Detail Information

Basic Information:


  VIRBase ID:  

VHID00497198

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:           MORN4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-5-5p MORN4
miRBase
Accession/Entrez ID		 MIMAT0015218 118812
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - bA548K23.4//C10orf83//rtp//UTA

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MORN4
chr10:99377744(-) A-I      intronic
chr10:99381560(-) A-I      intronic
chr10:99380517(-) A-I      intronic
chr10:99383140(-) A-I      intronic
chr10:99382340(-) A-I      intronic
chr10:99383158(-) A-I      intronic
chr10:99386598(-) A-I      intronic
chr10:99386593(-) A-I      intronic
chr10:99389771(-) A-I      intronic
chr10:99380635(-) A-I      intronic
chr10:99389032(-) A-I      intronic
chr10:99390802(-) A-I      intronic
chr10:99391592(-) A-I      intronic
chr10:99379030(-) A-I      intronic
chr10:99383631(-) A-I      intronic
chr10:99383625(-) A-I      intronic
chr10:99378198(-) A-I      intronic
chr10:99389578(-) A-I      intronic
chr10:99390805(-) A-I      intronic
chr10:99389755(-) A-I      intronic
chr10:99378159(-) A-I      intronic
chr10:99391570(-) A-I      intronic
chr10:99378100(-) A-I      intronic
chr10:99391597(-) A-I      intronic
chr10:99391560(-) A-I      intronic
chr10:99378150(-) A-I      intronic
chr10:99378999(-) A-I      intronic
chr10:99381510(-) A-I      intronic
chr10:99391545(-) A-I      intronic
chr10:99391691(-) A-I      intronic
chr10:99378194(-) A-I      intronic
chr10:99378098(-) A-I      intronic
chr10:99381500(-) A-I      intronic
chr10:99388899(-) A-I      intronic
chr10:99381522(-) A-I      intronic
chr10:99382793(-) A-I      intronic
chr10:99382780(-) A-I      intronic
chr10:99388488(-) A-I      intronic
chr10:99378176(-) A-I      intronic
chr10:99388564(-) A-I      intronic
chr10:99388516(-) A-I      intronic
chr10:99381410(-) A-I      intronic
chr10:99375136(-) A-I      3'UTR
chr10:99375121(-) A-I      3'UTR
chr10:99385717(-) A-I      intronic
chr10:99382357(-) A-I      intronic
chr10:99381588(-) A-I      intronic
chr10:99381449(-) A-I      intronic
chr10:99381380(-) A-I      intronic
chr10:99381455(-) A-I      intronic
chr10:99388535(-) A-I      intronic
chr10:99381438(-) A-I      intronic
chr10:99382344(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MORN4
chr10:99381380(-) A-I intron -    15342557
chr10:99381410(-) A-I intron -    15342557
chr10:99381438(-) A-I intron -    15342557
chr10:99381449(-) A-I intron -    15342557
chr10:99381455(-) A-I intron -    15342557
chr10:99381500(-) A-I intron -    15342557
chr10:99381510(-) A-I intron -    15342557
chr10:99381522(-) A-I intron -    15342557
chr10:99381588(-) A-I intron -    15342557
chr10:99382340(-) A-I intron -    15342557
chr10:99382344(-) A-I intron -    15342557
chr10:99382357(-) A-I intron -    15342557

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MORN4
chr10:99374316-99374317(-) m6A 3'UTR       27773535
chr10:99374524-99374525(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22608085
chr10:99374590-99374591(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22608085
chr10:99374600-99374601(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22608085
chr10:99374612-99374613(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr10:99374637-99374638(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr10:99374647-99374648(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr10:99374660-99374661(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr10:99374708-99374709(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr10:99375362-99375363(-) m6A 3'UTR       -
chr10:99375730-99375731(-) m6A 3'UTR       25456834
chr10:99375775-99375776(-) m6A 3'UTR       24209618//25456834//22608085
chr10:99375830-99375831(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr10:99375864-99375865(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr10:99375869-99375870(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr10:99375951-99375952(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr10:99379333-99379334(-) m6A CDS//intron       27371828
chr10:99393147-99393148(-) m6A 5'UTR       25456834//24981863//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MORN4
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-5-5p
Interactor2: MORN4

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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