Basic Information:

  VIRBase ID:  

VHID00497131

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:  MIMAT0015218          CREB3L1:  NM_052854     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-5p	CREB3L1
miRBase Accession/Entrez ID	MIMAT0015218	90993
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	OASIS//OI16

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CREB3L1	chr11:46314411(+) A-I      intronic chr11:46335728(+) A-I      intronic chr11:46335721(+) A-I      intronic chr11:46314373(+) A-I      intronic chr11:46314412(+) A-I      intronic chr11:46314420(+) A-I      intronic chr11:46335697(+) A-I      intronic chr11:46314393(+) A-I      intronic chr11:46335704(+) A-I      intronic chr11:46335709(+) A-I      intronic chr11:46335710(+) A-I      intronic chr11:46309362(+) A-I      intronic chr11:46309279(+) A-I      intronic chr11:46309274(+) A-I      intronic chr11:46309119(+) A-I      intronic chr11:46308989(+) A-I      intronic chr11:46308257(+) A-I      intronic chr11:46308247(+) A-I      intronic chr11:46308242(+) A-I      intronic chr11:46308232(+) A-I      intronic chr11:46308185(+) A-I      intronic chr11:46328619(+) A-I      intronic chr11:46308175(+) A-I      intronic chr11:46309365(+) A-I      intronic chr11:46305222(+) A-I      intronic chr11:46305216(+) A-I      intronic chr11:46305202(+) A-I      intronic chr11:46304724(+) A-I      intronic chr11:46328613(+) A-I      intronic chr11:46328007(+) A-I      intronic chr11:46304635(+) A-I      intronic chr11:46308983(+) A-I      intronic chr11:46327948(+) A-I      intronic chr11:46327847(+) A-I      intronic chr11:46327712(+) A-I      intronic chr11:46308086(+) A-I      intronic chr11:46326264(+) A-I      intronic chr11:46325791(+) A-I      intronic chr11:46325101(+) A-I      intronic chr11:46325098(+) A-I      intronic chr11:46335668(+) A-I      intronic chr11:46320009(+) A-I      intronic chr11:46319994(+) A-I      intronic chr11:46309713(+) A-I      intronic chr11:46310850(+) A-I      intronic chr11:46309895(+) A-I      intronic chr11:46309452(+) A-I      intronic chr11:46336398(+) A-I      intronic chr11:46336061(+) A-I      intronic chr11:46309447(+) A-I      intronic chr11:46309420(+) A-I      intronic chr11:46309400(+) A-I      intronic chr11:46309380(+) A-I      intronic chr11:46309371(+) A-I      intronic chr11:46308177(+) A-I      intronic chr11:46328751(+) A-I      intronic chr11:46309120(+) A-I      intronic chr11:46327720(+) A-I      intronic chr11:46335642(+) A-I      intronic chr11:46327889(+) A-I      intronic chr11:46309750(+) A-I      intronic chr11:46309653(+) A-I      intronic chr11:46336511(+) A-I      intronic chr11:46336448(+) A-I      intronic chr11:46336400(+) A-I      intronic chr11:46336067(+) A-I      intronic chr11:46335674(+) A-I      intronic chr11:46335639(+) A-I      intronic chr11:46335172(+) A-I      intronic chr11:46328763(+) A-I      intronic chr11:46328746(+) A-I      intronic chr11:46308999(+) A-I      intronic chr11:46327795(+) A-I      intronic chr11:46341350(+) A-I      intronic chr11:46308261(+) A-I      intronic chr11:46326382(+) A-I      intronic chr11:46308873(+) A-I      intronic chr11:46341319(+) A-I      intronic chr11:46335669(+) A-I      intronic chr11:46327789(+) A-I      intronic chr11:46308171(+) A-I      intronic chr11:46310836(+) A-I      intronic chr11:46309885(+) A-I      intronic chr11:46341336(+) A-I      intronic chr11:46341332(+) A-I      intronic chr11:46309113(+) A-I      intronic chr11:46335961(+) A-I      intronic chr11:46326289(+) A-I      intronic chr11:46332928(+) A-I      intronic chr11:46333259(+) A-I      intronic chr11:46325929(+) A-I      intronic chr11:46309816(+) A-I      intronic chr11:46308095(+) A-I      intronic chr11:46309734(+) A-I      intronic chr11:46336442(+) A-I      intronic chr11:46309907(+) A-I      intronic chr11:46336530(+) A-I      intronic chr11:46326294(+) A-I      intronic chr11:46336053(+) A-I      intronic chr11:46308174(+) A-I      intronic chr11:46308256(+) A-I      intronic chr11:46324412(+) A-I      intronic chr11:46323094(+) A-I      intronic chr11:46309036(+) A-I      intronic chr11:46336424(+) A-I      intronic chr11:46309125(+) A-I      intronic chr11:46327899(+) A-I      intronic chr11:46320129(+) A-I      intronic chr11:46309727(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CREB3L1	chr11:46299254-46299255(+) m6A 5'UTR       24209618//25456834//24981863 chr11:46299552-46299553(+) m6A 5'UTR       24209618 chr11:46299596-46299597(+) m6A 5'UTR       - chr11:46333961-46333962(+) m6A CDS//exon       - chr11:46334020-46334021(+) m6A CDS//exon       24981863 chr11:46334408-46334409(+) m6A CDS       24981863 chr11:46334424-46334425(+) m6A CDS       24981863 chr11:46334431-46334432(+) m6A CDS       24981863 chr11:46334450-46334451(+) m6A CDS       24981863 chr11:46342454-46342455(+) m6A 3'UTR//exon       24209618//25456834//24981863 chr11:46342522-46342523(+) m6A 3'UTR//exon       24209618//25456834//24981863 chr11:46342526-46342527(+) m6A 3'UTR//exon       24981863 chr11:46342605-46342606(+) m6A 3'UTR//exon       24209618//25456834//24981863 chr11:46342634-46342635(+) m6A 3'UTR//exon       24209618//24981863 chr11:46342665-46342666(+) m6A 3'UTR//exon       24209618//24981863 chr11:46342672-46342673(+) m6A 3'UTR//exon       24981863 chr11:46342696-46342697(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CREB3L1	Chromatin K562 cells     - Cytosol K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-5p
Interactor2: CREB3L1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg