Basic Information:

  VIRBase ID:  

VHID00497118

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:  MIMAT0015218          ZNF766:  NM_001010851     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-5p	ZNF766
miRBase Accession/Entrez ID	MIMAT0015218	90321
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF766	chr19:52795234(+) A-I      3'UTR chr19:52795244(+) A-I      3'UTR chr19:52795250(+) A-I      3'UTR chr19:52783981(+) A-I      intronic chr19:52795218(+) A-I      3'UTR chr19:52775102(+) A-I      intronic chr19:52779051(+) A-I      intronic chr19:52775124(+) A-I      intronic chr19:52794960(+) A-I      3'UTR chr19:52794975(+) A-I      3'UTR chr19:52794997(+) A-I      3'UTR chr19:52784616(+) A-I      intronic chr19:52794859(+) A-I      3'UTR chr19:52784614(+) A-I      intronic chr19:52784586(+) A-I      intronic chr19:52784582(+) A-I      intronic chr19:52784570(+) A-I      intronic chr19:52784404(+) A-I      intronic chr19:52774112(+) A-I      intronic chr19:52774118(+) A-I      intronic chr19:52785674(+) A-I      intronic chr19:52792291(+) A-I      intronic chr19:52785708(+) A-I      intronic chr19:52784320(+) A-I      intronic chr19:52784249(+) A-I      intronic chr19:52793045(+) A-I      intronic chr19:52793042(+) A-I      intronic chr19:52793034(+) A-I      intronic chr19:52774137(+) A-I      intronic chr19:52787228(+) A-I      intronic chr19:52787196(+) A-I      intronic chr19:52784253(+) A-I      intronic chr19:52784251(+) A-I      intronic chr19:52775086(+) A-I      intronic chr19:52783993(+) A-I      intronic chr19:52783985(+) A-I      intronic chr19:52783975(+) A-I      intronic chr19:52783965(+) A-I      intronic chr19:52785768(+) A-I      intronic chr19:52785769(+) A-I      intronic chr19:52774211(+) A-I      intronic chr19:52774273(+) A-I      intronic chr19:52774278(+) A-I      intronic chr19:52775092(+) A-I      intronic chr19:52775115(+) A-I      intronic chr19:52775195(+) A-I      intronic chr19:52775738(+) A-I      intronic chr19:52784277(+) A-I      intronic chr19:52784297(+) A-I      intronic chr19:52784304(+) A-I      intronic chr19:52793160(+) A-I      intronic chr19:52793139(+) A-I      intronic chr19:52793133(+) A-I      intronic chr19:52785796(+) A-I      intronic chr19:52787047(+) A-I      intronic chr19:52784354(+) A-I      intronic chr19:52793107(+) A-I      intronic chr19:52793070(+) A-I      intronic chr19:52793066(+) A-I      intronic chr19:52777993(+) A-I      intronic chr19:52778003(+) A-I      intronic chr19:52778028(+) A-I      intronic chr19:52781244(+) A-I      intronic chr19:52781365(+) A-I      intronic chr19:52783596(+) A-I      intronic chr19:52783856(+) A-I      intronic chr19:52793065(+) A-I      intronic chr19:52794956(+) A-I      3'UTR chr19:52794881(+) A-I      3'UTR chr19:52794918(+) A-I      3'UTR chr19:52794924(+) A-I      3'UTR chr19:52794857(+) A-I      3'UTR chr19:52794783(+) A-I      3'UTR chr19:52794865(+) A-I      3'UTR chr19:52794869(+) A-I      3'UTR chr19:52794757(+) A-I      3'UTR chr19:52794891(+) A-I      3'UTR chr19:52794937(+) A-I      3'UTR chr19:52794944(+) A-I      3'UTR chr19:52794892(+) A-I      3'UTR chr19:52777878(+) A-I      intronic chr19:52774234(+) A-I      intronic chr19:52781338(+) A-I      intronic chr19:52776437(+) A-I      intronic chr19:52777907(+) A-I      intronic chr19:52781329(+) A-I      intronic chr19:52779095(+) A-I      intronic chr19:52784281(+) A-I      intronic chr19:52775837(+) A-I      intronic chr19:52777979(+) A-I      intronic chr19:52783600(+) A-I      intronic chr19:52784340(+) A-I      intronic chr19:52783492(+) A-I      intronic chr19:52781463(+) A-I      intronic chr19:52784693(+) A-I      intronic chr19:52784562(+) A-I      intronic chr19:52787263(+) A-I      intronic chr19:52791457(+) A-I      intronic chr19:52782854(+) A-I      intronic chr19:52784596(+) A-I      intronic chr19:52775048(+) A-I      intronic chr19:52784196(+) A-I      intronic chr19:52775042(+) A-I      intronic chr19:52774190(+) A-I      intronic chr19:52784001(+) A-I      intronic chr19:52777990(+) A-I      intronic chr19:52783562(+) A-I      intronic chr19:52785815(+) A-I      intronic chr19:52775185(+) A-I      intronic chr19:52775080(+) A-I      intronic chr19:52787188(+) A-I      intronic chr19:52777880(+) A-I      intronic chr19:52775849(+) A-I      intronic chr19:52783161(+) A-I      intronic chr19:52775128(+) A-I      intronic chr19:52784221(+) A-I      intronic chr19:52787109(+) A-I      intronic chr19:52777881(+) A-I      intronic chr19:52774132(+) A-I      intronic chr19:52781290(+) A-I      intronic chr19:52779208(+) A-I      intronic chr19:52784619(+) A-I      intronic chr19:52774220(+) A-I      intronic chr19:52787211(+) A-I      intronic chr19:52784625(+) A-I      intronic chr19:52795129(+) A-I      3'UTR chr19:52783152(+) A-I      intronic chr19:52782865(+) A-I      intronic chr19:52781866(+) A-I      intronic chr19:52794848(+) A-I      3'UTR chr19:52784652(+) A-I      intronic chr19:52781319(+) A-I      intronic chr19:52784261(+) A-I      intronic