Basic Information:

  VIRBase ID:  

VHID00497292

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:  MIMAT0015218          GLIPR2:  NR_104641     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-5p	GLIPR2
miRBase Accession/Entrez ID	MIMAT0015218	152007
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C9orf19//GAPR-1//GAPR1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GLIPR2	chr9:36138431(+) A-I      intronic chr9:36159803(+) A-I      intronic chr9:36159798(+) A-I      intronic chr9:36159788(+) A-I      intronic chr9:36159787(+) A-I      intronic chr9:36159768(+) A-I      intronic chr9:36159762(+) A-I      intronic chr9:36157913(+) A-I      intronic chr9:36157903(+) A-I      intronic chr9:36156164(+) A-I      intronic chr9:36156349(+) A-I      intronic chr9:36157418(+) A-I      intronic chr9:36157424(+) A-I      intronic chr9:36157516(+) A-I      intronic chr9:36157518(+) A-I      intronic chr9:36156086(+) A-I      intronic chr9:36157841(+) A-I      intronic chr9:36157871(+) A-I      intronic chr9:36157939(+) A-I      intronic chr9:36156333(+) A-I      intronic chr9:36157943(+) A-I      intronic chr9:36157949(+) A-I      intronic chr9:36158012(+) A-I      intronic chr9:36158833(+) A-I      intronic chr9:36158852(+) A-I      intronic chr9:36158878(+) A-I      intronic chr9:36158902(+) A-I      intronic chr9:36159777(+) A-I      intronic chr9:36153070(+) A-I      intronic chr9:36153046(+) A-I      intronic chr9:36159816(+) A-I      intronic chr9:36159824(+) A-I      intronic chr9:36160137(+) A-I      intronic chr9:36160150(+) A-I      intronic chr9:36160166(+) A-I      intronic chr9:36160187(+) A-I      intronic chr9:36160194(+) A-I      intronic chr9:36160200(+) A-I      intronic chr9:36160203(+) A-I      intronic chr9:36160229(+) A-I      intronic chr9:36160792(+) A-I      intronic chr9:36160814(+) A-I      intronic chr9:36160824(+) A-I      intronic chr9:36160855(+) A-I      intronic chr9:36160862(+) A-I      intronic chr9:36161967(+) A-I      intronic chr9:36162087(+) A-I      intronic chr9:36157618(+) A-I      intronic chr9:36156011(+) A-I      intronic chr9:36156006(+) A-I      intronic chr9:36155891(+) A-I      intronic chr9:36155886(+) A-I      intronic chr9:36155837(+) A-I      intronic chr9:36155815(+) A-I      intronic chr9:36155506(+) A-I      intronic chr9:36156336(+) A-I      intronic chr9:36156341(+) A-I      intronic chr9:36156344(+) A-I      intronic chr9:36156325(+) A-I      intronic chr9:36156195(+) A-I      intronic chr9:36156156(+) A-I      intronic chr9:36156119(+) A-I      intronic chr9:36156096(+) A-I      intronic chr9:36155503(+) A-I      intronic chr9:36155502(+) A-I      intronic chr9:36155471(+) A-I      intronic chr9:36153714(+) A-I      intronic chr9:36153636(+) A-I      intronic chr9:36160256(+) A-I      intronic chr9:36156157(+) A-I      intronic chr9:36156309(+) A-I      intronic chr9:36160160(+) A-I      intronic chr9:36138243(+) A-I      intronic chr9:36156152(+) A-I      intronic chr9:36160829(+) A-I      intronic chr9:36160469(+) A-I      intronic chr9:36160090(+) A-I      intronic chr9:36154153(+) A-I      intronic chr9:36155440(+) A-I      intronic chr9:36157088(+) A-I      intronic chr9:36157889(+) A-I      intronic chr9:36158971(+) A-I      intronic chr9:36158977(+) A-I      intronic chr9:36158951(+) A-I      intronic chr9:36154172(+) A-I      intronic chr9:36153751(+) A-I      intronic chr9:36156151(+) A-I      intronic chr9:36157631(+) A-I      intronic chr9:36160074(+) A-I      intronic chr9:36138302(+) A-I      intronic chr9:36161953(+) A-I      intronic chr9:36153057(+) A-I      intronic chr9:36159749(+) A-I      intronic chr9:36160267(+) A-I      intronic chr9:36159763(+) A-I      intronic chr9:36153040(+) A-I      intronic chr9:36154156(+) A-I      intronic chr9:36153045(+) A-I      intronic chr9:36161972(+) A-I      intronic chr9:36156087(+) A-I      intronic chr9:36156249(+) A-I      intronic chr9:36157524(+) A-I      intronic chr9:36155408(+) A-I      intronic chr9:36159690(+) A-I      intronic chr9:36159858(+) A-I      intronic chr9:36159852(+) A-I      intronic chr9:36159754(+) A-I      intronic chr9:36154118(+) A-I      intronic chr9:36159826(+) A-I      intronic chr9:36153031(+) A-I      intronic chr9:36157565(+) A-I      intronic chr9:36157849(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GLIPR2	chr9:36160254(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GLIPR2	chr9:36141888-36141889(+) m6A intron       24981863 chr9:36141897-36141898(+) m6A intron       24981863 chr9:36147789-36147790(+) m6A CDS//exon//intron       24981863 chr9:36148617-36148618(+) m6A CDS//exon//intron       24209618 chr9:36148643-36148644(+) m6A CDS//exon//intron       24209618 chr9:36150907-36150908(+) m6A CDS//exon//intron       24209618 chr9:36150942-36150943(+) m6A CDS//exon//intron       24209618 chr9:36162385-36162386(+) m6A CDS//exon       24209618 chr9:36162547-36162548(+) m6A 3'UTR//exon       24209618//24981863 chr9:36162577-36162578(+) m6A 3'UTR//exon       24209618//24981863 chr9:36162666-36162667(+) m6A 3'UTR//exon       24209618 chr9:36162740-36162741(+) m6A 3'UTR//exon       24209618 chr9:36163078-36163079(+) m6A 3'UTR//exon       - chr9:36163128-36163129(+) m6A 3'UTR//exon       - chr9:36163233-36163234(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GLIPR2	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-5p
Interactor2: GLIPR2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg