Basic Information:

  VIRBase ID:  

VHID00497034

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:  MIMAT0015218          SPATA16:  NM_031955     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-5p	SPATA16
miRBase Accession/Entrez ID	MIMAT0015218	83893
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NYD-SP12//SPGF6

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SPATA16	chr3:172679440(-) A-I      intronic chr3:172679404(-) A-I      intronic chr3:172679403(-) A-I      intronic chr3:172769299(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SPATA16	chr3:172835215-172835216(-) m6A CDS       25456834 chr3:172835233-172835234(-) m6A CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SPATA16	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-5p
Interactor2: SPATA16

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg