17:80585953(-) A-I      intronic chr17:80581151(-) A-I      intronic chr17:80581216(-) A-I      intronic chr17:80578283(-) A-I      intronic chr17:80582331(-) A-I      intronic chr17:80586062(-) A-I      intronic chr17:80589256(-) A-I      intronic chr17:80578098(-) A-I      intronic chr17:80578222(-) A-I      intronic chr17:80578307(-) A-I      intronic chr17:80598980(-) A-I      intronic chr17:80579157(-) A-I      intronic chr17:80599516(-) A-I      intronic chr17:80584289(-) A-I      intronic chr17:80598355(-) A-I      intronic chr17:80598426(-) A-I      intronic chr17:80592693(-) A-I      intronic chr17:80589411(-) A-I      intronic chr17:80586051(-) A-I      intronic chr17:80589802(-) A-I      intronic chr17:80593807(-) A-I      intronic chr17:80581419(-) A-I      intronic chr17:80586124(-) A-I      intronic chr17:80576491(-) A-I      intronic chr17:80584357(-) A-I      intronic chr17:80580489(-) A-I      intronic chr17:80589325(-) A-I      intronic chr17:80580498(-) A-I      intronic chr17:80595893(-) A-I      intronic chr17:80595845(-) A-I      intronic chr17:80578197(-) A-I      intronic chr17:80590322(-) A-I      intronic chr17:80583856(-) A-I      intronic chr17:80591634(-) A-I      intronic chr17:80584365(-) A-I      intronic chr17:80584157(-) A-I      intronic chr17:80586619(-) A-I      intronic chr17:80575881(-) A-I      intronic chr17:80589102(-) A-I      intronic chr17:80584327(-) A-I      intronic chr17:80586111(-) A-I      intronic chr17:80579068(-) A-I      intronic chr17:80596005(-) A-I      intronic chr17:80598986(-) A-I      intronic chr17:80598506(-) A-I      intronic chr17:80593932(-) A-I      intronic chr17:80581100(-) A-I      intronic chr17:80581547(-) A-I      intronic chr17:80582766(-) A-I      intronic chr17:80599006(-) A-I      intronic chr17:80585937(-) A-I      intronic chr17:80586409(-) A-I      intronic chr17:80586358(-) A-I      intronic chr17:80582276(-) A-I      intronic chr17:80590202(-) A-I      intronic chr17:80582767(-) A-I      intronic chr17:80581572(-) A-I      intronic chr17:80581097(-) A-I      intronic chr17:80595861(-) A-I      intronic chr17:80593759(-) A-I      intronic chr17:80580542(-) A-I      intronic chr17:80595870(-) A-I      intronic chr17:80584346(-) A-I      intronic chr17:80581498(-) A-I      intronic chr17:80592362(-) A-I      intronic chr17:80584179(-) A-I      intronic chr17:80601054(-) A-I      intronic chr17:80590891(-) A-I      intronic chr17:80586788(-) A-I      intronic chr17:80579098(-) A-I      intronic chr17:80586057(-) A-I      intronic chr17:80586567(-) A-I      intronic chr17:80586819(-) A-I      intronic chr17:80590810(-) A-I      intronic chr17:80583833(-) A-I      intronic chr17:80590176(-) A-I      intronic chr17:80579146(-) A-I      intronic chr17:80598940(-) A-I      intronic chr17:80593880(-) A-I      intronic chr17:80583850(-) A-I      intronic chr17:80580558(-) A-I      intronic chr17:80595922(-) A-I      intronic chr17:80590993(-) A-I      intronic chr17:80586673(-) A-I      intronic chr17:80580447(-) A-I      intronic chr17:80601252(-) A-I      intronic chr17:80576464(-) A-I      intronic chr17:80599605(-) A-I      intronic chr17:80585989(-) A-I      intronic chr17:80583935(-) A-I      intronic chr17:80601187(-) A-I      intronic chr17:80581452(-) A-I      intronic chr17:80583897(-) A-I      intronic chr17:80586045(-) A-I      intronic chr17:80598420(-) A-I      intronic chr17:80586096(-) A-I      intronic chr17:80579123(-) A-I      intronic chr17:80575944(-) A-I      intronic chr17:80596969(-) A-I      intronic chr17:80593694(-) A-I      intronic chr17:80590166(-) A-I      intronic chr17:80576530(-) A-I      intronic chr17:80584029(-) A-I      intronic chr17:80593881(-) A-I      intronic chr17:80579133(-) A-I      intronic chr17:80595887(-) A-I      intronic chr17:80590270(-) A-I      intronic chr17:80589407(-) A-I      intronic chr17:80584030(-) A-I      intronic chr17:80583887(-) A-I      intronic chr17:80578942(-) A-I      intronic chr17:80599085(-) A-I      intronic chr17:80595793(-) A-I      intronic chr17:80581064(-) A-I      intronic chr17:80598292(-) A-I      intronic chr17:80584326(-) A-I      intronic chr17:80585902(-) A-I      intronic chr17:80585901(-) A-I      intronic chr17:80579181(-) A-I      intronic chr17:80582302(-) A-I      intronic chr17:80592192(-) A-I      intronic chr17:80595460(-) A-I      intronic chr17:80586065(-) A-I      intronic chr17:80579176(-) A-I      intronic chr17:80586631(-) A-I      intronic chr17:80586025(-) A-I      intronic chr17:80595940(-) A-I      intronic chr17:80583896(-) A-I      intronic chr17:80581479(-) A-I      intronic chr17:80579058(-) A-I      intronic chr17:80578182(-) A-I      intronic chr17:80582386(-) A-I      intronic chr17:80591832(-) A-I      intronic chr17:80589360(-) A-I      intronic chr17:80586158(-) A-I      intronic chr17:80593862(-) A-I      intronic chr17:80595979(-) A-I      intronic chr17:80590956(-) A-I      intronic chr17:80580580(-) A-I      intronic chr17:80601105(-) A-I      intronic chr17:80586601(-) A-I      intronic chr17:80580480(-) A-I      intronic chr17:80578937(-) A-I      intronic chr17:80584246(-) A-I      intronic chr17:80586371(-) A-I      intronic chr17:80584383(-) A-I      intronic chr17:80578997(-) A-I      intronic chr17:80593500(-) A-I      intronic chr17:80590242(-) A-I      intronic chr17:80586148(-) A-I      intronic chr17:80595867(-) A-I      intronic chr17:80586710(-) A-I      intronic chr17:80590153(-) A-I      intronic chr17:80601185(-) A-I      intronic chr17:80576079(-) A-I      intronic chr17:80576095(-) A-I      intronic chr17:80582266(-) A-I      intronic chr17:80575931(-) A-I      intronic chr17:80584148(-) A-I      intronic chr17:80586007(-) A-I      intronic chr17:80575843(-) A-I      intronic chr17:80596943(-) A-I      intronic chr17:80579218(-) A-I      intronic chr17:80593798(-) A-I      intronic chr17:80584281(-) A-I      intronic chr17:80586842(-) A-I      intronic chr17:80586093(-) A-I      intronic chr17:80582578(-) A-I      intronic chr17:80585904(-) A-I      intronic chr17:80584402(-) A-I      intronic chr17:80599692(-) A-I      intronic chr17:80586142(-) A-I      intronic chr17:80584299(-) A-I      intronic chr17:80584240(-) A-I      intronic chr17:80581011(-) A-I      intronic chr17:80586713(-) A-I      intronic chr17:80595884(-) A-I      intronic chr17:80586736(-) A-I      intronic chr17:80579100(-) A-I      intronic chr17:80580487(-) A-I      intronic chr17:80590873(-) A-I      intronic chr17:80590135(-) A-I      intronic chr17:80576475(-) A-I      intronic chr17:80599461(-) A-I      intronic chr17:80583855(-) A-I      intronic chr17:80590152(-) A-I      intronic chr17:80592281(-) A-I      intronic chr17:80600458(-) A-I      intronic chr17:80578984(-) A-I      intronic chr17:80585936(-) A-I      intronic chr17:80589097(-) A-I      intronic chr17:80581428(-) A-I      intronic chr17:80595380(-) A-I      intronic chr17:80586101(-) A-I      intronic chr17:80584169(-) A-I      intronic chr17:80586106(-) A-I      intronic chr17:80582425(-) A-I      intronic chr17:80582311(-) A-I      intronic chr17:80599416(-) A-I      intronic chr17:80585870(-) A-I      intronic chr17:80595457(-) A-I      intronic chr17:80579203(-) A-I      intronic chr17:80586396(-) A-I      intronic chr17:80581023(-) A-I      intronic chr17:80599473(-) A-I      intronic chr17:80589934(-) A-I      intronic chr17:80595478(-) A-I      intronic chr17:80595705(-) A-I      intronic chr17:80599583(-) A-I      intronic chr17:80584255(-) A-I      intronic chr17:80592689(-) A-I      intronic chr17:80600541(-) A-I      intronic chr17:80586133(-) A-I      intronic chr17:80590738(-) A-I      intronic chr17:80589292(-) A-I      intronic chr17:80590982(-) A-I      intronic chr17:80590827(-) A-I      intronic chr17:80581462(-) A-I      intronic chr17:80575984(-) A-I      intronic chr17:80580342(-) A-I      intronic chr17:80580405(-) A-I      intronic chr17:80597047(-) A-I      intronic chr17:80578075(-) A-I      intronic chr17:80600457(-) A-I      intronic chr17:80586838(-) A-I      intronic chr17:80592252(-) A-I      intronic chr17:80590324(-) A-I      intronic chr17:80595760(-) A-I      intronic chr17:80595639(-) A-I      intronic chr17:80595351(-) A-I      intronic chr17:80591076(-) A-I      intronic chr17:80590201(-) A-I      intronic chr17:80580371(-) A-I      intronic chr17:80595368(-) A-I      intronic chr17:80596970(-) A-I      intronic chr17:80589836(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	WDR45B	chr17:80572952-80572953(-) m6A 3'UTR//intron       24284625//24981863//26404942//27773535//22575960//22608085 chr17:80572970-80572971(-) m6A 3'UTR//intron       24284625//24981863//26404942//27773535//22575960//22608085 chr17:80572977-80572978(-) m6A 3'UTR//intron       24284625//24981863//26404942//27773535//22575960//22608085 chr17:80572996-80572997(-) m6A 3'UTR//intron       24284625//24981863//26404942//27773535//22575960//22608085 chr17:80573022-80573023(-) m6A 3'UTR//intron       24284625//24981863//26404942//27773535//22575960//22608085 chr17:80573110-80573111(-) m6A 3'UTR//intron       24284625//27773535 chr17:80573250-80573251(-) m6A 3'UTR//intron       24284625//24209618//27773535 chr17:80573284-80573285(-) m6A 3'UTR//intron       24284625//24209618//27773535 chr17:80573383-80573384(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:80573466-80573467(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr17:80573474-80573475(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr17:80573640-80573641(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr17:80573683-80573684(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr17:80573749-80573750(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:80576953-80576954(-) m6A 3'UTR//CDS//exon       27773535 chr17:80579510-80579511(-) m6A 3'UTR//CDS//exon       27773535 chr17:80579563-80579564(-) m6A 3'UTR//CDS//exon       27773535 chr17:80579593-80579594(-) m6A 3'UTR//CDS//exon       27773535 chr17:80594414-80594415(-) m6A exon//intron       27773535 chr17:80601828-80601829(-) m6A CDS//exon       27773535//27371828 chr17:80606154-80606155(-) m6A CDS//exon       24284625//24981863//27371828//27773536//22575960 chr17:80606211-80606212(-) m6A CDS//exon       24284625//24209618//24981863//27371828//27773536 chr17:80606281-80606282(-) m6A 5'UTR//exon       24284625//24209618//24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	WDR45B	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-1-5p
Interactor2: WDR45B

Evidence Support:

Strong-Evidence	RISC-IP
Support Database	ViRBase

References:

PMID	20585629	Target region	5'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	HEK293 cells	Interactor2 expression	None
Description	Here, we identify cellular transcript targets of one of the most highly expressed HCMV encoded miRNAs, miR-US25-1, using a recently developed biochemical approach called RISC immunoprecipitation. Strikingly, the majority of identified transcripts contained miR-US25-1 target sites within the 5'UTR rather than the 3'UTR.