chr19:52794986(+) A-I      3'UTR chr19:52781375(+) A-I      intronic chr19:52783953(+) A-I      intronic chr19:52785822(+) A-I      intronic chr19:52795204(+) A-I      3'UTR chr19:52784517(+) A-I      intronic chr19:52774312(+) A-I      intronic chr19:52793237(+) A-I      intronic chr19:52784247(+) A-I      intronic chr19:52774167(+) A-I      intronic chr19:52794814(+) A-I      3'UTR chr19:52794800(+) A-I      3'UTR chr19:52783528(+) A-I      intronic chr19:52783188(+) A-I      intronic chr19:52784201(+) A-I      intronic chr19:52774313(+) A-I      intronic chr19:52789738(+) A-I      intronic chr19:52777975(+) A-I      intronic chr19:52783129(+) A-I      intronic chr19:52793238(+) A-I      intronic chr19:52784095(+) A-I      intronic chr19:52774226(+) A-I      intronic chr19:52774155(+) A-I      intronic chr19:52784678(+) A-I      intronic chr19:52784651(+) A-I      intronic chr19:52781682(+) A-I      intronic chr19:52774138(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF766	chr19:52780457(+) A-G intron -    22484847 chr19:52780458(+) A-G intron -    22484847 chr19:52782854(+) A-G intron -    22484847 chr19:52782865(+) A-G intron -    22484847 chr19:52782867(+) A-G intron -    22484847 chr19:52783528(+) A-G intron -    22484847 chr19:52795232(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF766	chr19:52772841-52772842(+) m6A 5'UTR       24981863 chr19:52777716-52777717(+) m6A 5'UTR//intron       24981863 chr19:52777830-52777831(+) m1A 5'UTR//exon//intron       26863196 chr19:52780719-52780720(+) m6A 5'UTR//intron       24981863 chr19:52785365-52785366(+) m6A 5'UTR//CDS//exon//intron       24981863 chr19:52785424-52785425(+) m6A 5'UTR//CDS//exon//intron       24981863 chr19:52785466-52785467(+) m6A CDS//exon//intron       24981863 chr19:52785475-52785476(+) m6A CDS//exon//intron       24981863 chr19:52786584-52786585(+) m6A CDS       24981863 chr19:52786596-52786597(+) m6A CDS       24981863 chr19:52793351-52793352(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr19:52793403-52793404(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr19:52793515-52793516(+) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//22608085 chr19:52793532-52793533(+) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//22608085 chr19:52793574-52793575(+) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//22608085 chr19:52793598-52793599(+) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//22608085 chr19:52793682-52793683(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:52793710-52793711(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:52793720-52793721(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:52793739-52793740(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:52793766-52793767(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:52793934-52793935(+) m6A 3'UTR//CDS       24284625//24981863//22575960//22608085 chr19:52794018-52794019(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr19:52794102-52794103(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr19:52794186-52794187(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr19:52794270-52794271(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr19:52794354-52794355(+) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr19:52794446-52794447(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr19:52794460-52794461(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr19:52794555-52794556(+) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr19:52794572-52794573(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:52794580-52794581(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:52794598-52794599(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:52794649-52794650(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:52794683-52794684(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:52794810-52794811(+) m6A 3'UTR//intron       24981863 chr19:52794833-52794834(+) m6A 3'UTR//intron       24981863 chr19:52795004-52795005(+) m6A 3'UTR//intron       24981863 chr19:52795096-52795097(+) m6A 3'UTR//intron       24981863 chr19:52795368-52795369(+) m6A 3'UTR//intron       24284625 chr19:52795496-52795497(+) m6A 3'UTR       24284625//24981863//22608085 chr19:52795534-52795535(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr19:52795547-52795548(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr19:52795562-52795563(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr19:52795674-52795675(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr19:52795710-52795711(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:52795791-52795792(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:52795832-52795833(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:52795864-52795865(+) m6A 3'UTR       24209618//24981863//22608085 chr19:52795876-52795877(+) m6A 3'UTR       24209618//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF766	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-5p
Interactor2: ZNF766

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg