Detail Information

Basic Information:


  VIRBase ID:  

VHID00499518

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-3p:           TPCN1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-12-3p TPCN1
miRBase
Accession/Entrez ID
MIMAT0015238 53373
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - TPC1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TPCN1
chr12:113676708(+) A-I      intronic
chr12:113667559(+) A-I      intronic
chr12:113667349(+) A-I      intronic
chr12:113707849(+) A-I      intronic
chr12:113721591(+) A-I      intronic
chr12:113721239(+) A-I      intronic
chr12:113720359(+) A-I      intronic
chr12:113720354(+) A-I      intronic
chr12:113720316(+) A-I      intronic
chr12:113721558(+) A-I      intronic
chr12:113721605(+) A-I      intronic
chr12:113676702(+) A-I      intronic
chr12:113720298(+) A-I      intronic
chr12:113720291(+) A-I      intronic
chr12:113676689(+) A-I      intronic
chr12:113720160(+) A-I      intronic
chr12:113720715(+) A-I      intronic
chr12:113707854(+) A-I      intronic
chr12:113720299(+) A-I      intronic
chr12:113707843(+) A-I      intronic
chr12:113707805(+) A-I      intronic
chr12:113702337(+) A-I      intronic
chr12:113721241(+) A-I      intronic
chr12:113721426(+) A-I      intronic
chr12:113703402(+) A-I      intronic
chr12:113702391(+) A-I      intronic
chr12:113702405(+) A-I      intronic
chr12:113719618(+) A-I      intronic
chr12:113676859(+) A-I      intronic
chr12:113720560(+) A-I      intronic
chr12:113688526(+) A-I      intronic
chr12:113702409(+) A-I      intronic
chr12:113721205(+) A-I      intronic
chr12:113676848(+) A-I      intronic
chr12:113720713(+) A-I      intronic
chr12:113696404(+) A-I      intronic
chr12:113688753(+) A-I      intronic
chr12:113688879(+) A-I      intronic
chr12:113693362(+) A-I      intronic
chr12:113676818(+) A-I      intronic
chr12:113676812(+) A-I      intronic
chr12:113719927(+) A-I      intronic
chr12:113707836(+) A-I      intronic
chr12:113719790(+) A-I      intronic
chr12:113667411(+) A-I      intronic
chr12:113719883(+) A-I      intronic
chr12:113676665(+) A-I      intronic
chr12:113693405(+) A-I      intronic
chr12:113693411(+) A-I      intronic
chr12:113713160(+) A-I      intronic
chr12:113667419(+) A-I      intronic
chr12:113693833(+) A-I      intronic
chr12:113666178(+) A-I      intronic
chr12:113721559(+) A-I      intronic
chr12:113666372(+) A-I      intronic
chr12:113695132(+) A-I      intronic
chr12:113674429(+) A-I      intronic
chr12:113674408(+) A-I      intronic
chr12:113713507(+) A-I      intronic
chr12:113720345(+) A-I      intronic
chr12:113721184(+) A-I      intronic
chr12:113695145(+) A-I      intronic
chr12:113666165(+) A-I      intronic
chr12:113668535(+) A-I      intronic
chr12:113721211(+) A-I      intronic
chr12:113720013(+) A-I      intronic
chr12:113718878(+) A-I      intronic
chr12:113721644(+) A-I      intronic
chr12:113720411(+) A-I      intronic
chr12:113713517(+) A-I      intronic
chr12:113719088(+) A-I      intronic
chr12:113668458(+) A-I      intronic
chr12:113719473(+) A-I      intronic
chr12:113667494(+) A-I      intronic
chr12:113695176(+) A-I      intronic
chr12:113719830(+) A-I      intronic
chr12:113664114(+) A-I      intronic
chr12:113695185(+) A-I      intronic
chr12:113695189(+) A-I      intronic
chr12:113696132(+) A-I      intronic
chr12:113700144(+) A-I      intronic
chr12:113696527(+) A-I      intronic
chr12:113708363(+) A-I      intronic
chr12:113667435(+) A-I      intronic
chr12:113667420(+) A-I      intronic
chr12:113696150(+) A-I      intronic
chr12:113719510(+) A-I      intronic
chr12:113696151(+) A-I      intronic
chr12:113696203(+) A-I      intronic
chr12:113696210(+) A-I      intronic
chr12:113696856(+) A-I      intronic
chr12:113698742(+) A-I      intronic
chr12:113698783(+) A-I      intronic
chr12:113719045(+) A-I      intronic
chr12:113696861(+) A-I      intronic
chr12:113713519(+) A-I      intronic
chr12:113718987(+) A-I      intronic
chr12:113719787(+) A-I      intronic
chr12:113733176(+) A-I      intronic
chr12:113721420(+) A-I      intronic
chr12:113721201(+) A-I      intronic
chr12:113719001(+) A-I      intronic
chr12:113720658(+) A-I      intronic
chr12:113694377(+) A-I      intronic
chr12:113667398(+) A-I      intronic
chr12:113698788(+) A-I      intronic
chr12:113719553(+) A-I      intronic
chr12:113667397(+) A-I      intronic
chr12:113713234(+) A-I      intronic
chr12:113712133(+) A-I      intronic
chr12:113720784(+) A-I      intronic
chr12:113676681(+) A-I      intronic
chr12:113712146(+) A-I      intronic
chr12:113720396(+) A-I      intronic
chr12:113667394(+) A-I      intronic
chr12:113667393(+) A-I      intronic
chr12:113698822(+) A-I      intronic
chr12:113719097(+) A-I      intronic
chr12:113712138(+) A-I      intronic
chr12:113720681(+) A-I      intronic
chr12:113721230(+) A-I      intronic
chr12:113719855(+) A-I      intronic
chr12:113667374(+) A-I      intronic
chr12:113718874(+) A-I      intronic
chr12:113718963(+) A-I      intronic
chr12:113708483(+) A-I      intronic
chr12:113696062(+) A-I      intronic
chr12:113708466(+) A-I      intronic
chr12:113693569(+) A-I      intronic
chr12:113713433(+) A-I      intronic
chr12:113698852(+) A-I      intronic
chr12:113667358(+) A-I      intronic
chr12:113720791(+) A-I      intronic
chr12:113667357(+) A-I      intronic
chr12:113666309(+) A-I      intronic
chr12:113719496(+) A-I      intronic
chr12:113666261(+) A-I      intronic
chr12:113666257(+) A-I      intronic
chr12:113720434(+) A-I      intronic
chr12:113668470(+) A-I      intronic
chr12:113698882(+) A-I      intronic
chr12:113720141(+) A-I      intronic
chr12:113713142(+) A-I      intronic
chr12:113702705(+) A-I      intronic
chr12:113720313(+) A-I      intronic
chr12:113721596(+) A-I      intronic
chr12:113708386(+) A-I      intronic
chr12:113713143(+) A-I      intronic
chr12:113719054(+) A-I      intronic
chr12:113708469(+) A-I      intronic
chr12:113721583(+) A-I      intronic
chr12:113720399(+) A-I      intronic
chr12:113693603(+) A-I      intronic
chr12:113732122(+) A-I      intronic
chr12:113720636(+) A-I      intronic
chr12:113721718(+) A-I      intronic
chr12:113666237(+) A-I      intronic
chr12:113698886(+) A-I      intronic
chr12:113719437(+) A-I      intronic
chr12:113720078(+) A-I      intronic
chr12:113719843(+) A-I      intronic
chr12:113720346(+) A-I      intronic
chr12:113719106(+) A-I      intronic
chr12:113700061(+) A-I      intronic
chr12:113712174(+) A-I      intronic
chr12:113701122(+) A-I      intronic
chr12:113707794(+) A-I      intronic
chr12:113720853(+) A-I      intronic
chr12:113721753(+) A-I      intronic
chr12:113720617(+) A-I      intronic
chr12:113694379(+) A-I      intronic
chr12:113720788(+) A-I      intronic
chr12:113708996(+) A-I      intronic
chr12:113720159(+) A-I      intronic
chr12:113721261(+) A-I      intronic
chr12:113708350(+) A-I      intronic
chr12:113708379(+) A-I      intronic
chr12:113698764(+) A-I      intronic
chr12:113721739(+) A-I      intronic
chr12:113721713(+) A-I      intronic
chr12:113707841(+) A-I      intronic
chr12:113721348(+) A-I      intronic
chr12:113721762(+) A-I      intronic
chr12:113693688(+) A-I      intronic
chr12:113719407(+) A-I      intronic
chr12:113668187(+) A-I      intronic
chr12:113721741(+) A-I      intronic
chr12:113702288(+) A-I      intronic
chr12:113708546(+) A-I      intronic
chr12:113702322(+) A-I      intronic
chr12:113667333(+) A-I      intronic
chr12:113667342(+) A-I      intronic
chr12:113696106(+) A-I      intronic
chr12:113696422(+) A-I      intronic
chr12:113719806(+) A-I      intronic
chr12:113707951(+) A-I      intronic
chr12:113720733(+) A-I      intronic
chr12:113683088(+) A-I      intronic
chr12:113720397(+) A-I      intronic
chr12:113668174(+) A-I      intronic
chr12:113666217(+) A-I      intronic
chr12:113721636(+) A-I      intronic
chr12:113720440(+) A-I      intronic
chr12:113676787(+) A-I      intronic
chr12:113721332(+) A-I      intronic
chr12:113720408(+) A-I      intronic
chr12:113720403(+) A-I      intronic
chr12:113719579(+) A-I      intronic
chr12:113720297(+) A-I      intronic
chr12:113668481(+) A-I      intronic
chr12:113720642(+) A-I      intronic
chr12:113720305(+) A-I      intronic
chr12:113688728(+) A-I      intronic
chr12:113719538(+) A-I      intronic
chr12:113720373(+) A-I      intronic
chr12:113721620(+) A-I      intronic
chr12:113694116(+) A-I      intronic
chr12:113720738(+) A-I      intronic
chr12:113721608(+) A-I      intronic
chr12:113698837(+) A-I      intronic
chr12:113698816(+) A-I      intronic
chr12:113719865(+) A-I      intronic
chr12:113696325(+) A-I      intronic
chr12:113720402(+) A-I      intronic
chr12:113719385(+) A-I      intronic
chr12:113696862(+) A-I      intronic
chr12:113666299(+) A-I      intronic
chr12:113696144(+) A-I      intronic
chr12:113721364(+) A-I      intronic
chr12:113708838(+) A-I      intronic
chr12:113720735(+) A-I      intronic
chr12:113667433(+) A-I      intronic
chr12:113667355(+) A-I      intronic
chr12:113696803(+) A-I      intronic
chr12:113707840(+) A-I      intronic
chr12:113720166(+) A-I      intronic
chr12:113733168(+) A-I      intronic
chr12:113719583(+) A-I      intronic
chr12:113721328(+) A-I      intronic
chr12:113719946(+) A-I      intronic
chr12:113688703(+) A-I      intronic
chr12:113676864(+) A-I      intronic
chr12:113707942(+) A-I      intronic
chr12:113694378(+) A-I      intronic
chr12:113720671(+) A-I      intronic
chr12:113721717(+) A-I      intronic
chr12:113720808(+) A-I      intronic
chr12:113696899(+) A-I      intronic
chr12:113713588(+) A-I      intronic
chr12:113721336(+) A-I      intronic
chr12:113720566(+) A-I      intronic
chr12:113720415(+) A-I      intronic
chr12:113696465(+) A-I      intronic
chr12:113688983(+) A-I      intronic
chr12:113694453(+) A-I      intronic
chr12:113721225(+) A-I      intronic
chr12:113721341(+) A-I      intronic
chr12:113688959(+) A-I      intronic
chr12:113712132(+) A-I      intronic
chr12:113666395(+) A-I      intronic
chr12:113719829(+) A-I      intronic
chr12:113721740(+) A-I      intronic
chr12:113720174(+) A-I      intronic
chr12:113719405(+) A-I      intronic
chr12:113721178(+) A-I      intronic
chr12:113696921(+) A-I      intronic
chr12:113718924(+) A-I      intronic
chr12:113666273(+) A-I      intronic
chr12:113666313(+) A-I      intronic
chr12:113667536(+) A-I      intronic
chr12:113702373(+) A-I      intronic
chr12:113666183(+) A-I      intronic
chr12:113676792(+) A-I      intronic
chr12:113708011(+) A-I      intronic
chr12:113721579(+) A-I      intronic
chr12:113696882(+) A-I      intronic
chr12:113721207(+) A-I      intronic
chr12:113698836(+) A-I      intronic
chr12:113720676(+) A-I      intronic
chr12:113720340(+) A-I      intronic
chr12:113720511(+) A-I      intronic
chr12:113718925(+) A-I      intronic
chr12:113720293(+) A-I      intronic
chr12:113707839(+) A-I      intronic
chr12:113721580(+) A-I      intronic
chr12:113720481(+) A-I      intronic
chr12:113696832(+) A-I      intronic
chr12:113721264(+) A-I      intronic
chr12:113666402(+) A-I      intronic
chr12:113719564(+) A-I      intronic
chr12:113720158(+) A-I      intronic
chr12:113718975(+) A-I      intronic
chr12:113718938(+) A-I      intronic
chr12:113720476(+) A-I      intronic
chr12:113720395(+) A-I      intronic
chr12:113720463(+) A-I      intronic
chr12:113720714(+) A-I      intronic
chr12:113712103(+) A-I      intronic
chr12:113720877(+) A-I      intronic
chr12:113700094(+) A-I      intronic
chr12:113720635(+) A-I      intronic
chr12:113712208(+) A-I      intronic
chr12:113707791(+) A-I      intronic
chr12:113688692(+) A-I      intronic
chr12:113712106(+) A-I      intronic
chr12:113719891(+) A-I      intronic
chr12:113683053(+) A-I      intronic
chr12:113708881(+) A-I      intronic
chr12:113732285(+) A-I      intronic
chr12:113721663(+) A-I      intronic
chr12:113681344(+) A-I      intronic
chr12:113682953(+) A-I      intronic
chr12:113696439(+) A-I      intronic
chr12:113718985(+) A-I      intronic
chr12:113719578(+) A-I      intronic
chr12:113720720(+) A-I      intronic
chr12:113699486(+) A-I      intronic
chr12:113733109(+) A-I      intronic
chr12:113696956(+) A-I      intronic
chr12:113708425(+) A-I      intronic
chr12:113720172(+) A-I      intronic
chr12:113708976(+) A-I      intronic
chr12:113719079(+) A-I      intronic
chr12:113696837(+) A-I      intronic
chr12:113696077(+) A-I      intronic
chr12:113719565(+) A-I      intronic
chr12:113732321(+) A-I      intronic
chr12:113719025(+) A-I      intronic
chr12:113721238(+) A-I      intronic
chr12:113720422(+) A-I      intronic
chr12:113718837(+) A-I      intronic
chr12:113707907(+) A-I      intronic
chr12:113666157(+) A-I      intronic
chr12:113698773(+) A-I      intronic
chr12:113720414(+) A-I      intronic
chr12:113666256(+) A-I      intronic
chr12:113719028(+) A-I      intronic
chr12:113699454(+) A-I      intronic
chr12:113720883(+) A-I      intronic
chr12:113676680(+) A-I      intronic
chr12:113667573(+) A-I      intronic
chr12:113720098(+) A-I      intronic
chr12:113720797(+) A-I      intronic
chr12:113667532(+) A-I      intronic
chr12:113666187(+) A-I      intronic
chr12:113693725(+) A-I      intronic
chr12:113720405(+) A-I      intronic
chr12:113720308(+) A-I      intronic
chr12:113666281(+) A-I      intronic
chr12:113721340(+) A-I      intronic
chr12:113719527(+) A-I      intronic
chr12:113720371(+) A-I      intronic
chr12:113720666(+) A-I      intronic
chr12:113688674(+) A-I      intronic
chr12:113696065(+) A-I      intronic
chr12:113667531(+) A-I      intronic
chr12:113707747(+) A-I      intronic
chr12:113713211(+) A-I      intronic
chr12:113707881(+) A-I      intronic
chr12:113720726(+) A-I      intronic
chr12:113720771(+) A-I      intronic
chr12:113719483(+) A-I      intronic
chr12:113667571(+) A-I      intronic
chr12:113682867(+) A-I      intronic
chr12:113702692(+) A-I      intronic
chr12:113696014(+) A-I      intronic
chr12:113719765(+) A-I      intronic
chr12:113719042(+) A-I      intronic
chr12:113675181(+) A-I      intronic
chr12:113696489(+) A-I      intronic
chr12:113708488(+) A-I      intronic
chr12:113688691(+) A-I      intronic
chr12:113708821(+) A-I      intronic
chr12:113707817(+) A-I      intronic
chr12:113721275(+) A-I      intronic
chr12:113721359(+) A-I      intronic
chr12:113697056(+) A-I      intronic
chr12:113718946(+) A-I      intronic
chr12:113719456(+) A-I      intronic
chr12:113696962(+) A-I      intronic
chr12:113718842(+) A-I      intronic
chr12:113719461(+) A-I      intronic
chr12:113719119(+) A-I      intronic
chr12:113721548(+) A-I      intronic
chr12:113732312(+) A-I      intronic
chr12:113721428(+) A-I      intronic
chr12:113719756(+) A-I      intronic
chr12:113709042(+) A-I      intronic
chr12:113720401(+) A-I      intronic
chr12:113707842(+) A-I      intronic
chr12:113718903(+) A-I      intronic
chr12:113698833(+) A-I      intronic
chr12:113712072(+) A-I      intronic
chr12:113697044(+) A-I      intronic
chr12:113708558(+) A-I      intronic
chr12:113721731(+) A-I      intronic
chr12:113719107(+) A-I      intronic
chr12:113699468(+) A-I      intronic
chr12:113720802(+) A-I      intronic
chr12:113707946(+) A-I      intronic
chr12:113719826(+) A-I      intronic
chr12:113721287(+) A-I      intronic
chr12:113721280(+) A-I      intronic
chr12:113721700(+) A-I      intronic
chr12:113719509(+) A-I      intronic
chr12:113721262(+) A-I      intronic
chr12:113713399(+) A-I      intronic
chr12:113723336(+) A-I      intronic
chr12:113698877(+) A-I      intronic
chr12:113666156(+) A-I      intronic
chr12:113666134(+) A-I      intronic
chr12:113720081(+) A-I      intronic
chr12:113698876(+) A-I      intronic
chr12:113707815(+) A-I      intronic
chr12:113666118(+) A-I      intronic
chr12:113720132(+) A-I      intronic
chr12:113718806(+) A-I      intronic
chr12:113718805(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TPCN1
chr12:113718805(+) A-I intron -    21960545   //22327324
chr12:113719079(+) A-I intron -    21960545   //22327324
chr12:113719097(+) A-I intron -    22327324
chr12:113720166(+) A-I intron -    22327324
chr12:113721740(+) A-I intron -    22327324
chr12:113721741(+) A-I intron -    22327324
chr12:113719456(+) A-I intron -    21960545
chr12:113666118(+) A-I intron -    21960545
chr12:113718837(+) A-I intron -    21960545
chr12:113718874(+) A-I intron -    21960545
chr12:113718946(+) A-I intron -    21960545
chr12:113718985(+) A-I intron -    21960545
chr12:113719025(+) A-I intron -    21960545
chr12:113719473(+) A-I intron -    21960545
chr12:113719483(+) A-I intron -    21960545
chr12:113719510(+) A-I intron -    21960545
chr12:113719553(+) A-I intron -    21960545
chr12:113719583(+) A-I intron -    21960545
chr12:113721718(+) A-I intron -    21960545
chr12:113666217(+) A-G intron -    22484847
chr12:113666299(+) A-G intron -    22484847
chr12:113666313(+) A-G intron -    22484847
chr12:113666372(+) A-G intron -    22484847
chr12:113667531(+) A-G intron -    22484847
chr12:113667532(+) A-G intron -    22484847
chr12:113667536(+) A-G intron -    22484847
chr12:113667571(+) A-G intron -    22484847
chr12:113696325(+) A-G intron -    22484847
chr12:113698816(+) A-G intron -    22484847
chr12:113698833(+) A-G intron -    22484847
chr12:113718874(+) A-G intron -    22484847
chr12:113719079(+) A-G intron -    22484847
chr12:113719097(+) A-G intron -    22484847
chr12:113719456(+) A-G intron -    22484847
chr12:113719473(+) A-G intron -    22484847
chr12:113719806(+) A-G intron -    22484847
chr12:113720158(+) A-G intron -    22484847
chr12:113720166(+) A-G intron -    22484847
chr12:113720313(+) A-G intron -    22484847
chr12:113720373(+) A-G intron -    22484847
chr12:113720396(+) A-G intron -    22484847
chr12:113720402(+) A-G intron -    22484847
chr12:113720440(+) A-G intron -    22484847
chr12:113720635(+) A-G intron -    22484847
chr12:113720788(+) A-G intron -    22484847
chr12:113720808(+) A-G intron -    22484847
chr12:113721275(+) A-G intron -    22484847
chr12:113721328(+) A-G intron -    22484847
chr12:113721336(+) A-G intron -    22484847
chr12:113721580(+) A-G intron -    22484847
chr12:113721608(+) A-G intron -    22484847
chr12:113721636(+) A-G intron -    22484847
chr12:113721644(+) A-G intron -    22484847
chr12:113721740(+) A-G intron -    22484847
chr12:113721741(+) A-G intron -    22484847
chr12:113718805(+) A-G intron -    22484847
chr12:113718837(+) A-G intron -    22484847
chr12:113661509(+) T-C intron -    22484847
chr12:113666134(+) A-G intron -    22484847
chr12:113666157(+) A-G intron -    22484847
chr12:113666178(+) A-G intron -    22484847
chr12:113666183(+) A-G intron -    22484847
chr12:113666273(+) A-G intron -    22484847
chr12:113666281(+) A-G intron -    22484847
chr12:113667333(+) A-G intron -    22484847
chr12:113667342(+) A-G intron -    22484847
chr12:113667355(+) A-G intron -    22484847
chr12:113667358(+) A-G intron -    22484847
chr12:113667394(+) A-G intron -    22484847
chr12:113667411(+) A-G intron -    22484847
chr12:113667419(+) A-G intron -    22484847
chr12:113667573(+) A-G intron -    22484847
chr12:113675181(+) A-G intron -    22484847
chr12:113676680(+) A-G intron -    22484847
chr12:113676681(+) A-G intron -    22484847
chr12:113693603(+) A-G intron -    22484847
chr12:113693688(+) A-G intron -    22484847
chr12:113694377(+) A-G intron -    22484847
chr12:113694378(+) A-G intron -    22484847
chr12:113694379(+) A-G intron -    22484847
chr12:113694453(+) A-G intron -    22484847
chr12:113696062(+) A-G intron -    22484847
chr12:113696065(+) A-G intron -    22484847
chr12:113696803(+) A-G intron -    22484847
chr12:113696832(+) A-G intron -    22484847
chr12:113696837(+) A-G intron -    22484847
chr12:113696861(+) A-G intron -    22484847
chr12:113696862(+) A-G intron -    22484847
chr12:113696899(+) A-G intron -    22484847
chr12:113696921(+) A-G intron -    22484847
chr12:113698764(+) A-G intron -    22484847
chr12:113698773(+) A-G intron -    22484847
chr12:113698876(+) A-G intron -    22484847
chr12:113698877(+) A-G intron -    22484847
chr12:113699454(+) A-G intron -    22484847
chr12:113699468(+) A-G intron -    22484847
chr12:113699486(+) A-G intron -    22484847
chr12:113700144(+) A-G intron -    22484847
chr12:113707815(+) A-G intron -    22484847
chr12:113707817(+) A-G intron -    22484847
chr12:113707836(+) A-G intron -    22484847
chr12:113707839(+) A-G intron -    22484847
chr12:113707840(+) A-G intron -    22484847
chr12:113707842(+) A-G intron -    22484847
chr12:113707881(+) A-G intron -    22484847
chr12:113707942(+) A-G intron -    22484847
chr12:113708319(+) C-T intron -    22484847
chr12:113708363(+) A-G intron -    22484847
chr12:113708488(+) A-G intron -    22484847
chr12:113712132(+) A-G intron -    22484847
chr12:113712133(+) A-G intron -    22484847
chr12:113712208(+) A-G intron -    22484847
chr12:113713211(+) A-G intron -    22484847
chr12:113713399(+) A-G intron -    22484847
chr12:113713588(+) A-G intron -    22484847
chr12:113718925(+) A-G intron -    22484847
chr12:113718946(+) A-G intron -    22484847
chr12:113718963(+) A-G intron -    22484847
chr12:113718975(+) A-G intron -    22484847
chr12:113718985(+) A-G intron -    22484847
chr12:113719025(+) A-G intron -    22484847
chr12:113719042(+) A-G intron -    22484847
chr12:113719107(+) A-G intron -    22484847
chr12:113719483(+) A-G intron -    22484847
chr12:113719509(+) A-G intron -    22484847
chr12:113719511(+) T-C intron -    22484847
chr12:113719564(+) A-G intron -    22484847
chr12:113719583(+) A-G intron -    22484847
chr12:113719765(+) A-G intron -    22484847
chr12:113719787(+) A-G intron -    22484847
chr12:113719790(+) A-G intron -    22484847
chr12:113719826(+) A-G intron -    22484847
chr12:113719829(+) A-G intron -    22484847
chr12:113719830(+) A-G intron -    22484847
chr12:113719837(+) T-C intron -    22484847
chr12:113719843(+) A-G intron -    22484847
chr12:113719865(+) A-G intron -    22484847
chr12:113719891(+) A-G intron -    22484847
chr12:113720132(+) A-G intron -    22484847
chr12:113720305(+) A-G intron -    22484847
chr12:113720308(+) A-G intron -    22484847
chr12:113720346(+) A-G intron -    22484847
chr12:113720395(+) A-G intron -    22484847
chr12:113720397(+) A-G intron -    22484847
chr12:113720401(+) A-G intron -    22484847
chr12:113720403(+) A-G intron -    22484847
chr12:113720405(+) A-G intron -    22484847
chr12:113720408(+) A-G intron -    22484847
chr12:113720415(+) A-G intron -    22484847
chr12:113720476(+) A-G intron -    22484847
chr12:113720481(+) A-G intron -    22484847
chr12:113720617(+) A-G intron -    22484847
chr12:113720636(+) A-G intron -    22484847
chr12:113720676(+) A-G intron -    22484847
chr12:113720713(+) A-G intron -    22484847
chr12:113720714(+) A-G intron -    22484847
chr12:113720720(+) A-G intron -    22484847
chr12:113720797(+) A-G intron -    22484847
chr12:113721238(+) A-G intron -    22484847
chr12:113721332(+) A-G intron -    22484847
chr12:113721340(+) A-G intron -    22484847
chr12:113721359(+) A-G intron -    22484847
chr12:113730351(+) T-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TPCN1
chr12:113687457-113687458(+) m6A intron       -
chr12:113687474-113687475(+) m6A intron       -
chr12:113687599-113687600(+) m6A intron       -
chr12:113687608-113687609(+) m6A intron       -
chr12:113687655-113687656(+) m6A intron       -
chr12:113714772-113714773(+) Y CDS//exon       25219674
chr12:113731109-113731110(+) m6A CDS//exon       -
chr12:113732026-113732027(+) m6A exon//intron       24284625//24981863
chr12:113733869-113733870(+) m6A CDS//exon       24284625//24981863
chr12:113733948-113733949(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr12:113734009-113734010(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr12:113734152-113734153(+) m6A 3'UTR       24284625//24981863
chr12:113734329-113734330(+) m6A 3'UTR       24284625//24209618//24981863//22575960
chr12:113734334-113734335(+) m6A 3'UTR       24284625//24209618//24981863//22575960
chr12:113734353-113734354(+) m6A 3'UTR       24284625//24209618//24981863//22575960
chr12:113734416-113734417(+) m6A 3'UTR       24284625//24209618//24981863//22575960
chr12:113734582-113734583(+) m6A 3'UTR       24284625//24981863
chr12:113734608-113734609(+) m6A 3'UTR       24284625//22608085
chr12:113734615-113734616(+) m6A 3'UTR       24284625//22608085
chr12:113734730-113734731(+) m6A 3'UTR       -
chr12:113734798-113734799(+) m6A 3'UTR       -
chr12:113736200-113736201(+) m6A 3'UTR       24284625
chr12:113736263-113736264(+) m6A 3'UTR       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate kshv-miR-K12-12-3p
Exosome Primary dendritic cells     21505438
TPCN1
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-12-3p
Interactor2: TPCN1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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