Basic Information:

  VIRBase ID:  

VHID00507928

  Virus:  

Human herpesvirus 5 strain AD169

  Host:  

Homo sapiens

  Confidence Score:  

0.7311

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-1-5p:  MIMAT0001581          LPGAT1:  NM_014873     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-1-5p	LPGAT1
miRBase Accession/Entrez ID	MIMAT0001581	9926
Organism	Human herpesvirus 5 strain AD169	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM34A//FAM34A1//NET8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LPGAT1	chr1:211975344(-) A-I      intronic chr1:211977295(-) A-I      intronic chr1:211977289(-) A-I      intronic chr1:211960773(-) A-I      intronic chr1:211960783(-) A-I      intronic chr1:211977276(-) A-I      intronic chr1:211977373(-) A-I      intronic chr1:211997088(-) A-I      intronic chr1:211971914(-) A-I      intronic chr1:211998655(-) A-I      intronic chr1:211997681(-) A-I      intronic chr1:211997675(-) A-I      intronic chr1:211997656(-) A-I      intronic chr1:211971942(-) A-I      intronic chr1:212002738(-) A-I      intronic chr1:211977328(-) A-I      intronic chr1:211993164(-) A-I      intronic chr1:211997590(-) A-I      intronic chr1:211944295(-) A-I      intronic chr1:211997610(-) A-I      intronic chr1:211997614(-) A-I      intronic chr1:211990844(-) A-I      intronic chr1:211992725(-) A-I      intronic chr1:211953459(-) A-I      intronic chr1:211997626(-) A-I      intronic chr1:211994486(-) A-I      intronic chr1:211944993(-) A-I      intronic chr1:211997638(-) A-I      intronic chr1:211997655(-) A-I      intronic chr1:211991468(-) A-I      intronic chr1:211929925(-) A-I      intronic chr1:211977681(-) A-I      intronic chr1:211997662(-) A-I      intronic chr1:211991427(-) A-I      intronic chr1:211977382(-) A-I      intronic chr1:211929509(-) A-I      intronic chr1:211947515(-) A-I      intronic chr1:211929495(-) A-I      intronic chr1:211979339(-) A-I      intronic chr1:211977351(-) A-I      intronic chr1:211977347(-) A-I      intronic chr1:211977343(-) A-I      intronic chr1:211979600(-) A-I      intronic chr1:211977294(-) A-I      intronic chr1:211975416(-) A-I      intronic chr1:211975408(-) A-I      intronic chr1:211975254(-) A-I      intronic chr1:211975224(-) A-I      intronic chr1:211975196(-) A-I      intronic chr1:211974963(-) A-I      intronic chr1:211974950(-) A-I      intronic chr1:211974835(-) A-I      intronic chr1:211974800(-) A-I      intronic chr1:211971898(-) A-I      intronic chr1:211971768(-) A-I      intronic chr1:211989253(-) A-I      intronic chr1:211970428(-) A-I      intronic chr1:211989259(-) A-I      intronic chr1:211989285(-) A-I      intronic chr1:211967937(-) A-I      intronic chr1:211967915(-) A-I      intronic chr1:211967875(-) A-I      intronic chr1:211967814(-) A-I      intronic chr1:211990731(-) A-I      intronic chr1:211990746(-) A-I      intronic chr1:211990789(-) A-I      intronic chr1:211967782(-) A-I      intronic chr1:211990813(-) A-I      intronic chr1:211966343(-) A-I      intronic chr1:211966289(-) A-I      intronic chr1:211929492(-) A-I      intronic chr1:211991344(-) A-I      intronic chr1:211992643(-) A-I      intronic chr1:211994596(-) A-I      intronic chr1:211991309(-) A-I      intronic chr1:211929386(-) A-I      intronic chr1:211944276(-) A-I      intronic chr1:211991292(-) A-I      intronic chr1:211944188(-) A-I      intronic chr1:211991288(-) A-I      intronic chr1:211944938(-) A-I      intronic chr1:211948625(-) A-I      intronic chr1:211992798(-) A-I      intronic chr1:211958181(-) A-I      intronic chr1:211991282(-) A-I      intronic chr1:211991273(-) A-I      intronic chr1:211997724(-) A-I      intronic chr1:211947583(-) A-I      intronic chr1:211948596(-) A-I      intronic chr1:211958198(-) A-I      intronic chr1:211958206(-) A-I      intronic chr1:211995951(-) A-I      intronic chr1:211958278(-) A-I      intronic chr1:211992800(-) A-I      intronic chr1:211958322(-) A-I      intronic chr1:211996001(-) A-I      intronic chr1:211959143(-) A-I      intronic chr1:211959176(-) A-I      intronic chr1:211992721(-) A-I      intronic chr1:211996037(-) A-I      intronic chr1:211997023(-) A-I      intronic chr1:211959199(-) A-I      intronic chr1:211998569(-) A-I      intronic chr1:211991269(-) A-I      intronic chr1:211959222(-) A-I      intronic chr1:211979439(-) A-I      intronic chr1:211977615(-) A-I      intronic chr1:211992812(-) A-I      intronic chr1:211991262(-) A-I      intronic chr1:211991253(-) A-I      intronic chr1:211940592(-) A-I      intronic chr1:211960786(-) A-I      intronic chr1:211992632(-) A-I      intronic chr1:211991345(-) A-I      intronic chr1:211991249(-) A-I      intronic chr1:211998580(-) A-I      intronic chr1:211965006(-) A-I      intronic chr1:211997062(-) A-I      intronic chr1:211940577(-) A-I      intronic chr1:211990830(-) A-I      intronic chr1:211944392(-) A-I      intronic chr1:211966064(-) A-I      intronic chr1:211966151(-) A-I      intronic chr1:211992651(-) A-I      intronic chr1:211979539(-) A-I      intronic chr1:211966164(-) A-I      intronic chr1:211979555(-) A-I      intronic chr1:211997220(-) A-I      intronic chr1:211966223(-) A-I      intronic chr1:211997559(-) A-I      intronic chr1:211993122(-) A-I      intronic chr1:211979568(-) A-I      intronic chr1:211998581(-) A-I      intronic chr1:211998636(-) A-I      intronic chr1:211998650(-) A-I      intronic chr1:211947564(-) A-I      intronic chr1:211998694(-) A-I      intronic chr1:211999240(-) A-I      intronic chr1:211999264(-) A-I      intronic chr1:211997589(-) A-I      intronic chr1:211940573(-) A-I      intronic chr1:211966225(-) A-I      intronic chr1:211959131(-) A-I      intronic chr1:211994584(-) A-I      intronic chr1:211998626(-) A-I      intronic chr1:211964941(-) A-I      intronic chr1:211929930(-) A-I      intronic chr1:211977445(-) A-I      intronic chr1:211994515(-) A-I      intronic chr1:211949836(-) A-I      intronic chr1:211944317(-) A-I      intronic chr1:211971968(-) A-I      intronic chr1:211929840(-) A-I      intronic chr1:211977512(-) A-I      intronic chr1:211991404(-) A-I      intronic chr1:211998649(-) A-I      intronic chr1:211970353(-) A-I      intronic chr1:211974880(-) A-I      intronic chr1:211974967(-) A-I      intronic chr1:211929879(-) A-I      intronic chr1:211967810(-) A-I      intronic chr1:211979566(-) A-I      intronic chr1:211947652(-) A-I      intronic chr1:211960576(-) A-I      intronic chr1:211933608(-) A-I      intronic chr1:211991179(-) A-I      intronic chr1:211996020(-) A-I      intronic chr1:211959127(-) A-I      intronic chr1:211959230(-) A-I      intronic chr1:211973635(-) A-I      intronic chr1:211991321(-) A-I      intronic chr1:211959126(-) A-I      intronic chr1:211957819(-) A-I      intronic chr1:211940578(-) A-I      intronic chr1:211945013(-) A-I      intronic chr1:211957677(-) A-I      intronic chr1:211945024(-) A-I      intronic chr1:211947637(-) A-I      intronic chr1:211973644(-) A-I      intronic chr1:211992576(-) A-I      intronic chr1:211949757(-) A-I      intronic chr1:211997702(-) A-I      intronic chr1:211958329(-) A-I      intronic chr1:211945009(-) A-I      intronic chr1:211964977(-) A-I      intronic chr1:211970489(-) A-I      intronic chr1:211990765(-) A-I      intronic chr1:211973533(-) A-I      intronic chr1:211947677(-) A-I      intronic chr1:211949716(-) A-I      intronic chr1:211965042(-) A-I      intronic chr1:211992579(-) A-I      intronic chr1:211975187(-) A-I      intronic chr1:211929450(-) A-I      intronic chr1:211930591(-) A-I      intronic chr1:211973582(-) A-I      intronic chr1:211979436(-) A-I      intronic chr1:211967898(-) A-I      intronic chr1:211971770(-) A-I      intronic chr1:211966913(-) A-I      intronic chr1:211991356(-) A-I      intronic chr1:211967671(-) A-I      intronic chr1:211971761(-) A-I      intronic chr1:211959167(-) A-I      intronic chr1:211974791(-) A-I      intronic chr1:211929842(-) A-I      intronic chr1:211949108(-) A-I      intronic chr1:211977305(-) A-I      intronic chr1:211964884(-) A-I      intronic chr1:211992720(-) A-I      intronic chr1:211968982(-) A-I      intronic chr1:211947601(-) A-I      intronic chr1:211973449(-) A-I      intronic chr1:211944213(-) A-I      intronic chr1:211949079(-) A-I      intronic chr1:211944291(-) A-I      intronic chr1:211970706(-) A-I      intronic chr1:211931856(-) A-I      intronic chr1:211996008(-) A-I      intronic chr1:211991433(-) A-I      intronic chr1:211992775(-) A-I      intronic chr1:211973709(-) A-I      intronic chr1:211951232(-) A-I      intronic chr1:211959100(-) A-I      intronic chr1:211974934(-) A-I      intronic chr1:211968874(-) A-I      intronic chr1:211957651(-) A-I      intronic chr1:211973473(-) A-I      intronic chr1:211989292(-) A-I      intronic chr1:211958326(-) A-I      intronic chr1:211944387(-) A-I      intronic chr1:211991450(-) A-I      intronic chr1:211997566(-) A-I      intronic chr1:211977297(-) A-I      intronic chr1:211971965(-) A-I      intronic chr1:211982283(-) A-I      intronic chr1:211974836(-) A-I      intronic chr1:211985017(-) A-I      intronic chr1:211971860(-) A-I      intronic chr1:211964927(-) A-I      intronic chr1:211944942(-) A-I      intronic chr1:211970380(-) A-I      intronic chr1:211998631(-) A-I      intronic chr1:211964838(-) A-I      intronic chr1:211964989(-) A-I      intronic chr1:211975256(-) A-I      intronic chr1:211967683(-) A-I      intronic chr1:211959122(-) A-I      intronic chr1:211971973(-) A-I      intronic chr1:211989351(-) A-I      intronic chr1:211997251(-) A-I      intronic chr1:211991371(-) A-I      intronic chr1:211971858(-) A-I      intronic chr1:211947678(-) A-I      intronic chr1:211960799(-) A-I      intronic chr1:211974968(-) A-I      intronic chr1:211977175(-) A-I      intronic chr1:211944246(-) A-I      intronic chr1:211964942(-) A-I      intronic chr1:211971810(-) A-I      intronic chr1:211977643(-) A-I      intronic chr1:211973509(-) A-I      intronic chr1:211973429(-) A-I      intronic chr1:211982375(-) A-I      intronic chr1:211977296(-) A-I      intronic chr1:211975322(-) A-I      intronic chr1:211958310(-) A-I      intronic chr1:211965003(-) A-I      intronic chr1:211998688(-) A-I      intronic chr1:211960669(-) A-I      intronic chr1:211977619(-) A-I      intronic chr1:211947574(-) A-I      intronic chr1:211957797(-) A-I      intronic chr1:211971940(-) A-I      intronic chr1:211966242(-) A-I      intronic chr1:211945112(-) A-I      intronic chr1:211998596(-) A-I      intronic chr1:211957814(-) A-I      intronic chr1:211993243(-) A-I      intronic chr1:211971809(-) A-I      intronic chr1:211957685(-) A-I      intronic chr1:211975242(-) A-I      intronic chr1:211991458(-) A-I      intronic chr1:211974940(-) A-I      intronic chr1:211963161(-) A-I      intronic chr1:211959191(-) A-I      intronic chr1:211993244(-) A-I      intronic chr1:211998612(-) A-I      intronic chr1:211977304(-) A-I      intronic chr1:211929727(-) A-I      intronic chr1:211959045(-) A-I      intronic chr1:211997719(-) A-I      intronic chr1:211993084(-) A-I      intronic chr1:211947619(-) A-I      intronic chr1:211977493(-) A-I      intronic chr1:211999219(-) A-I      intronic chr1:211947636(-) A-I      intronic chr1:211994498(-) A-I      intronic chr1:211970372(-) A-I      intronic chr1:211966236(-) A-I      intronic chr1:211973521(-) A-I      intronic chr1:211960675(-) A-I      intronic chr1:211966232(-) A-I      intronic chr1:211945040(-) A-I      intronic chr1:211991350(-) A-I      intronic chr1:211945126(-) A-I      intronic chr1:211991369(-) A-I      intronic chr1:211973567(-) A-I      intronic chr1:211979520(-) A-I      intronic chr1:211989193(-) A-I      intronic chr1:211965002(-) A-I      intronic chr1:211975177(-) A-I      intronic chr1:211977233(-) A-I      intronic chr1:211960747(-) A-I      intronic chr1:211973475(-) A-I      intronic chr1:211929430(-) A-I      intronic chr1:211989249(-) A-I      intronic chr1:211990801(-) A-I      intronic chr1:211971910(-) A-I      intronic chr1:211979493(-) A-I      intronic chr1:211947700(-) A-I      intronic chr1:211977224(-) A-I      intronic chr1:211994516(-) A-I      intronic chr1:211999263(-) A-I      intronic chr1:211947573(-) A-I      intronic chr1:211929839(-) A-I      intronic chr1:211947582(-) A-I      intronic chr1:211930520(-) A-I      intronic chr1:211966233(-) A-I      intronic chr1:211977170(-) A-I      intronic chr1:211966136(-) A-I      intronic chr1:211966280(-) A-I      intronic chr1:211990791(-) A-I      intronic chr1:211970341(-) A-I      intronic chr1:211979384(-) A-I      intronic chr1:211977665(-) A-I      intronic chr1:211958284(-) A-I      intronic chr1:211998671(-) A-I      intronic chr1:211974842(-) A-I      intronic chr1:211977596(-) A-I      intronic chr1:211979519(-) A-I      intronic chr1:211970432(-) A-I      intronic chr1:211970381(-) A-I      intronic chr1:211991370(-) A-I      intronic chr1:211966182(-) A-I      intronic chr1:211967912(-) A-I      intronic chr1:211973642(-) A-I      intronic chr1:211995875(-) A-I      intronic chr1:211974887(-) A-I      intronic chr1:211997678(-) A-I      intronic chr1:211960632(-) A-I      intronic chr1:211971862(-) A-I      intronic chr1:211947544(-) A-I      intronic chr1:211996038(-) A-I      intronic chr1:211947560(-) A-I      intronic chr1:211998654(-) A-I      intronic chr1:211995953(-) A-I      intronic chr1:211967047(-) A-I      intronic chr1:211966860(-) A-I      intronic chr1:211947590(-) A-I      intronic chr1:211944983(-) A-I      intronic chr1:211975318(-) A-I      intronic chr1:211975394(-) A-I      intronic chr1:211963131(-) A-I      intronic chr1:211958335(-) A-I      intronic chr1:211979494(-) A-I      intronic chr1:211960748(-) A-I      intronic chr1:211973597(-) A-I      intronic chr1:211975348(-) A-I      intronic chr1:211966872(-) A-I      intronic chr1:211979422(-) A-I      intronic chr1:211967914(-) A-I      intronic chr1:211929775(-) A-I      intronic chr1:211977279(-) A-I      intronic chr1:211959128(-) A-I      intronic chr1:211945023(-) A-I      intronic chr1:211977200(-) A-I      intronic chr1:211958325(-) A-I      intronic chr1:211975259(-) A-I      intronic chr1:211964924(-) A-I      intronic chr1:211957750(-) A-I      intronic chr1:211975204(-) A-I      intronic chr1:211973636(-) A-I      intronic chr1:211975396(-) A-I      intronic chr1:211991428(-) A-I      intronic chr1:211990697(-) A-I      intronic chr1:211945014(-) A-I      intronic chr1:211985092(-) A-I      intronic chr1:211957792(-) A-I      intronic chr1:211996081(-) A-I      intronic chr1:211994476(-) A-I      intronic chr1:211932700(-) A-I      intronic chr1:211997616(-) A-I      intronic chr1:211958323(-) A-I      intronic chr1:211966829(-) A-I      intronic chr1:211973658(-) A-I      intronic chr1:211973515(-) A-I      intronic chr1:211991315(-) A-I      intronic chr1:211971854(-) A-I      intronic chr1:211991346(-) A-I      intronic chr1:211994432(-) A-I      intronic chr1:211967772(-) A-I      intronic chr1:211973474(-) A-I      intronic chr1:211973415(-) A-I      intronic chr1:211971943(-) A-I      intronic chr1:211947725(-) A-I      intronic chr1:211995874(-) A-I      intronic chr1:211960609(-) A-I      intronic chr1:211929900(-) A-I      intronic chr1:211991305(-) A-I      intronic chr1:211966218(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	LPGAT1	chr1:211968982(-) A-I intron -    22327324 chr1:211970432(-) A-I intron -    22327324 chr1:211916905(-) A-I exon 3'UTR    21960545 chr1:211973515(-) A-I intron -    21960545 chr1:211997616(-) A-I intron -    21960545 chr1:211998654(-) A-I intron -    21960545 chr1:211921995(-) T-G exon 3'UTR    22484847 chr1:211922034(-) T-C exon 3'UTR    22484847 chr1:211922035(-) C-T exon 3'UTR    22484847 chr1:211929775(-) A-G intron -    22484847 chr1:211940578(-) A-G intron -    22484847 chr1:211944213(-) A-G intron -    22484847 chr1:211944317(-) A-G intron -    22484847 chr1:211944387(-) A-G intron -    22484847 chr1:211945023(-) A-G intron -    22484847 chr1:211945126(-) A-G intron -    22484847 chr1:211947652(-) A-G intron -    22484847 chr1:211947678(-) A-G intron -    22484847 chr1:211947725(-) A-G intron -    22484847 chr1:211949079(-) A-G intron -    22484847 chr1:211949108(-) A-G intron -    22484847 chr1:211953223(-) A-G intron -    22484847 chr1:211953257(-) G-A intron -    22484847 chr1:211957677(-) A-G intron -    22484847 chr1:211957750(-) A-G intron -    22484847 chr1:211957792(-) A-G intron -    22484847 chr1:211957797(-) A-G intron -    22484847 chr1:211957814(-) A-G intron -    22484847 chr1:211957819(-) A-G intron -    22484847 chr1:211958284(-) A-G intron -    22484847 chr1:211958323(-) A-G intron -    22484847 chr1:211958326(-) A-G intron -    22484847 chr1:211958329(-) A-G intron -    22484847 chr1:211959045(-) A-G intron -    22484847 chr1:211959100(-) A-G intron -    22484847 chr1:211959122(-) A-G intron -    22484847 chr1:211959126(-) A-G intron -    22484847 chr1:211959127(-) A-G intron -    22484847 chr1:211959128(-) A-G intron -    22484847 chr1:211959131(-) A-G intron -    22484847 chr1:211959191(-) A-G intron -    22484847 chr1:211959230(-) A-G intron -    22484847 chr1:211960669(-) A-G intron -    22484847 chr1:211960747(-) A-G intron -    22484847 chr1:211960799(-) A-G intron -    22484847 chr1:211963131(-) A-G intron -    22484847 chr1:211963161(-) A-G intron -    22484847 chr1:211964838(-) A-G intron -    22484847 chr1:211965002(-) A-G intron -    22484847 chr1:211966136(-) A-G intron -    22484847 chr1:211966233(-) A-G intron -    22484847 chr1:211966236(-) A-G intron -    22484847 chr1:211966242(-) A-G intron -    22484847 chr1:211966280(-) A-G intron -    22484847 chr1:211966913(-) A-G intron -    22484847 chr1:211967047(-) A-G intron -    22484847 chr1:211967671(-) A-G intron -    22484847 chr1:211967772(-) A-G intron -    22484847 chr1:211967914(-) A-G intron -    22484847 chr1:211968874(-) A-G intron -    22484847 chr1:211968982(-) A-G intron -    22484847 chr1:211970353(-) A-G intron -    22484847 chr1:211970372(-) A-G intron -    22484847 chr1:211970380(-) A-G intron -    22484847 chr1:211970381(-) A-G intron -    22484847 chr1:211970432(-) A-G intron -    22484847 chr1:211971858(-) A-G intron -    22484847 chr1:211971910(-) A-G intron -    22484847 chr1:211973415(-) A-G intron -    22484847 chr1:211973429(-) A-G intron -    22484847 chr1:211973474(-) A-G intron -    22484847 chr1:211973475(-) A-G intron -    22484847 chr1:211973515(-) A-G intron -    22484847 chr1:211973635(-) A-G intron -    22484847 chr1:211973642(-) A-G intron -    22484847 chr1:211973658(-) A-G intron -    22484847 chr1:211974836(-) A-G intron -    22484847 chr1:211974842(-) A-G intron -    22484847 chr1:211974880(-) A-G intron -    22484847 chr1:211975177(-) A-G intron -    22484847 chr1:211975187(-) A-G intron -    22484847 chr1:211975204(-) A-G intron -    22484847 chr1:211975242(-) A-G intron -    22484847 chr1:211975256(-) A-G intron -    22484847 chr1:211975259(-) A-G intron -    22484847 chr1:211975447(-) C-T intron -    22484847 chr1:211975455(-) C-T intron -    22484847 chr1:211977297(-) A-G intron -    22484847 chr1:211977493(-) A-G intron -    22484847 chr1:211977596(-) A-G intron -    22484847 chr1:211979436(-) A-G intron -    22484847 chr1:211979494(-) A-G intron -    22484847 chr1:211979519(-) A-G intron -    22484847 chr1:211979520(-) A-G intron -    22484847 chr1:211979566(-) A-G intron -    22484847 chr1:211989249(-) A-G intron -    22484847 chr1:211989351(-) A-G intron -    22484847 chr1:211990697(-) A-G intron -    22484847 chr1:211990801(-) A-G intron -    22484847 chr1:211991301(-) G-A intron -    22484847 chr1:211991302(-) C-T intron -    22484847 chr1:211991305(-) A-G intron -    22484847 chr1:211991315(-) A-G intron -    22484847 chr1:211991321(-) A-G intron -    22484847 chr1:211991350(-) A-G intron -    22484847 chr1:211991356(-) A-G intron -    22484847 chr1:211991369(-) A-G intron -    22484847 chr1:211991370(-) A-G intron -    22484847 chr1:211991404(-) A-G intron -    22484847 chr1:211991428(-) A-G intron -    22484847 chr1:211991433(-) A-G intron -    22484847 chr1:211991450(-) A-G intron -    22484847 chr1:211991458(-) A-G intron -    22484847 chr1:211992579(-) A-G intron -    22484847 chr1:211992775(-) A-G intron -    22484847 chr1:211993243(-) A-G intron -    22484847 chr1:211993244(-) A-G intron -    22484847 chr1:211994476(-) A-G intron -    22484847 chr1:211994498(-) A-G intron -    22484847 chr1:211996008(-) A-G intron -    22484847 chr1:211996020(-) A-G intron -    22484847 chr1:211996038(-) A-G intron -    22484847 chr1:211996081(-) A-G intron -    22484847 chr1:211997251(-) A-G intron -    22484847 chr1:211997566(-) A-G intron -    22484847 chr1:211997616(-) A-G intron -    22484847 chr1:211997719(-) A-G intron -    22484847 chr1:211998612(-) A-G intron -    22484847 chr1:211998626(-) A-G intron -    22484847 chr1:211998631(-) A-G intron -    22484847 chr1:211998654(-) A-G intron -    22484847 chr1:211998688(-) A-G intron -    22484847 chr1:211999219(-) A-G intron -    22484847 chr1:211999263(-) A-G intron -    22484847 chr1:211999301(-) G-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LPGAT1	chr1:211917051-211917052(-) Cm 3'UTR       - chr1:211918992-211918993(-) m6A 3'UTR       24981863//28052920 chr1:211919019-211919020(-) m6A 3'UTR       24981863//28052920 chr1:211919024-211919025(-) m6A 3'UTR       24981863//28052920 chr1:211919134-211919135(-) m6A 3'UTR       24981863//26404942 chr1:211919140-211919141(-) m6A 3'UTR       24981863//26404942 chr1:211919155-211919156(-) m6A 3'UTR       24981863//26404942 chr1:211920797-211920798(-) m6A 3'UTR       27773535 chr1:211920830-211920831(-) m6A 3'UTR       27773535 chr1:211920887-211920888(-) m6A 3'UTR       27773535 chr1:211922260-211922261(-) m6A 3'UTR       26404942 chr1:211922275-211922276(-) m6A 3'UTR       26404942 chr1:211922701-211922702(-) m6A 3'UTR       24981863 chr1:211922724-211922725(-) m6A 3'UTR       24981863 chr1:211922747-211922748(-) m6A 3'UTR       24981863 chr1:211922775-211922776(-) m6A 3'UTR       24981863 chr1:211922808-211922809(-) m6A 3'UTR       24981863 chr1:211922947-211922948(-) m6A 3'UTR       26404942//27773535 chr1:211922991-211922992(-) m6A 3'UTR       26404942//27773535 chr1:211923032-211923033(-) m6A 3'UTR       24981863//26404942//27773535 chr1:211923199-211923200(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr1:211923227-211923228(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr1:211956717-211956718(-) m6A CDS//intron       27773535 chr1:211960976-211960977(-) m6A CDS//intron       27773535 chr1:211960989-211960990(-) m6A CDS//intron       27773535 chr1:211961019-211961020(-) m6A CDS//intron       27773535 chr1:211966416-211966417(-) m6A CDS//exon       24981863 chr1:211966423-211966424(-) m6A CDS//exon       24981863 chr1:211966549-211966550(-) m6A exon//intron       24981863 chr1:211966654-211966655(-) m6A exon//intron       27773535 chr1:212003571-212003572(-) m6A 5'UTR//exon//intron       27773536 chr1:212004073-212004074(-) m6A 5'UTR       24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LPGAT1	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol HCC cell line (HepG2)|K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-1-5p
Interactor2: LPGAT1

Evidence Support:

Strong-Evidence	RISC-IP
Support Database	ViRBase

References:

PMID	20585629	Target region	5'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	HEK293 cells	Interactor2 expression	None
Description	Here, we identify cellular transcript targets of one of the most highly expressed HCMV encoded miRNAs, miR-US25-1, using a recently developed biochemical approach called RISC immunoprecipitation. Strikingly, the majority of identified transcripts contained miR-US25-1 target sites within the 5'UTR rather than the 3'UTR.