Detail Information

Basic Information:


  VIRBase ID:  

VHID00497330

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:           ADAMTS18:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-5-5p ADAMTS18
miRBase
Accession/Entrez ID		 MIMAT0015218 170692
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - ADAMTS21//KNO2//MMCAT

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ADAMTS18
chr16:77407143(-) A-I      intronic
chr16:77361028(-) A-I      intronic
chr16:77361025(-) A-I      intronic
chr16:77407121(-) A-I      intronic
chr16:77332580(-) A-I      intronic
chr16:77331959(-) A-I      intronic
chr16:77423031(-) A-I      intronic
chr16:77321539(-) A-I      intronic
chr16:77332577(-) A-I      intronic
chr16:77331907(-) A-I      intronic
chr16:77372274(-) A-I      intronic
chr16:77423126(-) A-I      intronic
chr16:77430832(-) A-I      intronic
chr16:77450415(-) A-I      intronic
chr16:77450390(-) A-I      intronic
chr16:77318201(-) A-I      intronic
chr16:77415475(-) A-I      intronic
chr16:77318191(-) A-I      intronic
chr16:77407167(-) A-I      intronic
chr16:77430796(-) A-I      intronic
chr16:77422112(-) A-I      intronic
chr16:77422089(-) A-I      intronic
chr16:77318196(-) A-I      intronic
chr16:77422069(-) A-I      intronic
chr16:77415642(-) A-I      intronic
chr16:77410823(-) A-I      intronic
chr16:77407182(-) A-I      intronic
chr16:77374177(-) A-I      intronic
chr16:77374157(-) A-I      intronic
chr16:77374145(-) A-I      intronic
chr16:77374139(-) A-I      intronic
chr16:77372676(-) A-I      intronic
chr16:77372664(-) A-I      intronic
chr16:77372607(-) A-I      intronic
chr16:77372338(-) A-I      intronic
chr16:77326752(-) A-I      intronic
chr16:77372313(-) A-I      intronic
chr16:77331919(-) A-I      intronic
chr16:77326157(-) A-I      intronic
chr16:77326150(-) A-I      intronic
chr16:77321582(-) A-I      intronic
chr16:77321533(-) A-I      intronic
chr16:77372019(-) A-I      intronic
chr16:77371898(-) A-I      intronic
chr16:77386749(-) A-I      intronic
chr16:77371906(-) A-I      intronic
chr16:77412058(-) A-I      intronic
chr16:77413566(-) A-I      intronic
chr16:77386745(-) A-I      intronic
chr16:77330703(-) A-I      intronic
chr16:77372211(-) A-I      intronic
chr16:77321547(-) A-I      intronic
chr16:77332594(-) A-I      intronic
chr16:77414944(-) A-I      intronic
chr16:77371897(-) A-I      intronic
chr16:77332620(-) A-I      intronic
chr16:77321548(-) A-I      intronic
chr16:77412175(-) A-I      intronic
chr16:77372606(-) A-I      intronic
chr16:77417555(-) A-I      intronic
chr16:77326091(-) A-I      intronic
chr16:77338339(-) A-I      intronic
chr16:77372200(-) A-I      intronic
chr16:77435040(-) A-I      intronic
chr16:77330631(-) A-I      intronic
chr16:77413582(-) A-I      intronic
chr16:77445681(-) A-I      intronic
chr16:77372594(-) A-I      intronic
chr16:77321562(-) A-I      intronic
chr16:77374738(-) A-I      intronic
chr16:77332606(-) A-I      intronic
chr16:77413553(-) A-I      intronic
chr16:77434543(-) A-I      intronic
chr16:77372407(-) A-I      intronic
chr16:77430771(-) A-I      intronic
chr16:77332683(-) A-I      intronic
chr16:77318248(-) A-I      intronic
chr16:77321467(-) A-I      intronic
chr16:77386751(-) A-I      intronic
chr16:77321442(-) A-I      intronic
chr16:77460799(-) A-I      intronic
chr16:77372406(-) A-I      intronic
chr16:77326151(-) A-I      intronic
chr16:77415636(-) A-I      intronic
chr16:77445712(-) A-I      intronic
chr16:77318200(-) A-I      intronic
chr16:77412170(-) A-I      intronic
chr16:77321542(-) A-I      intronic
chr16:77332468(-) A-I      intronic
chr16:77416398(-) A-I      intronic
chr16:77371922(-) A-I      intronic
chr16:77372804(-) A-I      intronic
chr16:77331933(-) A-I      intronic
chr16:77372270(-) A-I      intronic
chr16:77371971(-) A-I      intronic
chr16:77409982(-) A-I      intronic
chr16:77414910(-) A-I      intronic
chr16:77416388(-) A-I      intronic
chr16:77372683(-) A-I      intronic
chr16:77332667(-) A-I      intronic
chr16:77372713(-) A-I      intronic
chr16:77372335(-) A-I      intronic
chr16:77372661(-) A-I      intronic
chr16:77331918(-) A-I      intronic
chr16:77322934(-) A-I      intronic
chr16:77374589(-) A-I      intronic
chr16:77367624(-) A-I      intronic
chr16:77361447(-) A-I      intronic
chr16:77318143(-) A-I      intronic
chr16:77374737(-) A-I      intronic
chr16:77460317(-) A-I      intronic
chr16:77322833(-) A-I      intronic
chr16:77372271(-) A-I      intronic
chr16:77460373(-) A-I      intronic
chr16:77332648(-) A-I      intronic
chr16:77361433(-) A-I      intronic
chr16:77374592(-) A-I      intronic
chr16:77322790(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ADAMTS18
chr16:77317262-77317263(-) m6A 3'UTR//intron       -
chr16:77317321-77317322(-) m6A 3'UTR//intron       -
chr16:77317382-77317383(-) m6A 3'UTR//intron       -
chr16:77317451-77317452(-) m6A 3'UTR//intron       -
chr16:77317458-77317459(-) m6A 3'UTR//intron       -
chr16:77317464-77317465(-) m6A 3'UTR//intron       -
chr16:77317505-77317506(-) m6A 3'UTR//intron       -
chr16:77317529-77317530(-) m6A 3'UTR//intron       -
chr16:77317541-77317542(-) m6A 3'UTR//intron       -
chr16:77317711-77317712(-) m6A 3'UTR//intron       -
chr16:77465275-77465276(-) m6A CDS//exon       -
chr16:77465283-77465284(-) m6A CDS//exon       -
chr16:77465353-77465354(-) m6A CDS//exon       -
chr16:77465365-77465366(-) m6A CDS//exon       -
chr16:77465371-77465372(-) m6A CDS//exon       -
chr16:77468811-77468812(-) m6A 5'UTR       27773536
chr16:77468886-77468887(-) m6A 5'UTR       27773536
chr16:77468910-77468911(-) m6A 5'UTR       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ADAMTS18
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-5-5p
Interactor2: ADAMTS18

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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