Basic Information:

  VIRBase ID:  

VHID00506987

  Virus:  

Human herpesvirus 5 strain AD169

  Host:  

Homo sapiens

  Confidence Score:  

0.7311

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-1-5p:  MIMAT0001581          EIF3A:  NM_003750     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-1-5p	EIF3A
miRBase Accession/Entrez ID	MIMAT0001581	8661
Organism	Human herpesvirus 5 strain AD169	Homo sapiens
Category	miRNA	mRNA
Alias	-	EIF3//eIF3-p170//eIF3-theta//EIF3S10//P167//p180//p185//TIF32

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EIF3A	chr10:120823483(-) A-I      intronic chr10:120808356(-) A-I      intronic chr10:120808328(-) A-I      intronic chr10:120806658(-) A-I      intronic chr10:120814128(-) A-I      intronic chr10:120814637(-) A-I      intronic chr10:120804633(-) A-I      intronic chr10:120804730(-) A-I      intronic chr10:120808401(-) A-I      intronic chr10:120806645(-) A-I      intronic chr10:120828300(-) A-I      intronic chr10:120808376(-) A-I      intronic chr10:120825516(-) A-I      intronic chr10:120834556(-) A-I      intronic chr10:120832037(-) A-I      intronic chr10:120831348(-) A-I      intronic chr10:120834297(-) A-I      intronic chr10:120828064(-) A-I      intronic chr10:120827516(-) A-I      intronic chr10:120828137(-) A-I      intronic chr10:120822472(-) A-I      intronic chr10:120834280(-) A-I      intronic chr10:120828101(-) A-I      intronic chr10:120834235(-) A-I      intronic chr10:120834644(-) A-I      intronic chr10:120823459(-) A-I      intronic chr10:120813012(-) A-I      intronic chr10:120804187(-) A-I      intronic chr10:120826986(-) A-I      intronic chr10:120832145(-) A-I      intronic chr10:120828076(-) A-I      intronic chr10:120834189(-) A-I      intronic chr10:120823438(-) A-I      intronic chr10:120813056(-) A-I      intronic chr10:120832143(-) A-I      intronic chr10:120827517(-) A-I      intronic chr10:120834201(-) A-I      intronic chr10:120832171(-) A-I      intronic chr10:120804661(-) A-I      intronic chr10:120827542(-) A-I      intronic chr10:120827526(-) A-I      intronic chr10:120824441(-) A-I      intronic chr10:120804660(-) A-I      intronic chr10:120832129(-) A-I      intronic chr10:120832041(-) A-I      intronic chr10:120827591(-) A-I      intronic chr10:120837346(-) A-I      intronic chr10:120832025(-) A-I      intronic chr10:120831974(-) A-I      intronic chr10:120804171(-) A-I      intronic chr10:120804732(-) A-I      intronic chr10:120834234(-) A-I      intronic chr10:120827065(-) A-I      intronic chr10:120833865(-) A-I      intronic chr10:120825626(-) A-I      intronic chr10:120834551(-) A-I      intronic chr10:120825571(-) A-I      intronic chr10:120825519(-) A-I      intronic chr10:120825504(-) A-I      intronic chr10:120824449(-) A-I      intronic chr10:120813113(-) A-I      intronic chr10:120824440(-) A-I      intronic chr10:120824416(-) A-I      intronic chr10:120824401(-) A-I      intronic chr10:120824400(-) A-I      intronic chr10:120824357(-) A-I      intronic chr10:120824348(-) A-I      intronic chr10:120824287(-) A-I      intronic chr10:120823589(-) A-I      intronic chr10:120823425(-) A-I      intronic chr10:120823377(-) A-I      intronic chr10:120822371(-) A-I      intronic chr10:120831373(-) A-I      intronic chr10:120826981(-) A-I      intronic chr10:120808815(-) A-I      intronic chr10:120805360(-) A-I      intronic chr10:120804738(-) A-I      intronic chr10:120825841(-) A-I      intronic chr10:120814010(-) A-I      intronic chr10:120814163(-) A-I      intronic chr10:120814022(-) A-I      intronic chr10:120813610(-) A-I      intronic chr10:120813606(-) A-I      intronic chr10:120813518(-) A-I      intronic chr10:120813505(-) A-I      intronic chr10:120813206(-) A-I      intronic chr10:120813102(-) A-I      intronic chr10:120813020(-) A-I      intronic chr10:120812130(-) A-I      intronic chr10:120812068(-) A-I      intronic chr10:120812062(-) A-I      intronic chr10:120812060(-) A-I      intronic chr10:120808396(-) A-I      intronic chr10:120808365(-) A-I      intronic chr10:120808351(-) A-I      intronic chr10:120808347(-) A-I      intronic chr10:120808322(-) A-I      intronic chr10:120808321(-) A-I      intronic chr10:120832002(-) A-I      intronic chr10:120811932(-) A-I      intronic chr10:120824325(-) A-I      intronic chr10:120808460(-) A-I      intronic chr10:120808312(-) A-I      intronic chr10:120808276(-) A-I      intronic chr10:120808219(-) A-I      intronic chr10:120808214(-) A-I      intronic chr10:120806734(-) A-I      intronic chr10:120825506(-) A-I      intronic chr10:120825439(-) A-I      intronic chr10:120833727(-) A-I      intronic chr10:120814158(-) A-I      intronic chr10:120835680(-) A-I      intronic chr10:120823528(-) A-I      intronic chr10:120834561(-) A-I      intronic chr10:120806733(-) A-I      intronic chr10:120836887(-) A-I      intronic chr10:120805354(-) A-I      intronic chr10:120808289(-) A-I      intronic chr10:120827943(-) A-I      intronic chr10:120806642(-) A-I      intronic chr10:120834521(-) A-I      intronic chr10:120806632(-) A-I      intronic chr10:120806554(-) A-I      intronic chr10:120813557(-) A-I      intronic chr10:120805368(-) A-I      intronic chr10:120804712(-) A-I      intronic chr10:120837191(-) A-I      intronic chr10:120804273(-) A-I      intronic chr10:120804636(-) A-I      intronic chr10:120804356(-) A-I      intronic chr10:120823558(-) A-I      intronic chr10:120813470(-) A-I      intronic chr10:120804463(-) A-I      intronic chr10:120813125(-) A-I      intronic chr10:120835767(-) A-I      intronic chr10:120832103(-) A-I      intronic chr10:120804304(-) A-I      intronic chr10:120814675(-) A-I      intronic chr10:120822406(-) A-I      intronic chr10:120835737(-) A-I      intronic chr10:120804248(-) A-I      intronic chr10:120836854(-) A-I      intronic chr10:120826991(-) A-I      intronic chr10:120823515(-) A-I      intronic chr10:120813006(-) A-I      intronic chr10:120822424(-) A-I      intronic chr10:120814192(-) A-I      intronic chr10:120827500(-) A-I      intronic chr10:120827574(-) A-I      intronic chr10:120825464(-) A-I      intronic chr10:120835350(-) A-I      intronic chr10:120805351(-) A-I      intronic chr10:120814676(-) A-I      intronic chr10:120812047(-) A-I      intronic chr10:120822518(-) A-I      intronic chr10:120834602(-) A-I      intronic chr10:120826897(-) A-I      intronic chr10:120824415(-) A-I      intronic chr10:120827613(-) A-I      intronic chr10:120823403(-) A-I      intronic chr10:120827460(-) A-I      intronic chr10:120833811(-) A-I      intronic chr10:120827395(-) A-I      intronic chr10:120804236(-) A-I      intronic chr10:120828066(-) A-I      intronic chr10:120827419(-) A-I      intronic chr10:120822540(-) A-I      intronic chr10:120822388(-) A-I      intronic chr10:120804202(-) A-I      intronic chr10:120804196(-) A-I      intronic chr10:120825622(-) A-I      intronic chr10:120803239(-) A-I      intronic chr10:120813675(-) A-I      intronic chr10:120814598(-) A-I      intronic chr10:120805279(-) A-I      intronic chr10:120832170(-) A-I      intronic chr10:120812155(-) A-I      intronic chr10:120804562(-) A-I      intronic chr10:120804104(-) A-I      intronic chr10:120824426(-) A-I      intronic chr10:120813565(-) A-I      intronic chr10:120808987(-) A-I      intronic chr10:120804514(-) A-I      intronic chr10:120834647(-) A-I      intronic chr10:120824292(-) A-I      intronic chr10:120804303(-) A-I      intronic chr10:120836720(-) A-I      intronic chr10:120823491(-) A-I      intronic chr10:120812167(-) A-I      intronic chr10:120808295(-) A-I      intronic chr10:120811934(-) A-I      intronic chr10:120804260(-) A-I      intronic chr10:120836851(-) A-I      intronic chr10:120812161(-) A-I      intronic chr10:120812106(-) A-I      intronic chr10:120808307(-) A-I      intronic chr10:120805291(-) A-I      intronic chr10:120805275(-) A-I      intronic chr10:120804703(-) A-I      intronic chr10:120805343(-) A-I      intronic chr10:120813500(-) A-I      intronic chr10:120835729(-) A-I      intronic chr10:120828040(-) A-I      intronic chr10:120836954(-) A-I      intronic chr10:120826701(-) A-I      intronic chr10:120804613(-) A-I      intronic chr10:120835655(-) A-I      intronic chr10:120813570(-) A-I      intronic chr10:120831259(-) A-I      intronic chr10:120808442(-) A-I      intronic chr10:120835364(-) A-I      intronic chr10:120835758(-) A-I      intronic chr10:120808891(-) A-I      intronic chr10:120804354(-) A-I      intronic chr10:120822325(-) A-I      intronic chr10:120827518(-) A-I      intronic chr10:120826988(-) A-I      intronic chr10:120804572(-) A-I      intronic chr10:120808290(-) A-I      intronic chr10:120836779(-) A-I      intronic chr10:120834612(-) A-I      intronic chr10:120831415(-) A-I      intronic chr10:120804645(-) A-I      intronic chr10:120836265(-) A-I      intronic chr10:120832218(-) A-I      intronic chr10:120824368(-) A-I      intronic chr10:120835798(-) A-I      intronic chr10:120826665(-) A-I      intronic chr10:120812115(-) A-I      intronic chr10:120812979(-) A-I      intronic chr10:120813597(-) A-I      intronic chr10:120804277(-) A-I      intronic chr10:120808917(-) A-I      intronic chr10:120827100(-) A-I      intronic chr10:120814504(-) A-I      intronic chr10:120812123(-) A-I      intronic chr10:120804529(-) A-I      intronic chr10:120834611(-) A-I      intronic chr10:120835762(-) A-I      intronic chr10:120808755(-) A-I      intronic chr10:120832057(-) A-I      intronic chr10:120804373(-) A-I      intronic chr10:120813660(-) A-I      intronic chr10:120834638(-) A-I      intronic chr10:120812091(-) A-I      intronic chr10:120812967(-) A-I      intronic chr10:120804319(-) A-I      intronic chr10:120814477(-) A-I      intronic chr10:120827461(-) A-I      intronic chr10:120805251(-) A-I      intronic chr10:120832161(-) A-I      intronic chr10:120827519(-) A-I      intronic chr10:120836916(-) A-I      intronic chr10:120808411(-) A-I      intronic chr10:120822561(-) A-I      intronic chr10:120804251(-) A-I      intronic chr10:120836855(-) A-I      intronic chr10:120812101(-) A-I      intronic chr10:120827588(-) A-I      intronic chr10:120805246(-) A-I      intronic chr10:120812160(-) A-I      intronic chr10:120836841(-) A-I      intronic chr10:120823432(-) A-I      intronic chr10:120812063(-) A-I      intronic chr10:120808780(-) A-I      intronic chr10:120804729(-) A-I      intronic chr10:120837205(-) A-I      intronic chr10:120804625(-) A-I      intronic chr10:120804736(-) A-I      intronic chr10:120823585(-) A-I      intronic chr10:120832033(-) A-I      intronic chr10:120822461(-) A-I      intronic chr10:120826645(-) A-I      intronic chr10:120825899(-) A-I      intronic chr10:120834383(-) A-I      intronic chr10:120814157(-) A-I      intronic chr10:120831461(-) A-I      intronic chr10:120831490(-) A-I      intronic chr10:120804358(-) A-I      intronic chr10:120814572(-) A-I      intronic chr10:120813581(-) A-I      intronic chr10:120814116(-) A-I      intronic chr10:120812025(-) A-I      intronic chr10:120832089(-) A-I      intronic chr10:120804297(-) A-I      intronic chr10:120813213(-) A-I      intronic chr10:120806545(-) A-I      intronic chr10:120808305(-) A-I      intronic chr10:120804238(-) A-I      intronic chr10:120806617(-) A-I      intronic chr10:120809152(-) A-I      intronic chr10:120835606(-) A-I      intronic chr10:120823479(-) A-I      intronic chr10:120832111(-) A-I      intronic chr10:120823522(-) A-I      intronic chr10:120822519(-) A-I      intronic chr10:120832149(-) A-I      intronic chr10:120832246(-) A-I      intronic chr10:120809164(-) A-I      intronic chr10:120831370(-) A-I      intronic chr10:120836880(-) A-I      intronic chr10:120808924(-) A-I      intronic chr10:120808454(-) A-I      intronic chr10:120804522(-) A-I      intronic chr10:120813115(-) A-I      intronic chr10:120832102(-) A-I      intronic chr10:120825447(-) A-I      intronic chr10:120804621(-) A-I      intronic chr10:120804684(-) A-I      intronic chr10:120804595(-) A-I      intronic chr10:120823578(-) A-I      intronic chr10:120808299(-) A-I      intronic chr10:120826695(-) A-I      intronic chr10:120835809(-) A-I      intronic chr10:120823508(-) A-I      intronic chr10:120808331(-) A-I      intronic chr10:120827556(-) A-I      intronic chr10:120812064(-) A-I      intronic chr10:120812054(-) A-I      intronic chr10:120835519(-) A-I      intronic chr10:120808834(-) A-I      intronic chr10:120834181(-) A-I      intronic chr10:120814118(-) A-I      intronic chr10:120804560(-) A-I      intronic chr10:120835358(-) A-I      intronic chr10:120804573(-) A-I      intronic chr10:120806631(-) A-I      intronic chr10:120808433(-) A-I      intronic chr10:120827388(-) A-I      intronic chr10:120824468(-) A-I      intronic chr10:120814212(-) A-I      intronic chr10:120827345(-) A-I      intronic chr10:120812082(-) A-I      intronic chr10:120812708(-) A-I      intronic chr10:120825480(-) A-I      intronic chr10:120824423(-) A-I      intronic chr10:120805352(-) A-I      intronic chr10:120827352(-) A-I      intronic chr10:120823496(-) A-I      intronic chr10:120834701(-) A-I      intronic chr10:120813571(-) A-I      intronic chr10:120825565(-) A-I      intronic chr10:120812120(-) A-I      intronic chr10:120834677(-) A-I      intronic chr10:120814505(-) A-I      intronic chr10:120808750(-) A-I      intronic chr10:120834541(-) A-I      intronic chr10:120834667(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	EIF3A	chr10:120823403(-) A-I intron -    15342557 chr10:120823459(-) A-I intron -    15342557   //15258596 chr10:120823496(-) A-I intron -    15342557   //15258596 chr10:120823515(-) A-I intron -    15342557   //15258596 chr10:120823522(-) A-I intron -    15342557   //15258596 chr10:120823528(-) A-I intron -    15342557   //15258596 chr10:120823558(-) A-I intron -    15342557   //15258596 chr10:120824292(-) A-I intron -    15342557   //15258596 chr10:120824325(-) A-I intron -    15342557   //15258596 chr10:120824368(-) A-I intron -    15342557   //15258596 chr10:120824415(-) A-I intron -    15342557   //15258596 chr10:120824423(-) A-I intron -    15342557   //15258596 chr10:120812025(-) A-I intron -    22327324 chr10:120812047(-) A-I intron -    22327324 chr10:120812123(-) A-I intron -    22327324 chr10:120813213(-) A-I intron -    22327324 chr10:120804303(-) A-G intron -    22484847 chr10:120804529(-) A-G intron -    22484847 chr10:120812025(-) A-G intron -    22484847 chr10:120812047(-) A-G intron -    22484847 chr10:120812064(-) A-G intron -    22484847 chr10:120812120(-) A-G intron -    22484847 chr10:120812123(-) A-G intron -    22484847 chr10:120812160(-) A-G intron -    22484847 chr10:120812161(-) A-G intron -    22484847 chr10:120813213(-) A-G intron -    22484847 chr10:120813565(-) A-G intron -    22484847 chr10:120813570(-) A-G intron -    22484847 chr10:120813571(-) A-G intron -    22484847 chr10:120813675(-) A-G intron -    22484847 chr10:120814118(-) A-G intron -    22484847 chr10:120814212(-) A-G intron -    22484847 chr10:120822518(-) A-G intron -    22484847 chr10:120826981(-) A-G intron -    22484847 chr10:120836855(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EIF3A	chr10:120795290-120795291(-) m6A 3'UTR       24981863//22608085 chr10:120795359-120795360(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr10:120795419-120795420(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr10:120795528-120795529(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr10:120795567-120795568(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr10:120795578-120795579(-) Am CDS       - chr10:120795585-120795586(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr10:120795668-120795669(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr10:120795674-120795675(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120795686-120795687(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120795725-120795726(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120796632-120796633(-) m1A CDS       26863196 chr10:120796658-120796659(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120796668-120796669(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120796767-120796768(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120796796-120796797(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120797754-120797755(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120797794-120797795(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120797812-120797813(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120797836-120797837(-) Am CDS       - chr10:120797848-120797849(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120797866-120797867(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120801521-120801522(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120801536-120801537(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120801606-120801607(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120801677-120801678(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120801920-120801921(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120801927-120801928(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120801940-120801941(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120801957-120801958(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120801968-120801969(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120801983-120801984(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120802008-120802009(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120802017-120802018(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr10:120802178-120802179(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr10:120802236-120802237(-) Gm CDS       - chr10:120802251-120802252(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr10:120803606-120803607(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120809339-120809340(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr10:120809357-120809358(-) Tm CDS       - chr10:120809412-120809413(-) m1A CDS       26863196 chr10:120810034-120810035(-) Am CDS       - chr10:120810045-120810046(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr10:120810174-120810175(-) m6A CDS       24209618//24981863//27773535//22575960//22608085 chr10:120810180-120810181(-) m6A CDS       24209618//24981863//27773535//22575960//22608085 chr10:120810762-120810763(-) m6A CDS       24981863//27773535//22575960 chr10:120810794-120810795(-) m6A CDS       24981863//27773535//22575960 chr10:120816285-120816286(-) m6A CDS       24981863//27773535//27371828//22575960 chr10:120816299-120816300(-) m6A CDS       24981863//27773535//27371828//22575960 chr10:120816390-120816391(-) m6A exon//intron       24981863//28052920//27773535//27371828//22575960//22608085 chr10:120816426-120816427(-) m6A exon//intron       24981863//28052920//27773535//27371828//22575960//22608085 chr10:120816449-120816450(-) Am CDS//exon       - chr10:120816480-120816481(-) m6A CDS//exon       24981863//27773535//27371828//22575960//22608085 chr10:120816504-120816505(-) m6A CDS//exon       24981863//27773535//27371828//22575960//22608085 chr10:120816513-120816514(-) m6A CDS//exon       24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr10:120817503-120817504(-) m6A CDS//exon       24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr10:120817508-120817509(-) m6A CDS//exon       24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr10:120817541-120817542(-) m6A CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085 chr10:120817557-120817558(-) m6A CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085 chr10:120817563-120817564(-) m6A CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085 chr10:120817636-120817637(-) Am CDS//exon       - chr10:120817644-120817645(-) m6A CDS//exon       24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr10:120817659-120817660(-) m6A CDS//exon       24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr10:120817724-120817725(-) m6A CDS//exon       24981863//28052920//27773535//22575960 chr10:120817800-120817801(-) m6A CDS//exon       24981863//27773535//22575960 chr10:120818738-120818739(-) m6A CDS//exon       24981863//27773535 chr10:120819091-120819092(-) m6A exon//intron       - chr10:120819167-120819168(-) Y CDS//exon       25219674 chr10:120819268-120819269(-) m6A exon//intron       27773535 chr10:120829103-120829104(-) m6A CDS       26404942 chr10:120829112-120829113(-) m6A CDS       26404942 chr10:120830425-120830426(-) m6A CDS       26404942 chr10:120830439-120830440(-) m6A CDS       26404942 chr10:120830444-120830445(-) m6A CDS       26404942 chr10:120830550-120830551(-) m6A CDS       26404942 chr10:120832492-120832493(-) Y CDS       25219674//26075521 chr10:120832962-120832963(-) m6A CDS       26404942 chr10:120833028-120833029(-) m6A CDS       26404942 chr10:120833084-120833085(-) m6A CDS       26404942//22575960 chr10:120833271-120833272(-) m6A CDS       26404942//22575960 chr10:120840275-120840276(-) m6A 5'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EIF3A	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-1-5p
Interactor2: EIF3A

Evidence Support:

Strong-Evidence	RISC-IP
Support Database	ViRBase

References:

PMID	20585629	Target region	5'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	HEK293 cells	Interactor2 expression	None
Description	Here, we identify cellular transcript targets of one of the most highly expressed HCMV encoded miRNAs, miR-US25-1, using a recently developed biochemical approach called RISC immunoprecipitation. Strikingly, the majority of identified transcripts contained miR-US25-1 target sites within the 5'UTR rather than the 3'UTR.