Basic Information:

  VIRBase ID:  

VHID00498127

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-3p:  MIMAT0015238          METTL1:  NM_023033     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-12-3p	METTL1
miRBase Accession/Entrez ID	MIMAT0015238	4234
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C12orf1//TRM8//TRMT8//YDL201w

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	METTL1	chr12:58162281-58162282(-) m6A 3'UTR       27773535 chr12:58162435-58162436(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr12:58162540-58162541(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:58162547-58162548(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:58162576-58162577(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr12:58162639-58162640(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:58162683-58162684(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:58162698-58162699(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:58162755-58162756(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:58162798-58162799(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:58162913-58162914(-) m6A 3'UTR//CDS       24209618//27773535//22575960 chr12:58162926-58162927(-) m6A 3'UTR//CDS       24209618//27773535//22575960 chr12:58163089-58163090(-) m6A 3'UTR//CDS       27773535 chr12:58163415-58163416(-) m6A 3'UTR//CDS       27773535 chr12:58163615-58163616(-) m6A 3'UTR//CDS//intron       27773535 chr12:58163660-58163661(-) m6A 3'UTR//CDS//intron       27773535 chr12:58163672-58163673(-) m6A 3'UTR//CDS//intron       27773535 chr12:58163714-58163715(-) m6A 3'UTR//CDS//intron       27773535 chr12:58163734-58163735(-) m6A 3'UTR//CDS//intron       27773535 chr12:58164550-58164551(-) m6A exon//intron       27773535 chr12:58165016-58165017(-) m6A 3'UTR//CDS//exon//intron       24981863//27371828 chr12:58165329-58165330(-) m6A 3'UTR//intron       24981863//27371828 chr12:58165380-58165381(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536 chr12:58165771-58165772(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536 chr12:58165853-58165854(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536 chr12:58165874-58165875(-) m6A 5'UTR//exon       24284625//25456834//24981863//27371828//27773536 chr12:58165881-58165882(-) m6A 5'UTR//exon       24284625//25456834//24981863//27371828//27773536 chr12:58165956-58165957(-) m6A 5'UTR       24981863 chr12:58166137-58166138(-) m6A 5'UTR       24981863 chr12:58166260-58166261(-) m6A 5'UTR       24981863 chr12:58166269-58166270(-) m6A 5'UTR       24981863 chr12:58166283-58166284(-) m6A 5'UTR       24981863 chr12:58166294-58166295(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-12-3p	Exosome Primary dendritic cells     21505438
	METTL1	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-12-3p
Interactor2: METTL1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg