Basic Information:

  VIRBase ID:  

VHID00497402

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:  MIMAT0015218          MAMSTR:  NM_001297753     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-5p	MAMSTR
miRBase Accession/Entrez ID	MIMAT0015218	284358
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MASTR

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MAMSTR	chr19:49221741(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MAMSTR	chr19:49216114-49216115(-) m6A 3'UTR       25456834 chr19:49216249-49216250(-) m6A 3'UTR       24284625 chr19:49216276-49216277(-) m6A 3'UTR       24284625 chr19:49216410-49216411(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:49216424-49216425(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:49216452-49216453(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr19:49216494-49216495(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:49216501-49216502(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:49216545-49216546(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:49216650-49216651(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr19:49216659-49216660(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr19:49216668-49216669(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr19:49216692-49216693(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr19:49216743-49216744(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr19:49216782-49216783(-) m6A CDS       24284625//25456834//24981863//27773535 chr19:49218990-49218991(-) m6A 5'UTR//CDS       25456834 chr19:49219011-49219012(-) m6A 5'UTR//CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MAMSTR	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-5p
Interactor2: MAMSTR

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg