Basic Information:

  VIRBase ID:  

VHID00510630

  Virus:  

Human herpesvirus 5 strain AD169

  Host:  

Homo sapiens

  Confidence Score:  

0.7311

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-1-5p:  MIMAT0001581          TXNDC11:  NR_136674     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-1-5p	TXNDC11
miRBase Accession/Entrez ID	MIMAT0001581	51061
Organism	Human herpesvirus 5 strain AD169	Homo sapiens
Category	miRNA	mRNA
Alias	-	EFP1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TXNDC11	chr16:11814477(-) A-I      3'UTR chr16:11806950(-) A-I      intronic chr16:11803220(-) A-I      intronic chr16:11835767(-) A-I      intronic chr16:11807994(-) A-I      intronic chr16:11774793(-) A-I      intronic chr16:11774857(-) A-I      intronic chr16:11774928(-) A-I      intronic chr16:11814471(-) A-I      3'UTR chr16:11814440(-) A-I      3'UTR chr16:11814452(-) A-I      3'UTR chr16:11814450(-) A-I      3'UTR chr16:11814442(-) A-I      3'UTR chr16:11801871(-) A-I      intronic chr16:11814476(-) A-I      3'UTR chr16:11801695(-) A-I      intronic chr16:11801704(-) A-I      intronic chr16:11798889(-) A-I      intronic chr16:11807982(-) A-I      intronic chr16:11815026(-) A-I      intronic chr16:11798888(-) A-I      intronic chr16:11807990(-) A-I      intronic chr16:11817990(-) A-I      intronic chr16:11817946(-) A-I      intronic chr16:11780041(-) A-I      intronic chr16:11779974(-) A-I      intronic chr16:11779891(-) A-I      intronic chr16:11779850(-) A-I      intronic chr16:11779845(-) A-I      intronic chr16:11779844(-) A-I      intronic chr16:11779293(-) A-I      intronic chr16:11808046(-) A-I      intronic chr16:11807473(-) A-I      intronic chr16:11807465(-) A-I      intronic chr16:11779173(-) A-I      intronic chr16:11774946(-) A-I      intronic chr16:11774920(-) A-I      intronic chr16:11774880(-) A-I      intronic chr16:11774806(-) A-I      intronic chr16:11774805(-) A-I      intronic chr16:11774779(-) A-I      intronic chr16:11797745(-) A-I      intronic chr16:11797935(-) A-I      intronic chr16:11780081(-) A-I      intronic chr16:11780086(-) A-I      intronic chr16:11803205(-) A-I      intronic chr16:11801926(-) A-I      intronic chr16:11801894(-) A-I      intronic chr16:11801858(-) A-I      intronic chr16:11801722(-) A-I      intronic chr16:11801537(-) A-I      intronic chr16:11801499(-) A-I      intronic chr16:11801473(-) A-I      intronic chr16:11801163(-) A-I      intronic chr16:11801066(-) A-I      intronic chr16:11801057(-) A-I      intronic chr16:11801053(-) A-I      intronic chr16:11819853(-) A-I      intronic chr16:11807340(-) A-I      intronic chr16:11807302(-) A-I      intronic chr16:11806919(-) A-I      intronic chr16:11820299(-) A-I      intronic chr16:11820374(-) A-I      intronic chr16:11835684(-) A-I      intronic chr16:11797691(-) A-I      intronic chr16:11835697(-) A-I      intronic chr16:11835717(-) A-I      intronic chr16:11835788(-) A-I      intronic chr16:11835826(-) A-I      intronic chr16:11796520(-) A-I      intronic chr16:11816941(-) A-I      intronic chr16:11816930(-) A-I      intronic chr16:11816924(-) A-I      intronic chr16:11806709(-) A-I      intronic chr16:11815039(-) A-I      intronic chr16:11809282(-) A-I      intronic chr16:11796418(-) A-I      intronic chr16:11796386(-) A-I      intronic chr16:11804485(-) A-I      intronic chr16:11804461(-) A-I      intronic chr16:11803966(-) A-I      intronic chr16:11803494(-) A-I      intronic chr16:11803455(-) A-I      intronic chr16:11803442(-) A-I      intronic chr16:11803429(-) A-I      intronic chr16:11803224(-) A-I      intronic chr16:11808374(-) A-I      intronic chr16:11808072(-) A-I      intronic chr16:11819866(-) A-I      intronic chr16:11819882(-) A-I      intronic chr16:11819893(-) A-I      intronic chr16:11808384(-) A-I      intronic chr16:11819985(-) A-I      intronic chr16:11819847(-) A-I      intronic chr16:11818798(-) A-I      intronic chr16:11818796(-) A-I      intronic chr16:11818782(-) A-I      intronic chr16:11818740(-) A-I      intronic chr16:11818739(-) A-I      intronic chr16:11807449(-) A-I      intronic chr16:11818403(-) A-I      intronic chr16:11803206(-) A-I      intronic chr16:11819986(-) A-I      intronic chr16:11818355(-) A-I      intronic chr16:11818063(-) A-I      intronic chr16:11818039(-) A-I      intronic chr16:11774758(-) A-I      intronic chr16:11774775(-) A-I      intronic chr16:11814319(-) A-I      3'UTR chr16:11815147(-) A-I      3'UTR chr16:11815132(-) A-I      3'UTR chr16:11815103(-) A-I      3'UTR chr16:11814802(-) A-I      3'UTR chr16:11814792(-) A-I      3'UTR chr16:11814791(-) A-I      3'UTR chr16:11814778(-) A-I      3'UTR chr16:11814730(-) A-I      3'UTR chr16:11814669(-) A-I      3'UTR chr16:11814500(-) A-I      3'UTR chr16:11814400(-) A-I      3'UTR chr16:11814344(-) A-I      3'UTR chr16:11814334(-) A-I      3'UTR chr16:11815248(-) A-I      NonSyn:Stp->Trp chr16:11815262(-) A-I      NonSyn:Ser->Gly chr16:11779939(-) A-I      intronic chr16:11801717(-) A-I      intronic chr16:11780013(-) A-I      intronic chr16:11801120(-) A-I      intronic chr16:11788503(-) A-I      intronic chr16:11779848(-) A-I      intronic chr16:11818057(-) A-I      intronic chr16:11801938(-) A-I      intronic chr16:11818377(-) A-I      intronic chr16:11801402(-) A-I      intronic chr16:11818031(-) A-I      intronic chr16:11801883(-) A-I      intronic chr16:11811178(-) A-I      intronic chr16:11789782(-) A-I      intronic chr16:11807338(-) A-I      intronic chr16:11789846(-) A-I      intronic chr16:11796503(-) A-I      intronic chr16:11775021(-) A-I      intronic chr16:11819784(-) A-I      intronic chr16:11777643(-) A-I      intronic chr16:11803246(-) A-I      intronic chr16:11816921(-) A-I      intronic chr16:11808073(-) A-I      intronic chr16:11789671(-) A-I      intronic chr16:11789632(-) A-I      intronic chr16:11819810(-) A-I      intronic chr16:11777808(-) A-I      intronic chr16:11801167(-) A-I      intronic chr16:11811247(-) A-I      intronic chr16:11831157(-) A-I      intronic chr16:11808944(-) A-I      intronic chr16:11808047(-) A-I      intronic chr16:11788582(-) A-I      intronic chr16:11779926(-) A-I      intronic chr16:11815051(-) A-I      intronic chr16:11804657(-) A-I      intronic chr16:11808253(-) A-I      intronic chr16:11818052(-) A-I      intronic chr16:11803887(-) A-I      intronic chr16:11788103(-) A-I      intronic chr16:11779157(-) A-I      intronic chr16:11808396(-) A-I      intronic chr16:11807335(-) A-I      intronic chr16:11777871(-) A-I      intronic chr16:11788581(-) A-I      intronic chr16:11803143(-) A-I      intronic chr16:11815053(-) A-I      intronic chr16:11815033(-) A-I      intronic chr16:11807490(-) A-I      intronic chr16:11777735(-) A-I      intronic chr16:11795130(-) A-I      intronic chr16:11807437(-) A-I      intronic chr16:11820360(-) A-I      intronic chr16:11779104(-) A-I      intronic chr16:11803968(-) A-I      intronic chr16:11788159(-) A-I      intronic chr16:11779338(-) A-I      intronic chr16:11801831(-) A-I      intronic chr16:11801832(-) A-I      intronic chr16:11801586(-) A-I      intronic chr16:11832764(-) A-I      intronic chr16:11822690(-) A-I      intronic chr16:11803247(-) A-I      intronic chr16:11795186(-) A-I      intronic chr16:11808035(-) A-I      intronic chr16:11820863(-) A-I      intronic chr16:11818873(-) A-I      intronic chr16:11819829(-) A-I      intronic chr16:11795164(-) A-I      intronic chr16:11807986(-) A-I      intronic chr16:11801888(-) A-I      intronic chr16:11795166(-) A-I      intronic chr16:11795162(-) A-I      intronic chr16:11795197(-) A-I      intronic chr16:11795131(-) A-I      intronic chr16:11801810(-) A-I      intronic chr16:11814441(-) A-I      3'UTR chr16:11814383(-) A-I      3'UTR chr16:11814683(-) A-I      3'UTR chr16:11815138(-) A-I      3'UTR chr16:11814387(-) A-I      3'UTR chr16:11814436(-) A-I      3'UTR chr16:11814766(-) A-I      3'UTR chr16:11815197(-) A-I      3'UTR chr16:11814767(-) A-I      3'UTR chr16:11818385(-) A-I      intronic chr16:11806654(-) A-I      intronic chr16:11777723(-) A-I      intronic chr16:11819967(-) A-I      intronic chr16:11795163(-) A-I      intronic chr16:11801577(-) A-I      intronic chr16:11801818(-) A-I      intronic chr16:11779037(-) A-I      intronic chr16:11819824(-) A-I      intronic chr16:11807960(-) A-I      intronic chr16:11807440(-) A-I      intronic chr16:11777880(-) A-I      intronic chr16:11819767(-) A-I      intronic chr16:11777719(-) A-I      intronic chr16:11806906(-) A-I      intronic chr16:11789796(-) A-I      intronic chr16:11807509(-) A-I      intronic chr16:11819935(-) A-I      intronic chr16:11808021(-) A-I      intronic chr16:11803917(-) A-I      intronic chr16:11817070(-) A-I      intronic chr16:11798999(-) A-I      intronic chr16:11779103(-) A-I      intronic chr16:11817014(-) A-I      intronic chr16:11779907(-) A-I      intronic chr16:11814871(-) A-I      intronic chr16:11803937(-) A-I      intronic chr16:11806567(-) A-I      intronic chr16:11779341(-) A-I      intronic chr16:11819894(-) A-I      intronic chr16:11780017(-) A-I      intronic chr16:11819902(-) A-I      intronic chr16:11808052(-) A-I      intronic chr16:11774838(-) A-I      intronic chr16:11801401(-) A-I      intronic chr16:11803181(-) A-I      intronic chr16:11803952(-) A-I      intronic chr16:11823940(-) A-I      intronic chr16:11823760(-) A-I      intronic chr16:11815293(-) A-I      intronic chr16:11806552(-) A-I      intronic chr16:11807369(-) A-I      intronic chr16:11774893(-) A-I      intronic chr16:11801747(-) A-I      intronic chr16:11801759(-) A-I      intronic chr16:11816995(-) A-I      intronic chr16:11779953(-) A-I      intronic chr16:11803563(-) A-I      intronic chr16:11807421(-) A-I      intronic chr16:11795090(-) A-I      intronic chr16:11801857(-) A-I      intronic chr16:11779893(-) A-I      intronic chr16:11779002(-) A-I      intronic chr16:11795098(-) A-I      intronic chr16:11777833(-) A-I      intronic chr16:11801153(-) A-I      intronic chr16:11820324(-) A-I      intronic chr16:11801026(-) A-I      intronic chr16:11801681(-) A-I      intronic chr16:11816947(-) A-I      intronic chr16:11808013(-) A-I      intronic chr16:11807475(-) A-I      intronic chr16:11801854(-) A-I      intronic chr16:11779975(-) A-I      intronic chr16:11788104(-) A-I      intronic chr16:11818773(-) A-I      intronic chr16:11797909(-) A-I      intronic chr16:11779023(-) A-I      intronic chr16:11807339(-) A-I      intronic chr16:11796352(-) A-I      intronic chr16:11777801(-) A-I      intronic chr16:11807419(-) A-I      intronic chr16:11818766(-) A-I      intronic chr16:11789844(-) A-I      intronic chr16:11779131(-) A-I      intronic chr16:11819769(-) A-I      intronic chr16:11801442(-) A-I      intronic chr16:11806846(-) A-I      intronic chr16:11780087(-) A-I      intronic chr16:11808152(-) A-I      intronic chr16:11801472(-) A-I      intronic chr16:11807300(-) A-I      intronic chr16:11820660(-) A-I      intronic chr16:11795272(-) A-I      intronic chr16:11801578(-) A-I      intronic chr16:11774945(-) A-I      intronic chr16:11795107(-) A-I      intronic chr16:11774933(-) A-I      intronic chr16:11774850(-) A-I      intronic chr16:11820249(-) A-I      intronic chr16:11804488(-) A-I      intronic chr16:11774904(-) A-I      intronic chr16:11796426(-) A-I      intronic chr16:11779979(-) A-I      intronic chr16:11819898(-) A-I      intronic chr16:11807349(-) A-I      intronic chr16:11808252(-) A-I      intronic chr16:11803241(-) A-I      intronic chr16:11801679(-) A-I      intronic chr16:11817973(-) A-I      intronic chr16:11826964(-) A-I      intronic chr16:11816992(-) A-I      intronic chr16:11815052(-) A-I      intronic chr16:11820700(-) A-I      intronic chr16:11819789(-) A-I      intronic chr16:11801686(-) A-I      intronic chr16:11777879(-) A-I      intronic chr16:11801773(-) A-I      intronic chr16:11820354(-) A-I      intronic chr16:11817991(-) A-I      intronic chr16:11804640(-) A-I      intronic chr16:11815269(-) A-I      Syn:Pro->Pro chr16:11818423(-) A-I      intronic chr16:11788173(-) A-I      intronic chr16:11803842(-) A-I      intronic chr16:11801828(-) A-I      intronic chr16:11803877(-) A-I      intronic chr16:11795157(-) A-I      intronic chr16:11797826(-) A-I      intronic chr16:11797703(-) A-I      intronic chr16:11803156(-) A-I      intronic chr16:11795266(-) A-I      intronic chr16:11775014(-) A-I      intronic chr16:11807551(-) A-I      intronic chr16:11815037(-) A-I      intronic chr16:11777744(-) A-I      intronic chr16:11806836(-) A-I      intronic chr16:11777704(-) A-I      intronic chr16:11801824(-) A-I      intronic chr16:11788189(-) A-I      intronic chr16:11774916(-) A-I      intronic chr16:11807123(-) A-I      intronic chr16:11803864(-) A-I      intronic chr16:11807499(-) A-I      intronic chr16:11807522(-) A-I      intronic chr16:11796273(-) A-I      intronic chr16:11816974(-) A-I      intronic chr16:11777684(-) A-I      intronic chr16:11807315(-) A-I      intronic chr16:11801165(-) A-I      intronic chr16:11796369(-) A-I      intronic chr16:11789856(-) A-I      intronic chr16:11777853(-) A-I      intronic chr16:11778963(-) A-I      intronic chr16:11795121(-) A-I      intronic chr16:11796358(-) A-I      intronic chr16:11807411(-) A-I      intronic chr16:11820353(-) A-I      intronic chr16:11779112(-) A-I      intronic chr16:11774859(-) A-I      intronic chr16:11807926(-) A-I      intronic chr16:11804010(-) A-I      intronic chr16:11803850(-) A-I      intronic chr16:11803211(-) A-I      intronic chr16:11774919(-) A-I      intronic chr16:11801437(-) A-I      intronic chr16:11817440(-) A-I      intronic chr16:11822757(-) A-I      intronic chr16:11799033(-) A-I      intronic chr16:11809026(-) A-I      intronic chr16:11807131(-) A-I      intronic chr16:11789644(-) A-I      intronic chr16:11801907(-) A-I      intronic chr16:11816949(-) A-I      intronic chr16:11788094(-) A-I      intronic chr16:11814887(-) A-I      intronic chr16:11801721(-) A-I      intronic chr16:11779312(-) A-I      intronic chr16:11820024(-) A-I      intronic chr16:11774819(-) A-I      intronic chr16:11778287(-) A-I      intronic chr16:11818056(-) A-I      intronic chr16:11818454(-) A-I      intronic chr16:11814908(-) A-I      intronic chr16:11814909(-) A-I      intronic chr16:11774981(-) A-I      intronic chr16:11807061(-) A-I      intronic chr16:11807451(-) A-I      intronic chr16:11775026(-) A-I      intronic chr16:11801117(-) A-I      intronic chr16:11814912(-) A-I      intronic chr16:11801372(-) A-I      intronic chr16:11775367(-) A-I      intronic chr16:11777745(-) A-I      intronic chr16:11818027(-) A-I      intronic chr16:11801197(-) A-I      intronic chr16:11774906(-) A-I      intronic chr16:11807410(-) A-I      intronic chr16:11795265(-) A-I      intronic chr16:11814474(-) A-I      3'UTR chr16:11814799(-) A-I      3'UTR chr16:11814865(-) A-I      3'UTR chr16:11815185(-) A-I      3'UTR chr16:11814446(-) A-I      3'UTR chr16:11814816(-) A-I      3'UTR chr16:11814377(-) A-I      3'UTR chr16:11814339(-) A-I      3'UTR chr16:11814449(-) A-I      3'UTR chr16:11814726(-) A-I      3'UTR chr16:11814811(-) A-I      3'UTR chr16:11814780(-) A-I      3'UTR chr16:11814773(-) A-I      3'UTR chr16:11815215(-) A-I      3'UTR chr16:11815214(-) A-I      3'UTR chr16:11815129(-) A-I      3'UTR chr16:11814793(-) A-I      3'UTR chr16:11814777(-) A-I      3'UTR chr16:11814443(-) A-I      3'UTR chr16:11814687(-) A-I      3'UTR chr16:11814771(-) A-I      3'UTR chr16:11815175(-) A-I      3'UTR chr16:11814765(-) A-I      3'UTR chr16:11814451(-) A-I      3'UTR chr16:11814671(-) A-I      3'UTR chr16:11814448(-) A-I      3'UTR chr16:11814794(-) A-I      3'UTR chr16:11814762(-) A-I      3'UTR chr16:11814690(-) A-I      3'UTR chr16:11814410(-) A-I      3'UTR chr16:11814670(-) A-I      3'UTR chr16:11814564(-) A-I      3'UTR chr16:11815090(-) A-I      3'UTR chr16:11815238(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TXNDC11	chr16:11814339(-) A-I intron -    15342557 chr16:11814387(-) A-I intron -    15342557 chr16:11814446(-) A-I intron -    15342557   //15258596 chr16:11814448(-) A-I intron -    15342557   //15258596 chr16:11814449(-) A-I intron -    15342557   //15258596 chr16:11814564(-) A-I intron -    15342557   //15258596   //22327324 chr16:11815269(-) A-I intron -    15342557 chr16:11774904(-) A-I intron -    22327324 chr16:11777833(-) A-I intron -    22327324 chr16:11801681(-) A-I intron -    22327324 chr16:11801686(-) A-I intron -    22327324 chr16:11807410(-) A-I intron -    22327324 chr16:11814670(-) A-I intron -    22327324 chr16:11814671(-) A-I intron -    22327324 chr16:11814871(-) A-I intron -    22327324 chr16:11819898(-) A-I intron -    22327324 chr16:11795130(-) A-I intron -    22028664 chr16:11795131(-) A-I intron -    22028664 chr16:11795162(-) A-I intron -    22028664 chr16:11795163(-) A-I intron -    22028664 chr16:11795164(-) A-I intron -    22028664 chr16:11795166(-) A-I intron -    22028664 chr16:11795186(-) A-I intron -    22028664 chr16:11795197(-) A-I intron -    22028664 chr16:11795265(-) A-I intron -    22028664 chr16:11795272(-) A-I intron -    22028664 chr16:11806846(-) A-I intron -    21960545 chr16:11807499(-) A-I intron -    21960545 chr16:11815293(-) A-I intron -    21960545 chr16:11773111(-) A-C exon CDS    21725310 chr16:11774838(-) A-G intron -    22484847 chr16:11774859(-) A-G intron -    22484847 chr16:11774904(-) A-G intron -    22484847 chr16:11774906(-) A-G intron -    22484847 chr16:11774945(-) A-G intron -    22484847 chr16:11777808(-) A-G intron -    22484847 chr16:11777833(-) A-G intron -    22484847 chr16:11779104(-) A-G intron -    22484847 chr16:11798999(-) A-G intron -    22484847 chr16:11799033(-) A-G intron -    22484847 chr16:11801026(-) A-G intron -    22484847 chr16:11801437(-) A-G intron -    22484847 chr16:11801442(-) A-G intron -    22484847 chr16:11801681(-) A-G intron -    22484847 chr16:11801686(-) A-G intron -    22484847 chr16:11801721(-) A-G intron -    22484847 chr16:11801747(-) A-G intron -    22484847 chr16:11801810(-) A-G intron -    22484847 chr16:11801818(-) A-G intron -    22484847 chr16:11801888(-) A-G intron -    22484847 chr16:11803246(-) A-G intron -    22484847 chr16:11803247(-) A-G intron -    22484847 chr16:11803887(-) A-G intron -    22484847 chr16:11803968(-) A-G intron -    22484847 chr16:11804010(-) A-G intron -    22484847 chr16:11806552(-) A-G intron -    22484847 chr16:11807315(-) A-G intron -    22484847 chr16:11807410(-) A-G intron -    22484847 chr16:11807411(-) A-G intron -    22484847 chr16:11807421(-) A-G intron -    22484847 chr16:11807490(-) A-G intron -    22484847 chr16:11807986(-) A-G intron -    22484847 chr16:11808252(-) A-G intron -    22484847 chr16:11814446(-) A-G intron -    22484847 chr16:11814564(-) A-G intron -    22484847 chr16:11814670(-) A-G intron -    22484847 chr16:11814671(-) A-G intron -    22484847 chr16:11814771(-) A-G intron -    22484847 chr16:11814780(-) A-G intron -    22484847 chr16:11814871(-) A-G intron -    22484847 chr16:11814887(-) A-G intron -    22484847 chr16:11818056(-) A-G intron -    22484847 chr16:11819898(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TXNDC11	chr16:11773058-11773059(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr16:11773063-11773064(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr16:11773215-11773216(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr16:11773255-11773256(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr16:11773270-11773271(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr16:11773328-11773329(-) m6A CDS//exon       24284625//24981863//27773535//27371828//27773536 chr16:11773349-11773350(-) Y CDS//exon       26075521 chr16:11773500-11773501(-) m6A CDS//exon       24284625//24981863//28052920//26404942//27773535//27371828 chr16:11773612-11773613(-) m6A CDS//exon       24981863//27773535 chr16:11773642-11773643(-) m6A CDS//exon       27773535 chr16:11773687-11773688(-) m6A CDS//exon       27773535 chr16:11781730-11781731(-) m6A CDS//exon       27773535 chr16:11781742-11781743(-) m6A CDS//exon       27773535 chr16:11782161-11782162(-) m6A CDS//exon       27773535 chr16:11785257-11785258(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:11785310-11785311(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:11785319-11785320(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:11785342-11785343(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:11785357-11785358(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:11785381-11785382(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:11785476-11785477(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085 chr16:11785514-11785515(-) m6A CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085 chr16:11785582-11785583(-) m6A CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085 chr16:11785604-11785605(-) m6A CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:11785700-11785701(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:11785716-11785717(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr16:11785733-11785734(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr16:11785804-11785805(-) m6A CDS//exon       24284625//24981863//27371828//22575960 chr16:11785897-11785898(-) m6A 3'UTR//CDS//exon       - chr16:11792043-11792044(-) m6A 3'UTR//CDS//exon       - chr16:11824507-11824508(-) m6A CDS//intron       27773535 chr16:11824557-11824558(-) m6A CDS//intron       27773535 chr16:11836494-11836495(-) m6A CDS//exon       24209618//27371828//27773536 chr16:11836728-11836729(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TXNDC11	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-1-5p
Interactor2: TXNDC11

Evidence Support:

Strong-Evidence	RISC-IP
Support Database	ViRBase

References:

PMID	20585629	Target region	5'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	HEK293 cells	Interactor2 expression	None
Description	Here, we identify cellular transcript targets of one of the most highly expressed HCMV encoded miRNAs, miR-US25-1, using a recently developed biochemical approach called RISC immunoprecipitation. Strikingly, the majority of identified transcripts contained miR-US25-1 target sites within the 5'UTR rather than the 3'UTR.