Basic Information:

  VIRBase ID:  

VHID00497432

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:  MIMAT0015218          RD3:  NM_183059     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-5p	RD3
miRBase Accession/Entrez ID	MIMAT0015218	343035
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C1orf36//LCA12

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RD3	chr1:211652269-211652270(-) m6A 3'UTR//exon       25456834 chr1:211652296-211652297(-) m6A 3'UTR//exon       25456834 chr1:211652438-211652439(-) m6A CDS//exon       25456834 chr1:211652463-211652464(-) m6A CDS//exon       25456834 chr1:211652502-211652503(-) m6A CDS//exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RD3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-5p
Interactor2: RD3

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg