Basic Information:

  VIRBase ID:  

VHID00498100

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-12-3p:  MIMAT0015238          MARCKS:  NM_002356     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-12-3p	MARCKS
miRBase Accession/Entrez ID	MIMAT0015238	4082
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	80K-L//MACS//PKCSL//PRKCSL

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MARCKS	chr6:114178639-114178640(+) m6A 5'UTR       24284625//24981863//27773535//22608085 chr6:114178913-114178914(+) m1A 5'UTR       26863196//26863410 chr6:114178942-114178943(+) m6A CDS       24284625//22575960 chr6:114179019-114179020(+) m6A CDS       24284625//27773536//22575960 chr6:114181203-114181204(+) m6A CDS       24284625//25456834//24981863//27773536//22575960//22608085 chr6:114181276-114181277(+) m6A CDS       24284625//25456834//24981863//26404942//27773536//22575960//22608085 chr6:114181518-114181519(+) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr6:114181785-114181786(+) m6A 3'UTR       24284625//25456834//24981863//26404942//27773535//22575960//22608085 chr6:114181838-114181839(+) m6A 3'UTR       24284625//25456834//24981863//26404942//27773535//22575960//22608085 chr6:114181997-114181998(+) m6A 3'UTR       24284625//24981863//27773535 chr6:114182094-114182095(+) m6A 3'UTR       24981863//27773535 chr6:114182115-114182116(+) m6A 3'UTR       24981863//27773535 chr6:114182354-114182355(+) m6A 3'UTR       24981863//27773535 chr6:114182412-114182413(+) m6A 3'UTR       24981863//27773535 chr6:114182421-114182422(+) m6A 3'UTR       24981863//27773535 chr6:114182469-114182470(+) m6A 3'UTR       24981863//27773535 chr6:114182575-114182576(+) m6A 3'UTR       24981863//27773535 chr6:114182638-114182639(+) m6A 3'UTR       24981863//27773535 chr6:114182654-114182655(+) m6A 3'UTR       24981863 chr6:114182664-114182665(+) m6A 3'UTR       24981863 chr6:114182677-114182678(+) m6A 3'UTR       - chr6:114182872-114182873(+) Gm 3'UTR       - chr6:114182911-114182912(+) m6A 3'UTR       27773535 chr6:114183020-114183021(+) m6A 3'UTR       27773535 chr6:114184324-114184325(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	kshv-miR-K12-12-3p	Exosome Primary dendritic cells     21505438
	MARCKS	Exosome Blood     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-12-3p
Interactor2: MARCKS

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg