Basic Information:

  VIRBase ID:  

VHID00496865

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:  MIMAT0015218          CLSTN2:  NM_022131     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-5p	CLSTN2
miRBase Accession/Entrez ID	MIMAT0015218	64084
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALC-GAMMA//alcagamma//CDHR13//CS2//CSTN2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CLSTN2	chr3:140086146(+) A-I      intronic chr3:140086209(+) A-I      intronic chr3:140086199(+) A-I      intronic chr3:140086194(+) A-I      intronic chr3:139898195(+) A-I      intronic chr3:140163114(+) A-I      intronic chr3:139692620(+) A-I      intronic chr3:139715251(+) A-I      intronic chr3:139715704(+) A-I      intronic chr3:139715285(+) A-I      intronic chr3:139735562(+) A-I      intronic chr3:139735530(+) A-I      intronic chr3:139715700(+) A-I      intronic chr3:139735494(+) A-I      intronic chr3:139733323(+) A-I      intronic chr3:140210614(+) A-I      intronic chr3:139735520(+) A-I      intronic chr3:139733289(+) A-I      intronic chr3:139997791(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CLSTN2	chr3:140285910-140285911(+) m6A 3'UTR       24209618 chr3:140285924-140285925(+) m6A 3'UTR       24209618 chr3:140285939-140285940(+) m6A 3'UTR       24209618 chr3:140285948-140285949(+) m6A 3'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CLSTN2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-5p
Interactor2: CLSTN2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg