Basic Information:

  VIRBase ID:  

VHID00504635

  Virus:  

Human herpesvirus 5 strain AD169

  Host:  

Homo sapiens

  Confidence Score:  

0.7311

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-1-5p:  MIMAT0001581          OGDH:  NM_002541     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-1-5p	OGDH
miRBase Accession/Entrez ID	MIMAT0001581	4967
Organism	Human herpesvirus 5 strain AD169	Homo sapiens
Category	miRNA	mRNA
Alias	-	AKGDH//E1k//KGD1//OGDC//OGDH2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	OGDH	chr7:44664904(+) A-I      intronic chr7:44664853(+) A-I      intronic chr7:44661290(+) A-I      intronic chr7:44661289(+) A-I      intronic chr7:44661285(+) A-I      intronic chr7:44661270(+) A-I      intronic chr7:44661240(+) A-I      intronic chr7:44654720(+) A-I      intronic chr7:44654559(+) A-I      intronic chr7:44654547(+) A-I      intronic chr7:44654530(+) A-I      intronic chr7:44652758(+) A-I      intronic chr7:44652749(+) A-I      intronic chr7:44652737(+) A-I      intronic chr7:44648248(+) A-I      intronic chr7:44648240(+) A-I      intronic chr7:44648159(+) A-I      intronic chr7:44648112(+) A-I      intronic chr7:44648111(+) A-I      intronic chr7:44647967(+) A-I      intronic chr7:44647841(+) A-I      intronic chr7:44647839(+) A-I      intronic chr7:44647796(+) A-I      intronic chr7:44680592(+) A-I      intronic chr7:44680632(+) A-I      intronic chr7:44680638(+) A-I      intronic chr7:44698538(+) A-I      intronic chr7:44698552(+) A-I      intronic chr7:44698560(+) A-I      intronic chr7:44698578(+) A-I      intronic chr7:44700416(+) A-I      intronic chr7:44700442(+) A-I      intronic chr7:44706586(+) A-I      intronic chr7:44706602(+) A-I      intronic chr7:44706608(+) A-I      intronic chr7:44706610(+) A-I      intronic chr7:44706620(+) A-I      intronic chr7:44734824(+) A-I      intronic chr7:44743120(+) A-I      intronic chr7:44743123(+) A-I      intronic chr7:44743161(+) A-I      intronic chr7:44743163(+) A-I      intronic chr7:44743169(+) A-I      intronic chr7:44745622(+) A-I      intronic chr7:44745683(+) A-I      intronic chr7:44745692(+) A-I      intronic chr7:44683684(+) A-I      intronic chr7:44683697(+) A-I      intronic chr7:44691261(+) A-I      intronic chr7:44691279(+) A-I      intronic chr7:44691290(+) A-I      intronic chr7:44691300(+) A-I      intronic chr7:44692779(+) A-I      intronic chr7:44692792(+) A-I      intronic chr7:44700341(+) A-I      intronic chr7:44703191(+) A-I      intronic chr7:44703192(+) A-I      intronic chr7:44703210(+) A-I      intronic chr7:44703226(+) A-I      intronic chr7:44703293(+) A-I      intronic chr7:44665429(+) A-I      intronic chr7:44703454(+) A-I      intronic chr7:44706658(+) A-I      intronic chr7:44706664(+) A-I      intronic chr7:44707807(+) A-I      intronic chr7:44708863(+) A-I      intronic chr7:44708960(+) A-I      intronic chr7:44710376(+) A-I      intronic chr7:44710483(+) A-I      intronic chr7:44710489(+) A-I      intronic chr7:44711466(+) A-I      intronic chr7:44711481(+) A-I      intronic chr7:44712278(+) A-I      intronic chr7:44712378(+) A-I      intronic chr7:44712425(+) A-I      intronic chr7:44712444(+) A-I      intronic chr7:44712492(+) A-I      intronic chr7:44712763(+) A-I      intronic chr7:44712783(+) A-I      intronic chr7:44712843(+) A-I      intronic chr7:44721813(+) A-I      intronic chr7:44722082(+) A-I      intronic chr7:44722174(+) A-I      intronic chr7:44722407(+) A-I      intronic chr7:44722637(+) A-I      intronic chr7:44724463(+) A-I      intronic chr7:44724512(+) A-I      intronic chr7:44668137(+) A-I      intronic chr7:44724532(+) A-I      intronic chr7:44724552(+) A-I      intronic chr7:44724570(+) A-I      intronic chr7:44727033(+) A-I      intronic chr7:44727037(+) A-I      intronic chr7:44727187(+) A-I      intronic chr7:44650413(+) A-I      intronic chr7:44727274(+) A-I      intronic chr7:44709014(+) A-I      intronic chr7:44743433(+) A-I      intronic chr7:44744532(+) A-I      intronic chr7:44727768(+) A-I      intronic chr7:44727789(+) A-I      intronic chr7:44727792(+) A-I      intronic chr7:44727805(+) A-I      intronic chr7:44727808(+) A-I      intronic chr7:44727823(+) A-I      intronic chr7:44728074(+) A-I      intronic chr7:44728080(+) A-I      intronic chr7:44728085(+) A-I      intronic chr7:44728110(+) A-I      intronic chr7:44728123(+) A-I      intronic chr7:44728191(+) A-I      intronic chr7:44728195(+) A-I      intronic chr7:44728196(+) A-I      intronic chr7:44728205(+) A-I      intronic chr7:44728211(+) A-I      intronic chr7:44728214(+) A-I      intronic chr7:44728237(+) A-I      intronic chr7:44728908(+) A-I      intronic chr7:44729038(+) A-I      intronic chr7:44729072(+) A-I      intronic chr7:44730940(+) A-I      intronic chr7:44731086(+) A-I      intronic chr7:44683578(+) A-I      intronic chr7:44732483(+) A-I      intronic chr7:44732690(+) A-I      intronic chr7:44734716(+) A-I      intronic chr7:44734759(+) A-I      intronic chr7:44735097(+) A-I      intronic chr7:44735181(+) A-I      intronic chr7:44741368(+) A-I      intronic chr7:44741378(+) A-I      intronic chr7:44741387(+) A-I      intronic chr7:44741495(+) A-I      intronic chr7:44741590(+) A-I      intronic chr7:44741591(+) A-I      intronic chr7:44741615(+) A-I      intronic chr7:44742304(+) A-I      intronic chr7:44742377(+) A-I      intronic chr7:44742442(+) A-I      intronic chr7:44742964(+) A-I      intronic chr7:44743064(+) A-I      intronic chr7:44743086(+) A-I      intronic chr7:44743090(+) A-I      intronic chr7:44743113(+) A-I      intronic chr7:44743133(+) A-I      intronic chr7:44743199(+) A-I      intronic chr7:44743225(+) A-I      intronic chr7:44744009(+) A-I      intronic chr7:44744079(+) A-I      intronic chr7:44744379(+) A-I      intronic chr7:44744410(+) A-I      intronic chr7:44744427(+) A-I      intronic chr7:44744435(+) A-I      intronic chr7:44744484(+) A-I      intronic chr7:44744490(+) A-I      intronic chr7:44744499(+) A-I      intronic chr7:44745600(+) A-I      intronic chr7:44745635(+) A-I      intronic chr7:44745640(+) A-I      intronic chr7:44745654(+) A-I      intronic chr7:44745667(+) A-I      intronic chr7:44745736(+) A-I      intronic chr7:44735195(+) A-I      intronic chr7:44724513(+) A-I      intronic chr7:44665451(+) A-I      intronic chr7:44665491(+) A-I      intronic chr7:44666659(+) A-I      intronic chr7:44666660(+) A-I      intronic chr7:44666665(+) A-I      intronic chr7:44666776(+) A-I      intronic chr7:44667316(+) A-I      intronic chr7:44668284(+) A-I      intronic chr7:44668296(+) A-I      intronic chr7:44672031(+) A-I      intronic chr7:44672698(+) A-I      intronic chr7:44672758(+) A-I      intronic chr7:44680549(+) A-I      intronic chr7:44680610(+) A-I      intronic chr7:44680702(+) A-I      intronic chr7:44681790(+) A-I      intronic chr7:44681916(+) A-I      intronic chr7:44681919(+) A-I      intronic chr7:44681938(+) A-I      intronic chr7:44681951(+) A-I      intronic chr7:44682289(+) A-I      intronic chr7:44682290(+) A-I      intronic chr7:44682305(+) A-I      intronic chr7:44682650(+) A-I      intronic chr7:44683597(+) A-I      intronic chr7:44683627(+) A-I      intronic chr7:44683629(+) A-I      intronic chr7:44683683(+) A-I      intronic chr7:44707791(+) A-I      intronic chr7:44743132(+) A-I      intronic chr7:44698597(+) A-I      intronic chr7:44680654(+) A-I      intronic chr7:44742918(+) A-I      intronic chr7:44722587(+) A-I      intronic chr7:44691918(+) A-I      intronic chr7:44742941(+) A-I      intronic chr7:44647896(+) A-I      intronic chr7:44677289(+) A-I      intronic chr7:44727257(+) A-I      intronic chr7:44698454(+) A-I      intronic chr7:44746332(+) A-I      intronic chr7:44729112(+) A-I      intronic chr7:44724469(+) A-I      intronic chr7:44703480(+) A-I      intronic chr7:44745709(+) A-I      intronic chr7:44700490(+) A-I      intronic chr7:44742256(+) A-I      intronic chr7:44742757(+) A-I      intronic chr7:44712346(+) A-I      intronic chr7:44743396(+) A-I      intronic chr7:44703007(+) A-I      intronic chr7:44703472(+) A-I      intronic chr7:44682777(+) A-I      intronic chr7:44722961(+) A-I      intronic chr7:44724526(+) A-I      intronic chr7:44730895(+) A-I      intronic chr7:44703299(+) A-I      intronic chr7:44742854(+) A-I      intronic chr7:44732710(+) A-I      intronic chr7:44654638(+) A-I      intronic chr7:44729118(+) A-I      intronic chr7:44712805(+) A-I      intronic chr7:44672236(+) A-I      intronic chr7:44664751(+) A-I      intronic chr7:44710452(+) A-I      intronic chr7:44738281(+) A-I      intronic chr7:44703459(+) A-I      intronic chr7:44699774(+) A-I      intronic chr7:44710463(+) A-I      intronic chr7:44735051(+) A-I      intronic chr7:44683551(+) A-I      intronic chr7:44647401(+) A-I      intronic chr7:44741550(+) A-I      intronic chr7:44672273(+) A-I      intronic chr7:44731051(+) A-I      intronic chr7:44732516(+) A-I      intronic chr7:44648962(+) A-I      intronic chr7:44732484(+) A-I      intronic chr7:44735095(+) A-I      intronic chr7:44732724(+) A-I      intronic chr7:44700429(+) A-I      intronic chr7:44661377(+) A-I      intronic chr7:44666713(+) A-I      intronic chr7:44698528(+) A-I      intronic chr7:44703418(+) A-I      intronic chr7:44652013(+) A-I      intronic chr7:44732706(+) A-I      intronic chr7:44703247(+) A-I      intronic chr7:44682002(+) A-I      intronic chr7:44708948(+) A-I      intronic chr7:44712933(+) A-I      intronic chr7:44745249(+) A-I      intronic chr7:44740602(+) A-I      intronic chr7:44732705(+) A-I      intronic chr7:44743057(+) A-I      intronic chr7:44732720(+) A-I      intronic chr7:44745562(+) A-I      intronic chr7:44712261(+) A-I      intronic chr7:44722627(+) A-I      intronic chr7:44732489(+) A-I      intronic chr7:44700412(+) A-I      intronic chr7:44682658(+) A-I      intronic chr7:44732653(+) A-I      intronic chr7:44728404(+) A-I      intronic chr7:44649654(+) A-I      intronic chr7:44745684(+) A-I      intronic chr7:44672041(+) A-I      intronic chr7:44706595(+) A-I      intronic chr7:44732513(+) A-I      intronic chr7:44732455(+) A-I      intronic chr7:44727882(+) A-I      intronic chr7:44732507(+) A-I      intronic chr7:44668260(+) A-I      intronic chr7:44731000(+) A-I      intronic chr7:44667308(+) A-I      intronic chr7:44701441(+) A-I      intronic chr7:44742928(+) A-I      intronic chr7:44732704(+) A-I      intronic chr7:44656793(+) A-I      intronic chr7:44732652(+) A-I      intronic chr7:44732509(+) A-I      intronic chr7:44647724(+) A-I      intronic chr7:44726897(+) A-I      intronic chr7:44724637(+) A-I      intronic chr7:44648827(+) A-I      intronic chr7:44740508(+) A-I      intronic chr7:44682803(+) A-I      intronic chr7:44706683(+) A-I      intronic chr7:44656806(+) A-I      intronic chr7:44712871(+) A-I      intronic chr7:44677298(+) A-I      intronic chr7:44727127(+) A-I      intronic chr7:44742831(+) A-I      intronic chr7:44743405(+) A-I      intronic chr7:44708815(+) A-I      intronic chr7:44743063(+) A-I      intronic chr7:44734764(+) A-I      intronic chr7:44700476(+) A-I      intronic chr7:44681813(+) A-I      intronic chr7:44648850(+) A-I      intronic chr7:44664854(+) A-I      intronic chr7:44744495(+) A-I      intronic chr7:44742402(+) A-I      intronic chr7:44656631(+) A-I      intronic chr7:44743364(+) A-I      intronic chr7:44722358(+) A-I      intronic chr7:44666641(+) A-I      intronic chr7:44698535(+) A-I      intronic chr7:44734969(+) A-I      intronic chr7:44706740(+) A-I      intronic chr7:44738254(+) A-I      intronic chr7:44742975(+) A-I      intronic chr7:44692189(+) A-I      intronic chr7:44745207(+) A-I      intronic chr7:44680622(+) A-I      intronic chr7:44745171(+) A-I      intronic chr7:44682267(+) A-I      intronic chr7:44730890(+) A-I      intronic chr7:44653010(+) A-I      intronic chr7:44683780(+) A-I      intronic chr7:44729090(+) A-I      intronic chr7:44743143(+) A-I      intronic chr7:44722234(+) A-I      intronic chr7:44672705(+) A-I      intronic chr7:44703158(+) A-I      intronic chr7:44698671(+) A-I      intronic chr7:44672383(+) A-I      intronic chr7:44741500(+) A-I      intronic chr7:44735252(+) A-I      intronic chr7:44742786(+) A-I      intronic chr7:44648988(+) A-I      intronic chr7:44728372(+) A-I      intronic chr7:44661350(+) A-I      intronic chr7:44661217(+) A-I      intronic chr7:44745276(+) A-I      intronic chr7:44735237(+) A-I      intronic chr7:44728303(+) A-I      intronic chr7:44708030(+) A-I      intronic chr7:44672019(+) A-I      intronic chr7:44742839(+) A-I      intronic chr7:44742916(+) A-I      intronic chr7:44707946(+) A-I      intronic chr7:44722337(+) A-I      intronic chr7:44731388(+) A-I      intronic chr7:44734821(+) A-I      intronic chr7:44699748(+) A-I      intronic chr7:44681973(+) A-I      intronic chr7:44661392(+) A-I      intronic chr7:44664863(+) A-I      intronic chr7:44723095(+) A-I      intronic chr7:44746289(+) A-I      intronic chr7:44652736(+) A-I      intronic chr7:44664804(+) A-I      intronic chr7:44746491(+) A-I      intronic chr7:44734781(+) A-I      intronic chr7:44649002(+) A-I      intronic chr7:44665501(+) A-I      intronic chr7:44700452(+) A-I      intronic chr7:44648296(+) A-I      intronic chr7:44661218(+) A-I      intronic chr7:44709013(+) A-I      intronic chr7:44727207(+) A-I      intronic chr7:44681962(+) A-I      intronic chr7:44660812(+) A-I      intronic chr7:44682661(+) A-I      intronic chr7:44745725(+) A-I      intronic chr7:44677234(+) A-I      intronic chr7:44672695(+) A-I      intronic chr7:44648241(+) A-I      intronic chr7:44729073(+) A-I      intronic chr7:44724482(+) A-I      intronic chr7:44655474(+) A-I      intronic chr7:44743135(+) A-I      intronic chr7:44734978(+) A-I      intronic chr7:44681912(+) A-I      intronic chr7:44713816(+) A-I      intronic chr7:44734843(+) A-I      intronic chr7:44744368(+) A-I      intronic chr7:44661425(+) A-I      intronic chr7:44699798(+) A-I      intronic chr7:44721890(+) A-I      intronic chr7:44671919(+) A-I      intronic chr7:44672384(+) A-I      intronic chr7:44664749(+) A-I      intronic chr7:44730908(+) A-I      intronic chr7:44728932(+) A-I      intronic chr7:44722969(+) A-I      intronic chr7:44698616(+) A-I      intronic chr7:44700270(+) A-I      intronic chr7:44681760(+) A-I      intronic chr7:44706647(+) A-I      intronic chr7:44698564(+) A-I      intronic chr7:44706689(+) A-I      intronic chr7:44698499(+) A-I      intronic chr7:44735143(+) A-I      intronic chr7:44742805(+) A-I      intronic chr7:44698656(+) A-I      intronic chr7:44648949(+) A-I      intronic chr7:44648989(+) A-I      intronic chr7:44744476(+) A-I      intronic chr7:44727715(+) A-I      intronic chr7:44722313(+) A-I      intronic chr7:44727827(+) A-I      intronic chr7:44732886(+) A-I      intronic chr7:44680640(+) A-I      intronic chr7:44741576(+) A-I      intronic chr7:44681876(+) A-I      intronic chr7:44703216(+) A-I      intronic chr7:44671931(+) A-I      intronic chr7:44741658(+) A-I      intronic chr7:44723052(+) A-I      intronic chr7:44731024(+) A-I      intronic chr7:44681972(+) A-I      intronic chr7:44706770(+) A-I      intronic chr7:44745267(+) A-I      intronic chr7:44745708(+) A-I      intronic chr7:44742868(+) A-I      intronic chr7:44743390(+) A-I      intronic chr7:44735150(+) A-I      intronic chr7:44731094(+) A-I      intronic chr7:44743377(+) A-I      intronic chr7:44707916(+) A-I      intronic chr7:44741595(+) A-I      intronic chr7:44734957(+) A-I      intronic chr7:44735151(+) A-I      intronic chr7:44712368(+) A-I      intronic chr7:44728889(+) A-I      intronic chr7:44721934(+) A-I      intronic chr7:44712859(+) A-I      intronic chr7:44703352(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	OGDH	chr7:44732484(+) A-I intron -    22028664 chr7:44732489(+) A-I intron -    22028664 chr7:44732507(+) A-I intron -    22028664 chr7:44732509(+) A-I intron -    22028664 chr7:44732513(+) A-I intron -    22028664 chr7:44732516(+) A-I intron -    22028664 chr7:44732525(+) A-I intron -    22028664 chr7:44732652(+) A-I intron -    22028664 chr7:44732653(+) A-I intron -    22028664 chr7:44732658(+) A-I intron -    22028664 chr7:44732704(+) A-I intron -    22028664 chr7:44732705(+) A-I intron -    22028664 chr7:44732706(+) A-I intron -    22028664 chr7:44732710(+) A-I intron -    22028664 chr7:44732720(+) A-I intron -    22028664 chr7:44732724(+) A-I intron -    22028664 chr7:44647401(+) A-G intron -    22484847 chr7:44647886(+) A-G intron -    22484847 chr7:44648151(+) A-G intron -    22484847 chr7:44652013(+) A-G intron -    22484847 chr7:44656631(+) A-G intron -    22484847 chr7:44660873(+) A-G intron -    22484847 chr7:44661217(+) A-G intron -    22484847 chr7:44661218(+) A-G intron -    22484847 chr7:44661350(+) A-G intron -    22484847 chr7:44661377(+) A-G intron -    22484847 chr7:44661392(+) A-G intron -    22484847 chr7:44664749(+) A-G intron -    22484847 chr7:44664751(+) A-G intron -    22484847 chr7:44665511(+) A-G intron -    22484847 chr7:44666641(+) A-G intron -    22484847 chr7:44666713(+) A-G intron -    22484847 chr7:44667308(+) A-G intron -    22484847 chr7:44669267(+) T-C intron -    22484847 chr7:44672075(+) A-G intron -    22484847 chr7:44672383(+) A-G intron -    22484847 chr7:44672384(+) A-G intron -    22484847 chr7:44680640(+) A-G intron -    22484847 chr7:44680707(+) A-G intron -    22484847 chr7:44681813(+) A-G intron -    22484847 chr7:44691918(+) A-G intron -    22484847 chr7:44692189(+) A-G intron -    22484847 chr7:44693285(+) A-C intron -    22484847 chr7:44698454(+) A-G intron -    22484847 chr7:44698499(+) A-G intron -    22484847 chr7:44698535(+) A-G intron -    22484847 chr7:44698597(+) A-G intron -    22484847 chr7:44698656(+) A-G intron -    22484847 chr7:44698671(+) A-G intron -    22484847 chr7:44699849(+) A-G intron -    22484847 chr7:44700385(+) A-G intron -    22484847 chr7:44700406(+) A-G intron -    22484847 chr7:44700412(+) A-G intron -    22484847 chr7:44700420(+) A-G intron -    22484847 chr7:44700428(+) A-G intron -    22484847 chr7:44700429(+) A-G intron -    22484847 chr7:44700476(+) A-G intron -    22484847 chr7:44700490(+) A-G intron -    22484847 chr7:44703068(+) T-C intron -    22484847 chr7:44703200(+) G-T intron -    22484847 chr7:44706574(+) A-G intron -    22484847 chr7:44706595(+) A-G intron -    22484847 chr7:44707782(+) A-G intron -    22484847 chr7:44708030(+) A-G intron -    22484847 chr7:44710463(+) A-G intron -    22484847 chr7:44712261(+) A-G intron -    22484847 chr7:44712346(+) A-G intron -    22484847 chr7:44722337(+) A-G intron -    22484847 chr7:44722358(+) A-G intron -    22484847 chr7:44722898(+) A-G intron -    22484847 chr7:44722929(+) A-G intron -    22484847 chr7:44722945(+) A-G intron -    22484847 chr7:44722957(+) A-G intron -    22484847 chr7:44722961(+) A-G intron -    22484847 chr7:44723065(+) A-G intron -    22484847 chr7:44724468(+) A-G intron -    22484847 chr7:44724469(+) A-G intron -    22484847 chr7:44724482(+) A-G intron -    22484847 chr7:44724526(+) A-G intron -    22484847 chr7:44724589(+) A-G intron -    22484847 chr7:44724637(+) A-G intron -    22484847 chr7:44726288(+) C-T intron -    22484847 chr7:44726897(+) A-G intron -    22484847 chr7:44727127(+) A-G intron -    22484847 chr7:44727708(+) A-G intron -    22484847 chr7:44728236(+) A-G intron -    22484847 chr7:44729073(+) A-G intron -    22484847 chr7:44729090(+) A-G intron -    22484847 chr7:44730890(+) A-G intron -    22484847 chr7:44730895(+) A-G intron -    22484847 chr7:44734756(+) A-G intron -    22484847 chr7:44734764(+) A-G intron -    22484847 chr7:44734781(+) A-G intron -    22484847 chr7:44735095(+) A-G intron -    22484847 chr7:44735171(+) A-G intron -    22484847 chr7:44735252(+) A-G intron -    22484847 chr7:44741595(+) A-G intron -    22484847 chr7:44742757(+) A-G intron -    22484847 chr7:44742829(+) A-G intron -    22484847 chr7:44742831(+) A-G intron -    22484847 chr7:44743148(+) A-G intron -    22484847 chr7:44743192(+) A-G intron -    22484847 chr7:44743268(+) A-G intron -    22484847 chr7:44743377(+) A-G intron -    22484847 chr7:44744349(+) A-G intron -    22484847 chr7:44745276(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	OGDH	chr7:44646248-44646249(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr7:44662419-44662420(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr7:44663928-44663929(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr7:44663936-44663937(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr7:44663957-44663958(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr7:44663996-44663997(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr7:44664005-44664006(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr7:44664018-44664019(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr7:44664038-44664039(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr7:44664098-44664099(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr7:44664108-44664109(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr7:44664144-44664145(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr7:44684932-44684933(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr7:44685064-44685065(+) m6A CDS//intron       24284625//22575960 chr7:44685079-44685080(+) m6A CDS//intron       24284625//22575960 chr7:44687065-44687066(+) m6A CDS//intron       24284625 chr7:44687283-44687284(+) m6A CDS//intron       24284625 chr7:44687313-44687314(+) m6A CDS//intron       24284625 chr7:44687349-44687350(+) m6A CDS//intron       24284625 chr7:44713469-44713470(+) m6A CDS//exon//intron       22575960 chr7:44713508-44713509(+) m6A CDS//exon//intron       22575960 chr7:44714094-44714095(+) m6A CDS//exon       22575960 chr7:44714128-44714129(+) m6A CDS//exon       22575960 chr7:44714821-44714822(+) m6A CDS//exon       - chr7:44715635-44715636(+) m6A CDS       22575960 chr7:44715703-44715704(+) m6A CDS       22575960 chr7:44715714-44715715(+) m6A CDS       22575960 chr7:44721378-44721379(+) m6A CDS       24284625 chr7:44721444-44721445(+) Cm CDS       - chr7:44733514-44733515(+) m6A CDS       22575960 chr7:44736138-44736139(+) m6A CDS       - chr7:44736532-44736533(+) m6A CDS       - chr7:44736554-44736555(+) m6A CDS       - chr7:44736559-44736560(+) m6A CDS       - chr7:44736566-44736567(+) m6A CDS       - chr7:44737003-44737004(+) m6A CDS       - chr7:44737011-44737012(+) m6A CDS       - chr7:44737027-44737028(+) m6A CDS       - chr7:44747299-44747300(+) m6A CDS       - chr7:44747306-44747307(+) m6A CDS       - chr7:44747491-44747492(+) m6A CDS       - chr7:44747526-44747527(+) m6A CDS       24284625 chr7:44747557-44747558(+) m6A 3'UTR//CDS       24284625 chr7:44747587-44747588(+) m6A 3'UTR//CDS       24284625//24981863//22575960 chr7:44748107-44748108(+) m6A 3'UTR       24284625//25456834 chr7:44748385-44748386(+) m6A 3'UTR       24284625//24981863 chr7:44748435-44748436(+) m6A 3'UTR       24284625//24981863 chr7:44748567-44748568(+) m6A 3'UTR       24284625 chr7:44748610-44748611(+) m6A 3'UTR       24284625 chr7:44748616-44748617(+) m6A 3'UTR       24284625 chr7:44748648-44748649(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	OGDH	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-1-5p
Interactor2: OGDH

Evidence Support:

Strong-Evidence	RISC-IP
Support Database	ViRBase

References:

PMID	20585629	Target region	5'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	HEK293 cells	Interactor2 expression	None
Description	Here, we identify cellular transcript targets of one of the most highly expressed HCMV encoded miRNAs, miR-US25-1, using a recently developed biochemical approach called RISC immunoprecipitation. Strikingly, the majority of identified transcripts contained miR-US25-1 target sites within the 5'UTR rather than the 3'UTR.