Basic Information:

  VIRBase ID:  

VHID00507965

  Virus:  

Human herpesvirus 5 strain AD169

  Host:  

Homo sapiens

  Confidence Score:  

0.7311

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-1-5p:  MIMAT0001581          NUP153:  NM_001278210     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-1-5p	NUP153
miRBase Accession/Entrez ID	MIMAT0001581	9972
Organism	Human herpesvirus 5 strain AD169	Homo sapiens
Category	miRNA	mRNA
Alias	-	HNUP153//N153

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NUP153	chr6:17640921(-) A-I      intronic chr6:17636560(-) A-I      intronic chr6:17636458(-) A-I      intronic chr6:17636454(-) A-I      intronic chr6:17636444(-) A-I      intronic chr6:17636417(-) A-I      intronic chr6:17636408(-) A-I      intronic chr6:17636393(-) A-I      intronic chr6:17635840(-) A-I      intronic chr6:17635828(-) A-I      intronic chr6:17635827(-) A-I      intronic chr6:17635806(-) A-I      intronic chr6:17635765(-) A-I      intronic chr6:17634779(-) A-I      intronic chr6:17623355(-) A-I      intronic chr6:17623352(-) A-I      intronic chr6:17623347(-) A-I      intronic chr6:17623233(-) A-I      intronic chr6:17623205(-) A-I      intronic chr6:17623180(-) A-I      intronic chr6:17622682(-) A-I      intronic chr6:17622498(-) A-I      intronic chr6:17622446(-) A-I      intronic chr6:17622422(-) A-I      intronic chr6:17689949(-) A-I      intronic chr6:17689950(-) A-I      intronic chr6:17643537(-) A-I      intronic chr6:17643459(-) A-I      intronic chr6:17641850(-) A-I      intronic chr6:17641130(-) A-I      intronic chr6:17641127(-) A-I      intronic chr6:17641016(-) A-I      intronic chr6:17641008(-) A-I      intronic chr6:17641006(-) A-I      intronic chr6:17643640(-) A-I      intronic chr6:17651439(-) A-I      intronic chr6:17653440(-) A-I      intronic chr6:17653443(-) A-I      intronic chr6:17655967(-) A-I      intronic chr6:17666152(-) A-I      intronic chr6:17620243(-) A-I      intronic chr6:17620242(-) A-I      intronic chr6:17666133(-) A-I      intronic chr6:17619048(-) A-I      intronic chr6:17619002(-) A-I      intronic chr6:17618961(-) A-I      intronic chr6:17618929(-) A-I      intronic chr6:17618849(-) A-I      intronic chr6:17617976(-) A-I      intronic chr6:17617908(-) A-I      intronic chr6:17617871(-) A-I      intronic chr6:17617187(-) A-I      intronic chr6:17617159(-) A-I      intronic chr6:17617152(-) A-I      intronic chr6:17617147(-) A-I      intronic chr6:17617083(-) A-I      intronic chr6:17617078(-) A-I      intronic chr6:17617066(-) A-I      intronic chr6:17617053(-) A-I      intronic chr6:17617048(-) A-I      intronic chr6:17666127(-) A-I      intronic chr6:17661441(-) A-I      intronic chr6:17652255(-) A-I      intronic chr6:17652259(-) A-I      intronic chr6:17652267(-) A-I      intronic chr6:17654685(-) A-I      intronic chr6:17654720(-) A-I      intronic chr6:17654754(-) A-I      intronic chr6:17655796(-) A-I      intronic chr6:17655852(-) A-I      intronic chr6:17655853(-) A-I      intronic chr6:17655855(-) A-I      intronic chr6:17655879(-) A-I      intronic chr6:17655903(-) A-I      intronic chr6:17656232(-) A-I      intronic chr6:17656244(-) A-I      intronic chr6:17656268(-) A-I      intronic chr6:17656273(-) A-I      intronic chr6:17656336(-) A-I      intronic chr6:17656359(-) A-I      intronic chr6:17656390(-) A-I      intronic chr6:17656738(-) A-I      intronic chr6:17657676(-) A-I      intronic chr6:17657683(-) A-I      intronic chr6:17657726(-) A-I      intronic chr6:17658413(-) A-I      intronic chr6:17658445(-) A-I      intronic chr6:17658490(-) A-I      intronic chr6:17658515(-) A-I      intronic chr6:17658565(-) A-I      intronic chr6:17658570(-) A-I      intronic chr6:17661433(-) A-I      intronic chr6:17661410(-) A-I      intronic chr6:17657708(-) A-I      intronic chr6:17656292(-) A-I      intronic chr6:17655790(-) A-I      intronic chr6:17655757(-) A-I      intronic chr6:17651508(-) A-I      intronic chr6:17651488(-) A-I      intronic chr6:17651484(-) A-I      intronic chr6:17651452(-) A-I      intronic chr6:17651447(-) A-I      intronic chr6:17651422(-) A-I      intronic chr6:17645633(-) A-I      intronic chr6:17636339(-) A-I      intronic chr6:17636320(-) A-I      intronic chr6:17658436(-) A-I      intronic chr6:17658514(-) A-I      intronic chr6:17658619(-) A-I      intronic chr6:17658623(-) A-I      intronic chr6:17671269(-) A-I      intronic chr6:17659850(-) A-I      intronic chr6:17692181(-) A-I      intronic chr6:17659715(-) A-I      intronic chr6:17694812(-) A-I      intronic chr6:17694831(-) A-I      intronic chr6:17694866(-) A-I      intronic chr6:17699864(-) A-I      intronic chr6:17617153(-) A-I      intronic chr6:17666616(-) A-I      intronic chr6:17645807(-) A-I      intronic chr6:17647260(-) A-I      intronic chr6:17647108(-) A-I      intronic chr6:17647095(-) A-I      intronic chr6:17647056(-) A-I      intronic chr6:17645806(-) A-I      intronic chr6:17645205(-) A-I      intronic chr6:17645179(-) A-I      intronic chr6:17644929(-) A-I      intronic chr6:17643651(-) A-I      intronic chr6:17643591(-) A-I      intronic chr6:17659734(-) A-I      intronic chr6:17659880(-) A-I      intronic chr6:17659881(-) A-I      intronic chr6:17659897(-) A-I      intronic chr6:17659952(-) A-I      intronic chr6:17659953(-) A-I      intronic chr6:17659969(-) A-I      intronic chr6:17659974(-) A-I      intronic chr6:17659975(-) A-I      intronic chr6:17661405(-) A-I      intronic chr6:17661482(-) A-I      intronic chr6:17665092(-) A-I      intronic chr6:17665135(-) A-I      intronic chr6:17665245(-) A-I      intronic chr6:17666530(-) A-I      intronic chr6:17666531(-) A-I      intronic chr6:17666624(-) A-I      intronic chr6:17668403(-) A-I      intronic chr6:17668444(-) A-I      intronic chr6:17668506(-) A-I      intronic chr6:17668528(-) A-I      intronic chr6:17668894(-) A-I      intronic chr6:17668961(-) A-I      intronic chr6:17620253(-) A-I      intronic chr6:17671292(-) A-I      intronic chr6:17674977(-) A-I      intronic chr6:17682204(-) A-I      intronic chr6:17686296(-) A-I      intronic chr6:17686335(-) A-I      intronic chr6:17686723(-) A-I      intronic chr6:17686727(-) A-I      intronic chr6:17686738(-) A-I      intronic chr6:17686787(-) A-I      intronic chr6:17686803(-) A-I      intronic chr6:17686804(-) A-I      intronic chr6:17686807(-) A-I      intronic chr6:17686893(-) A-I      intronic chr6:17689896(-) A-I      intronic chr6:17689935(-) A-I      intronic chr6:17656287(-) A-I      intronic chr6:17668422(-) A-I      intronic chr6:17622424(-) A-I      intronic chr6:17636544(-) A-I      intronic chr6:17618935(-) A-I      intronic chr6:17643575(-) A-I      intronic chr6:17661543(-) A-I      intronic chr6:17661445(-) A-I      intronic chr6:17659806(-) A-I      intronic chr6:17668952(-) A-I      intronic chr6:17672127(-) A-I      intronic chr6:17636558(-) A-I      intronic chr6:17622509(-) A-I      intronic chr6:17645104(-) A-I      intronic chr6:17668908(-) A-I      intronic chr6:17668998(-) A-I      intronic chr6:17671235(-) A-I      intronic chr6:17659832(-) A-I      intronic chr6:17658540(-) A-I      intronic chr6:17692693(-) A-I      intronic chr6:17658374(-) A-I      intronic chr6:17636552(-) A-I      intronic chr6:17674918(-) A-I      intronic chr6:17669412(-) A-I      intronic chr6:17654780(-) A-I      intronic chr6:17657608(-) A-I      intronic chr6:17651282(-) A-I      intronic chr6:17656354(-) A-I      intronic chr6:17645639(-) A-I      intronic chr6:17641986(-) A-I      intronic chr6:17656350(-) A-I      intronic chr6:17667747(-) A-I      intronic chr6:17651413(-) A-I      intronic chr6:17657695(-) A-I      intronic chr6:17654771(-) A-I      intronic chr6:17622588(-) A-I      intronic chr6:17668957(-) A-I      intronic chr6:17697039(-) A-I      intronic chr6:17658470(-) A-I      intronic chr6:17653362(-) A-I      intronic chr6:17645603(-) A-I      intronic chr6:17665221(-) A-I      intronic chr6:17618969(-) A-I      intronic chr6:17655965(-) A-I      intronic chr6:17655862(-) A-I      intronic chr6:17640916(-) A-I      intronic chr6:17657516(-) A-I      intronic chr6:17618977(-) A-I      intronic chr6:17689905(-) A-I      intronic chr6:17661289(-) A-I      intronic chr6:17654664(-) A-I      intronic chr6:17617823(-) A-I      intronic chr6:17656311(-) A-I      intronic chr6:17659855(-) A-I      intronic chr6:17663718(-) A-I      intronic chr6:17671993(-) A-I      intronic chr6:17617127(-) A-I      intronic chr6:17666330(-) A-I      intronic chr6:17663632(-) A-I      intronic chr6:17653165(-) A-I      intronic chr6:17636457(-) A-I      intronic chr6:17617123(-) A-I      intronic chr6:17655867(-) A-I      intronic chr6:17655793(-) A-I      intronic chr6:17678037(-) A-I      intronic chr6:17635923(-) A-I      intronic chr6:17622430(-) A-I      intronic chr6:17654701(-) A-I      intronic chr6:17618042(-) A-I      intronic chr6:17705063(-) A-I      intronic chr6:17655822(-) A-I      intronic chr6:17667759(-) A-I      intronic chr6:17647111(-) A-I      intronic chr6:17661365(-) A-I      intronic chr6:17655941(-) A-I      intronic chr6:17635505(-) A-I      intronic chr6:17659812(-) A-I      intronic chr6:17694065(-) A-I      intronic chr6:17618026(-) A-I      intronic chr6:17692669(-) A-I      intronic chr6:17647084(-) A-I      intronic chr6:17617151(-) A-I      intronic chr6:17656270(-) A-I      intronic chr6:17668965(-) A-I      intronic chr6:17635810(-) A-I      intronic chr6:17654629(-) A-I      intronic chr6:17645663(-) A-I      intronic chr6:17619000(-) A-I      intronic chr6:17668530(-) A-I      intronic chr6:17617902(-) A-I      intronic chr6:17701943(-) A-I      intronic chr6:17657779(-) A-I      intronic chr6:17654732(-) A-I      intronic chr6:17654823(-) A-I      intronic chr6:17668584(-) A-I      intronic chr6:17618070(-) A-I      intronic chr6:17658456(-) A-I      intronic chr6:17653138(-) A-I      intronic chr6:17705155(-) A-I      intronic chr6:17635479(-) A-I      intronic chr6:17617954(-) A-I      intronic chr6:17651407(-) A-I      intronic chr6:17658527(-) A-I      intronic chr6:17635749(-) A-I      intronic chr6:17661302(-) A-I      intronic chr6:17622636(-) A-I      intronic chr6:17668962(-) A-I      intronic chr6:17666083(-) A-I      intronic chr6:17641058(-) A-I      intronic chr6:17661488(-) A-I      intronic chr6:17658505(-) A-I      intronic chr6:17656314(-) A-I      intronic chr6:17689587(-) A-I      intronic chr6:17653375(-) A-I      intronic chr6:17645729(-) A-I      intronic chr6:17617964(-) A-I      intronic chr6:17668857(-) A-I      intronic chr6:17653272(-) A-I      intronic chr6:17617848(-) A-I      intronic chr6:17661341(-) A-I      intronic chr6:17640976(-) A-I      intronic chr6:17623172(-) A-I      intronic chr6:17635925(-) A-I      intronic chr6:17655888(-) A-I      intronic chr6:17640964(-) A-I      intronic chr6:17657713(-) A-I      intronic chr6:17672131(-) A-I      intronic chr6:17663659(-) A-I      intronic chr6:17666662(-) A-I      intronic chr6:17656826(-) A-I      intronic chr6:17634771(-) A-I      intronic chr6:17659800(-) A-I      intronic chr6:17666080(-) A-I      intronic chr6:17658448(-) A-I      intronic chr6:17641052(-) A-I      intronic chr6:17666084(-) A-I      intronic chr6:17657787(-) A-I      intronic chr6:17641513(-) A-I      intronic chr6:17661436(-) A-I      intronic chr6:17636308(-) A-I      intronic chr6:17658480(-) A-I      intronic chr6:17623278(-) A-I      intronic chr6:17656256(-) A-I      intronic chr6:17686303(-) A-I      intronic chr6:17661459(-) A-I      intronic chr6:17654731(-) A-I      intronic chr6:17686898(-) A-I      intronic chr6:17689860(-) A-I      intronic chr6:17635695(-) A-I      intronic chr6:17696051(-) A-I      intronic chr6:17661379(-) A-I      intronic chr6:17666580(-) A-I      intronic chr6:17617119(-) A-I      intronic chr6:17663565(-) A-I      intronic chr6:17620146(-) A-I      intronic chr6:17645217(-) A-I      intronic chr6:17656766(-) A-I      intronic chr6:17668383(-) A-I      intronic chr6:17657673(-) A-I      intronic chr6:17655922(-) A-I      intronic chr6:17622596(-) A-I      intronic chr6:17661544(-) A-I      intronic chr6:17645195(-) A-I      intronic chr6:17636422(-) A-I      intronic chr6:17668592(-) A-I      intronic chr6:17634806(-) A-I      intronic chr6:17689572(-) A-I      intronic chr6:17635619(-) A-I      intronic chr6:17643499(-) A-I      intronic chr6:17647187(-) A-I      intronic chr6:17656286(-) A-I      intronic chr6:17618869(-) A-I      intronic chr6:17617049(-) A-I      intronic chr6:17620207(-) A-I      intronic chr6:17668505(-) A-I      intronic chr6:17634963(-) A-I      intronic chr6:17659883(-) A-I      intronic chr6:17636421(-) A-I      intronic chr6:17655858(-) A-I      intronic chr6:17645556(-) A-I      intronic chr6:17671179(-) A-I      intronic chr6:17672237(-) A-I      intronic chr6:17655878(-) A-I      intronic chr6:17654621(-) A-I      intronic chr6:17641139(-) A-I      intronic chr6:17622493(-) A-I      intronic chr6:17654746(-) A-I      intronic chr6:17656279(-) A-I      intronic chr6:17666663(-) A-I      intronic chr6:17657556(-) A-I      intronic chr6:17645579(-) A-I      intronic chr6:17657528(-) A-I      intronic chr6:17651338(-) A-I      intronic chr6:17659772(-) A-I      intronic chr6:17622513(-) A-I      intronic chr6:17659836(-) A-I      intronic chr6:17636466(-) A-I      intronic chr6:17657712(-) A-I      intronic chr6:17641012(-) A-I      intronic chr6:17640908(-) A-I      intronic chr6:17659809(-) A-I      intronic chr6:17654717(-) A-I      intronic chr6:17699571(-) A-I      intronic chr6:17655805(-) A-I      intronic chr6:17655781(-) A-I      intronic chr6:17663571(-) A-I      intronic chr6:17659801(-) A-I      intronic chr6:17656821(-) A-I      intronic chr6:17618030(-) A-I      intronic chr6:17617154(-) A-I      intronic chr6:17689900(-) A-I      intronic chr6:17658545(-) A-I      intronic chr6:17636520(-) A-I      intronic chr6:17634850(-) A-I      intronic chr6:17645617(-) A-I      intronic chr6:17617252(-) A-I      intronic chr6:17622668(-) A-I      intronic chr6:17668548(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NUP153	chr6:17636479(-) A-I intron -    22327324 chr6:17645617(-) A-I intron -    22327324 chr6:17658037(-) A-I intron -    21960545 chr6:17658623(-) A-I intron -    21960545 chr6:17617049(-) A-G intron -    22484847 chr6:17617073(-) A-G intron -    22484847 chr6:17617119(-) A-G intron -    22484847 chr6:17617151(-) A-G intron -    22484847 chr6:17617154(-) A-G intron -    22484847 chr6:17617157(-) A-G intron -    22484847 chr6:17617252(-) A-G intron -    22484847 chr6:17617891(-) A-G intron -    22484847 chr6:17617902(-) A-G intron -    22484847 chr6:17617954(-) A-G intron -    22484847 chr6:17618935(-) A-G intron -    22484847 chr6:17619069(-) A-G intron -    22484847 chr6:17620146(-) A-G intron -    22484847 chr6:17620207(-) A-G intron -    22484847 chr6:17622430(-) A-G intron -    22484847 chr6:17622493(-) A-G intron -    22484847 chr6:17622636(-) A-G intron -    22484847 chr6:17623172(-) A-G intron -    22484847 chr6:17623274(-) A-G intron -    22484847 chr6:17623278(-) A-G intron -    22484847 chr6:17635479(-) A-G intron -    22484847 chr6:17635505(-) A-G intron -    22484847 chr6:17635619(-) A-G intron -    22484847 chr6:17635695(-) A-G intron -    22484847 chr6:17635757(-) A-G intron -    22484847 chr6:17635923(-) A-G intron -    22484847 chr6:17635925(-) A-G intron -    22484847 chr6:17636382(-) A-G intron -    22484847 chr6:17636402(-) A-G intron -    22484847 chr6:17636418(-) A-G intron -    22484847 chr6:17636421(-) A-G intron -    22484847 chr6:17636422(-) A-G intron -    22484847 chr6:17636457(-) A-G intron -    22484847 chr6:17636466(-) A-G intron -    22484847 chr6:17636479(-) A-G intron -    22484847 chr6:17636519(-) A-G intron -    22484847 chr6:17636520(-) A-G intron -    22484847 chr6:17636552(-) A-G intron -    22484847 chr6:17636558(-) A-G intron -    22484847 chr6:17640946(-) A-G intron -    22484847 chr6:17645195(-) A-G intron -    22484847 chr6:17645217(-) A-G intron -    22484847 chr6:17645280(-) A-G intron -    22484847 chr6:17645603(-) A-G intron -    22484847 chr6:17645617(-) A-G intron -    22484847 chr6:17645805(-) A-G intron -    22484847 chr6:17647072(-) T-C intron -    22484847 chr6:17647084(-) A-G intron -    22484847 chr6:17647111(-) A-G intron -    22484847 chr6:17651413(-) A-G intron -    22484847 chr6:17651474(-) A-G intron -    22484847 chr6:17654681(-) A-G intron -    22484847 chr6:17654707(-) A-G intron -    22484847 chr6:17654717(-) A-G intron -    22484847 chr6:17654730(-) A-G intron -    22484847 chr6:17654746(-) A-G intron -    22484847 chr6:17654776(-) A-G intron -    22484847 chr6:17654823(-) A-G intron -    22484847 chr6:17654824(-) A-G intron -    22484847 chr6:17655705(-) C-T intron -    22484847 chr6:17655781(-) A-G intron -    22484847 chr6:17655782(-) A-G intron -    22484847 chr6:17655813(-) A-G intron -    22484847 chr6:17655822(-) A-G intron -    22484847 chr6:17655823(-) A-G intron -    22484847 chr6:17655858(-) A-G intron -    22484847 chr6:17655862(-) A-G intron -    22484847 chr6:17655864(-) A-G intron -    22484847 chr6:17655888(-) A-G intron -    22484847 chr6:17655898(-) A-G intron -    22484847 chr6:17655927(-) A-G intron -    22484847 chr6:17655965(-) A-G intron -    22484847 chr6:17656279(-) A-G intron -    22484847 chr6:17656286(-) A-G intron -    22484847 chr6:17656311(-) A-G intron -    22484847 chr6:17656314(-) A-G intron -    22484847 chr6:17656324(-) A-G intron -    22484847 chr6:17656344(-) C-G intron -    22484847 chr6:17656350(-) A-G intron -    22484847 chr6:17656354(-) A-G intron -    22484847 chr6:17656744(-) G-A intron -    22484847 chr6:17656766(-) A-G intron -    22484847 chr6:17657522(-) G-T intron -    22484847 chr6:17657528(-) A-G intron -    22484847 chr6:17657569(-) A-G intron -    22484847 chr6:17657687(-) A-G intron -    22484847 chr6:17657695(-) A-G intron -    22484847 chr6:17657712(-) A-G intron -    22484847 chr6:17657713(-) A-G intron -    22484847 chr6:17657787(-) A-G intron -    22484847 chr6:17658396(-) A-G intron -    22484847 chr6:17658456(-) A-G intron -    22484847 chr6:17658470(-) A-G intron -    22484847 chr6:17658503(-) A-G intron -    22484847 chr6:17658527(-) A-G intron -    22484847 chr6:17658540(-) A-G intron -    22484847 chr6:17658544(-) A-G intron -    22484847 chr6:17658545(-) A-G intron -    22484847 chr6:17658586(-) A-G intron -    22484847 chr6:17659764(-) A-G intron -    22484847 chr6:17659771(-) A-G intron -    22484847 chr6:17659801(-) A-G intron -    22484847 chr6:17659806(-) A-G intron -    22484847 chr6:17659812(-) A-G intron -    22484847 chr6:17659828(-) G-A intron -    22484847 chr6:17659842(-) A-G intron -    22484847 chr6:17659855(-) A-G intron -    22484847 chr6:17659877(-) A-G intron -    22484847 chr6:17661379(-) A-G intron -    22484847 chr6:17661399(-) A-C intron -    22484847 chr6:17661445(-) A-G intron -    22484847 chr6:17661462(-) A-G intron -    22484847 chr6:17661488(-) A-G intron -    22484847 chr6:17661543(-) A-G intron -    22484847 chr6:17661544(-) A-G intron -    22484847 chr6:17666083(-) A-G intron -    22484847 chr6:17666084(-) A-G intron -    22484847 chr6:17666475(-) A-G intron -    22484847 chr6:17666522(-) A-G intron -    22484847 chr6:17666580(-) A-G intron -    22484847 chr6:17666662(-) A-G intron -    22484847 chr6:17666663(-) A-G intron -    22484847 chr6:17667747(-) A-G intron -    22484847 chr6:17667759(-) A-G intron -    22484847 chr6:17667781(-) A-G intron -    22484847 chr6:17668422(-) A-G intron -    22484847 chr6:17668451(-) A-G intron -    22484847 chr6:17668504(-) A-G intron -    22484847 chr6:17668548(-) A-G intron -    22484847 chr6:17668583(-) A-G intron -    22484847 chr6:17668816(-) A-G intron -    22484847 chr6:17668857(-) A-G intron -    22484847 chr6:17668962(-) A-G intron -    22484847 chr6:17668998(-) A-G intron -    22484847 chr6:17669412(-) A-G intron -    22484847 chr6:17671179(-) A-G intron -    22484847 chr6:17671235(-) A-G intron -    22484847 chr6:17672237(-) A-G intron -    22484847 chr6:17673410(-) A-G intron -    22484847 chr6:17674918(-) A-G intron -    22484847 chr6:17686303(-) A-G intron -    22484847 chr6:17686370(-) A-G intron -    22484847 chr6:17686724(-) A-G intron -    22484847 chr6:17686898(-) A-G intron -    22484847 chr6:17689572(-) A-G intron -    22484847 chr6:17689587(-) A-G intron -    22484847 chr6:17689860(-) A-G intron -    22484847 chr6:17689900(-) A-G intron -    22484847 chr6:17690394(-) A-G intron -    22484847 chr6:17691391(-) C-T intron -    22484847 chr6:17692170(-) A-G intron -    22484847 chr6:17692693(-) A-G intron -    22484847 chr6:17692701(-) A-G intron -    22484847 chr6:17696051(-) A-G intron -    22484847 chr6:17702839(-) T-C intron -    22484847 chr6:17705165(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NUP153	chr6:17616011-17616012(-) m6A 3'UTR       24284625//27773535//22608085 chr6:17616127-17616128(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//22608085 chr6:17616220-17616221(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22575960//22608085 chr6:17616350-17616351(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr6:17616377-17616378(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr6:17616877-17616878(-) m6A CDS       24284625 chr6:17624981-17624982(-) m6A CDS       27773535 chr6:17624995-17624996(-) m6A CDS       27773535 chr6:17625038-17625039(-) m6A CDS       27773535 chr6:17625043-17625044(-) m6A CDS       27773535 chr6:17626162-17626163(-) m6A CDS       24284625//27773535 chr6:17626252-17626253(-) m6A CDS       24284625//24981863//27773535 chr6:17626358-17626359(-) m6A CDS       24284625 chr6:17629008-17629009(-) m6A CDS       24981863//27371828 chr6:17629111-17629112(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085 chr6:17629122-17629123(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085 chr6:17629230-17629231(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085 chr6:17629266-17629267(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085 chr6:17629275-17629276(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17629298-17629299(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17629390-17629391(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17629411-17629412(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17629477-17629478(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:17629567-17629568(-) m6A CDS       24284625//24981863//26404942//22608085 chr6:17629598-17629599(-) m6A CDS       24284625//24981863//26404942//22608085 chr6:17629680-17629681(-) m6A CDS       24284625//24981863//26404942//27371828//22608085 chr6:17629742-17629743(-) m6A CDS       24284625//24981863//26404942//27371828//22608085 chr6:17632939-17632940(-) m6A CDS       24284625 chr6:17632972-17632973(-) m6A CDS       24284625 chr6:17632989-17632990(-) m6A CDS       24284625 chr6:17637387-17637388(-) m6A CDS       24284625//27773535 chr6:17637418-17637419(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr6:17637542-17637543(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637593-17637594(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637600-17637601(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637608-17637609(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637639-17637640(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637687-17637688(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637697-17637698(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637710-17637711(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637731-17637732(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637752-17637753(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637764-17637765(-) m6A CDS       25456834//24981863//27371828 chr6:17637768-17637769(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637823-17637824(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637835-17637836(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr6:17637930-17637931(-) m6A CDS       24284625//24209618//27773535 chr6:17649397-17649398(-) m6A CDS       24981863//26404942//27773535 chr6:17688709-17688710(-) m6A CDS       24981863//26404942//27773535 chr6:17688748-17688749(-) m6A CDS       24981863//27773535 chr6:17706723-17706724(-) m6A 5'UTR       - chr6:17706736-17706737(-) m6A 5'UTR       - chr6:17706853-17706854(-) m6A 5'UTR       - chr6:17706895-17706896(-) m6A 5'UTR       - chr6:17706910-17706911(-) Gm 5'UTR       - chr6:17706933-17706934(-) m6A 5'UTR       - chr6:17706978-17706979(-) m6A 5'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NUP153	Chromatin HCC cell line (HepG2)|K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-1-5p
Interactor2: NUP153

Evidence Support:

Strong-Evidence	RISC-IP
Support Database	ViRBase

References:

PMID	20585629	Target region	5'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	HEK293 cells	Interactor2 expression	None
Description	Here, we identify cellular transcript targets of one of the most highly expressed HCMV encoded miRNAs, miR-US25-1, using a recently developed biochemical approach called RISC immunoprecipitation. Strikingly, the majority of identified transcripts contained miR-US25-1 target sites within the 5'UTR rather than the 3'UTR.