Basic Information:

  VIRBase ID:  

VHID00496463

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:  MIMAT0015218          NUP160:  NR_134636     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-5p	NUP160
miRBase Accession/Entrez ID	MIMAT0015218	23279
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NPHS19

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NUP160	chr11:47863384(-) A-I      intronic chr11:47818335(-) A-I      intronic chr11:47818361(-) A-I      intronic chr11:47818345(-) A-I      intronic chr11:47818334(-) A-I      intronic chr11:47804516(-) A-I      intronic chr11:47818365(-) A-I      intronic chr11:47818337(-) A-I      intronic chr11:47818336(-) A-I      intronic chr11:47818331(-) A-I      intronic chr11:47832387(-) A-I      intronic chr11:47848833(-) A-I      intronic chr11:47848659(-) A-I      NonSyn:Ser->Gly chr11:47848702(-) A-I      Syn:Ser->Ser chr11:47819080(-) A-I      intronic chr11:47838155(-) A-I      intronic chr11:47832215(-) A-I      intronic chr11:47830409(-) A-I      intronic chr11:47848381(-) A-I      intronic chr11:47838265(-) A-I      intronic chr11:47820211(-) A-I      intronic chr11:47846043(-) A-I      intronic chr11:47820266(-) A-I      intronic chr11:47838144(-) A-I      intronic chr11:47820273(-) A-I      intronic chr11:47831968(-) A-I      intronic chr11:47860509(-) A-I      intronic chr11:47863259(-) A-I      intronic chr11:47845993(-) A-I      intronic chr11:47832016(-) A-I      intronic chr11:47839169(-) A-I      intronic chr11:47826441(-) A-I      intronic chr11:47812238(-) A-I      intronic chr11:47846038(-) A-I      intronic chr11:47838110(-) A-I      intronic chr11:47845932(-) A-I      intronic chr11:47845915(-) A-I      intronic chr11:47846253(-) A-I      intronic chr11:47830418(-) A-I      intronic chr11:47848207(-) A-I      intronic chr11:47845913(-) A-I      intronic chr11:47847395(-) A-I      intronic chr11:47847300(-) A-I      intronic chr11:47847278(-) A-I      intronic chr11:47845316(-) A-I      intronic chr11:47845251(-) A-I      intronic chr11:47845936(-) A-I      intronic chr11:47816545(-) A-I      intronic chr11:47816567(-) A-I      intronic chr11:47847271(-) A-I      intronic chr11:47848768(-) A-I      intronic chr11:47816541(-) A-I      intronic chr11:47864464(-) A-I      intronic chr11:47849581(-) A-I      intronic chr11:47833027(-) A-I      intronic chr11:47845247(-) A-I      intronic chr11:47812262(-) A-I      intronic chr11:47838142(-) A-I      intronic chr11:47864418(-) A-I      intronic chr11:47806933(-) A-I      intronic chr11:47832377(-) A-I      intronic chr11:47814676(-) A-I      intronic chr11:47846317(-) A-I      intronic chr11:47845134(-) A-I      intronic chr11:47848864(-) A-I      intronic chr11:47846773(-) A-I      intronic chr11:47838204(-) A-I      intronic chr11:47838198(-) A-I      intronic chr11:47815431(-) A-I      intronic chr11:47831994(-) A-I      intronic chr11:47816570(-) A-I      intronic chr11:47846568(-) A-I      intronic chr11:47815398(-) A-I      intronic chr11:47802935(-) A-I      intronic chr11:47848776(-) A-I      intronic chr11:47815390(-) A-I      intronic chr11:47848914(-) A-I      intronic chr11:47815368(-) A-I      intronic chr11:47814810(-) A-I      intronic chr11:47814722(-) A-I      intronic chr11:47815430(-) A-I      intronic chr11:47846562(-) A-I      intronic chr11:47838164(-) A-I      intronic chr11:47849663(-) A-I      intronic chr11:47804500(-) A-I      intronic chr11:47853718(-) A-I      intronic chr11:47846397(-) A-I      intronic chr11:47818897(-) A-I      intronic chr11:47846526(-) A-I      intronic chr11:47844045(-) A-I      intronic chr11:47843053(-) A-I      intronic chr11:47814719(-) A-I      intronic chr11:47823096(-) A-I      intronic chr11:47863258(-) A-I      intronic chr11:47814718(-) A-I      intronic chr11:47844005(-) A-I      intronic chr11:47814717(-) A-I      intronic chr11:47814716(-) A-I      intronic chr11:47814715(-) A-I      intronic chr11:47818915(-) A-I      intronic chr11:47814710(-) A-I      intronic chr11:47818994(-) A-I      intronic chr11:47844003(-) A-I      intronic chr11:47814654(-) A-I      intronic chr11:47814600(-) A-I      intronic chr11:47814569(-) A-I      intronic chr11:47814548(-) A-I      intronic chr11:47819037(-) A-I      intronic chr11:47843921(-) A-I      intronic chr11:47812260(-) A-I      intronic chr11:47811635(-) A-I      intronic chr11:47830570(-) A-I      intronic chr11:47846052(-) A-I      intronic chr11:47838612(-) A-I      intronic chr11:47812219(-) A-I      intronic chr11:47811841(-) A-I      intronic chr11:47804484(-) A-I      intronic chr11:47838161(-) A-I      intronic chr11:47867566(-) A-I      intronic chr11:47832245(-) A-I      intronic chr11:47804483(-) A-I      intronic chr11:47826444(-) A-I      intronic chr11:47843915(-) A-I      intronic chr11:47848282(-) A-I      intronic chr11:47864423(-) A-I      intronic chr11:47832804(-) A-I      intronic chr11:47804475(-) A-I      intronic chr11:47804412(-) A-I      intronic chr11:47804348(-) A-I      intronic chr11:47803622(-) A-I      intronic chr11:47803066(-) A-I      intronic chr11:47802955(-) A-I      intronic chr11:47802943(-) A-I      intronic chr11:47814708(-) A-I      intronic chr11:47848226(-) A-I      intronic chr11:47802718(-) A-I      intronic chr11:47802614(-) A-I      intronic chr11:47802597(-) A-I      intronic chr11:47851026(-) A-I      intronic chr11:47830396(-) A-I      intronic chr11:47802585(-) A-I      intronic chr11:47802345(-) A-I      intronic chr11:47838284(-) A-I      intronic chr11:47843845(-) A-I      intronic chr11:47802340(-) A-I      intronic chr11:47849672(-) A-I      intronic chr11:47860152(-) A-I      intronic chr11:47802321(-) A-I      intronic chr11:47802295(-) A-I      intronic chr11:47802287(-) A-I      intronic chr11:47860368(-) A-I      intronic chr11:47827193(-) A-I      intronic chr11:47852628(-) A-I      intronic chr11:47848200(-) A-I      intronic chr11:47831852(-) A-I      intronic chr11:47820893(-) A-I      intronic chr11:47816638(-) A-I      intronic chr11:47838785(-) A-I      intronic chr11:47816577(-) A-I      intronic chr11:47827445(-) A-I      intronic chr11:47828955(-) A-I      intronic chr11:47867734(-) A-I      intronic chr11:47830408(-) A-I      intronic chr11:47867682(-) A-I      intronic chr11:47832236(-) A-I      intronic chr11:47867593(-) A-I      intronic chr11:47867556(-) A-I      intronic chr11:47867517(-) A-I      intronic chr11:47867474(-) A-I      intronic chr11:47867428(-) A-I      intronic chr11:47804307(-) A-I      intronic chr11:47867374(-) A-I      intronic chr11:47866893(-) A-I      intronic chr11:47844014(-) A-I      intronic chr11:47866841(-) A-I      intronic chr11:47866833(-) A-I      intronic chr11:47866831(-) A-I      intronic chr11:47866830(-) A-I      intronic chr11:47864445(-) A-I      intronic chr11:47864405(-) A-I      intronic chr11:47864376(-) A-I      intronic chr11:47827160(-) A-I      intronic chr11:47816614(-) A-I      intronic chr11:47831217(-) A-I      intronic chr11:47863407(-) A-I      intronic chr11:47863300(-) A-I      intronic chr11:47863261(-) A-I      intronic chr11:47860844(-) A-I      intronic chr11:47860836(-) A-I      intronic chr11:47860825(-) A-I      intronic chr11:47860822(-) A-I      intronic chr11:47860821(-) A-I      intronic chr11:47860800(-) A-I      intronic chr11:47860782(-) A-I      intronic chr11:47848889(-) A-I      intronic chr11:47860772(-) A-I      intronic chr11:47860754(-) A-I      intronic chr11:47860494(-) A-I      intronic chr11:47842435(-) A-I      intronic chr11:47860412(-) A-I      intronic chr11:47802869(-) A-I      intronic chr11:47860408(-) A-I      intronic chr11:47860390(-) A-I      intronic chr11:47860376(-) A-I      intronic chr11:47860373(-) A-I      intronic chr11:47811789(-) A-I      intronic chr11:47863528(-) A-I      intronic chr11:47860364(-) A-I      intronic chr11:47802592(-) A-I      intronic chr11:47815324(-) A-I      intronic chr11:47860328(-) A-I      intronic chr11:47860042(-) A-I      intronic chr11:47860001(-) A-I      intronic chr11:47853719(-) A-I      intronic chr11:47853287(-) A-I      intronic chr11:47853151(-) A-I      intronic chr11:47852615(-) A-I      intronic chr11:47852536(-) A-I      intronic chr11:47852499(-) A-I      intronic chr11:47846295(-) A-I      intronic chr11:47823066(-) A-I      intronic chr11:47812220(-) A-I      intronic chr11:47852471(-) A-I      intronic chr11:47849624(-) A-I      intronic chr11:47849458(-) A-I      intronic chr11:47849117(-) A-I      intronic chr11:47849083(-) A-I      intronic chr11:47848902(-) A-I      intronic chr11:47839039(-) A-I      intronic chr11:47839031(-) A-I      intronic chr11:47848890(-) A-I      intronic chr11:47848847(-) A-I      intronic chr11:47848388(-) A-I      intronic chr11:47838302(-) A-I      intronic chr11:47848387(-) A-I      intronic chr11:47848693(-) A-I      Syn:Pro->Pro chr11:47848701(-) A-I      NonSyn:Ser->Gly chr11:47848653(-) A-I      NonSyn:Asn->Asp chr11:47848716(-) A-I      NonSyn:Lys->Glu chr11:47848662(-) A-I      NonSyn:Thr->Ala chr11:47802297(-) A-I      intronic chr11:47802979(-) A-I      intronic chr11:47860025(-) A-I      intronic chr11:47846259(-) A-I      intronic chr11:47838606(-) A-I      intronic chr11:47812196(-) A-I      intronic chr11:47853592(-) A-I      intronic chr11:47817594(-) A-I      intronic chr11:47845038(-) A-I      intronic chr11:47846972(-) A-I      intronic chr11:47849461(-) A-I      intronic chr11:47803654(-) A-I      intronic chr11:47838154(-) A-I      intronic chr11:47867802(-) A-I      intronic chr11:47846725(-) A-I      intronic chr11:47864325(-) A-I      intronic chr11:47842191(-) A-I      intronic chr11:47860894(-) A-I      intronic chr11:47802628(-) A-I      intronic chr11:47820191(-) A-I      intronic chr11:47845990(-) A-I      intronic chr11:47864537(-) A-I      intronic chr11:47802656(-) A-I      intronic chr11:47802953(-) A-I      intronic chr11:47860456(-) A-I      intronic chr11:47849560(-) A-I      intronic chr11:47863404(-) A-I      intronic chr11:47814667(-) A-I      intronic chr11:47812223(-) A-I      intronic chr11:47849464(-) A-I      intronic chr11:47812300(-) A-I      intronic chr11:47864296(-) A-I      intronic chr11:47812975(-) A-I      intronic chr11:47802912(-) A-I      intronic chr11:47851101(-) A-I      intronic chr11:47818401(-) A-I      intronic chr11:47820808(-) A-I      intronic chr11:47814816(-) A-I      intronic chr11:47812303(-) A-I      intronic chr11:47853725(-) A-I      intronic chr11:47820260(-) A-I      intronic chr11:47832798(-) A-I      intronic chr11:47811995(-) A-I      intronic chr11:47832330(-) A-I      intronic chr11:47831918(-) A-I      intronic chr11:47867686(-) A-I      intronic chr11:47864350(-) A-I      intronic chr11:47860846(-) A-I      intronic chr11:47804375(-) A-I      intronic chr11:47803978(-) A-I      intronic chr11:47815331(-) A-I      intronic chr11:47860847(-) A-I      intronic chr11:47867801(-) A-I      intronic chr11:47842021(-) A-I      intronic chr11:47866951(-) A-I      intronic chr11:47813072(-) A-I      intronic chr11:47813029(-) A-I      intronic chr11:47824450(-) A-I      intronic chr11:47848748(-) A-I      intronic chr11:47816531(-) A-I      intronic chr11:47822214(-) A-I      intronic chr11:47860434(-) A-I      intronic chr11:47848757(-) A-I      intronic chr11:47846970(-) A-I      intronic chr11:47818439(-) A-I      intronic chr11:47867420(-) A-I      intronic chr11:47814679(-) A-I      intronic chr11:47802195(-) A-I      intronic chr11:47860682(-) A-I      intronic chr11:47853724(-) A-I      intronic chr11:47845968(-) A-I      intronic chr11:47802689(-) A-I      intronic chr11:47803965(-) A-I      intronic chr11:47863410(-) A-I      intronic chr11:47846126(-) A-I      intronic chr11:47846659(-) A-I      intronic chr11:47849530(-) A-I      intronic chr11:47848308(-) A-I      intronic chr11:47850995(-) A-I      intronic chr11:47853207(-) A-I      intronic chr11:47838216(-) A-I      intronic chr11:47860301(-) A-I      intronic chr11:47846050(-) A-I      intronic chr11:47838134(-) A-I      intronic chr11:47802611(-) A-I      intronic chr11:47803668(-) A-I      intronic chr11:47815453(-) A-I      intronic chr11:47863454(-) A-I      intronic chr11:47848869(-) A-I      intronic chr11:47863413(-) A-I      intronic chr11:47846299(-) A-I      intronic chr11:47846307(-) A-I      intronic chr11:47838590(-) A-I      intronic chr11:47843055(-) A-I      intronic chr11:47849088(-) A-I      intronic chr11:47802419(-) A-I      intronic chr11:47845901(-) A-I      intronic chr11:47803016(-) A-I      intronic chr11:47867579(-) A-I      intronic chr11:47853175(-) A-I      intronic chr11:47860299(-) A-I      intronic chr11:47849562(-) A-I      intronic chr11:47815421(-) A-I      intronic chr11:47811636(-) A-I      intronic chr11:47802288(-) A-I      intronic chr11:47848792(-) A-I      intronic chr11:47860112(-) A-I      intronic chr11:47815327(-) A-I      intronic chr11:47802252(-) A-I      intronic chr11:47804406(-) A-I      intronic chr11:47849586(-) A-I      intronic chr11:47802917(-) A-I      intronic chr11:47863378(-) A-I      intronic chr11:47812302(-) A-I      intronic chr11:47802194(-) A-I      intronic chr11:47845914(-) A-I      intronic chr11:47838971(-) A-I      intronic chr11:47860473(-) A-I      intronic chr11:47802217(-) A-I      intronic chr11:47839037(-) A-I      intronic chr11:47853359(-) A-I      intronic chr11:47802326(-) A-I      intronic chr11:47802244(-) A-I      intronic chr11:47860444(-) A-I      intronic chr11:47847116(-) A-I      intronic chr11:47804486(-) A-I      intronic chr11:47821640(-) A-I      intronic chr11:47846067(-) A-I      intronic chr11:47812211(-) A-I      intronic chr11:47803088(-) A-I      intronic chr11:47804355(-) A-I      intronic chr11:47860384(-) A-I      intronic chr11:47812244(-) A-I      intronic chr11:47867605(-) A-I      intronic chr11:47846592(-) A-I      intronic chr11:47853174(-) A-I      intronic chr11:47844041(-) A-I      intronic chr11:47802692(-) A-I      intronic chr11:47802994(-) A-I      intronic chr11:47846303(-) A-I      intronic chr11:47867434(-) A-I      intronic chr11:47827470(-) A-I      intronic chr11:47838206(-) A-I      intronic chr11:47832817(-) A-I      intronic chr11:47863364(-) A-I      intronic chr11:47804428(-) A-I      intronic chr11:47814713(-) A-I      intronic chr11:47860399(-) A-I      intronic chr11:47822069(-) A-I      intronic chr11:47838652(-) A-I      intronic chr11:47847277(-) A-I      intronic chr11:47860520(-) A-I      intronic chr11:47816571(-) A-I      intronic chr11:47867808(-) A-I      intronic chr11:47863521(-) A-I      intronic chr11:47848840(-) A-I      intronic chr11:47860416(-) A-I      intronic chr11:47860313(-) A-I      intronic chr11:47812184(-) A-I      intronic chr11:47850963(-) A-I      intronic chr11:47811917(-) A-I      intronic chr11:47816583(-) A-I      intronic chr11:47867563(-) A-I      intronic chr11:47820300(-) A-I      intronic chr11:47851029(-) A-I      intronic chr11:47832166(-) A-I      intronic chr11:47811909(-) A-I      intronic chr11:47853631(-) A-I      intronic chr11:47838643(-) A-I      intronic chr11:47849524(-) A-I      intronic chr11:47846362(-) A-I      intronic chr11:47846062(-) A-I      intronic chr11:47849600(-) A-I      intronic chr11:47853226(-) A-I      intronic chr11:47860952(-) A-I      intronic chr11:47843974(-) A-I      intronic chr11:47863337(-) A-I      intronic chr11:47822230(-) A-I      intronic chr11:47860716(-) A-I      intronic chr11:47846588(-) A-I      intronic chr11:47860323(-) A-I      intronic chr11:47860504(-) A-I      intronic chr11:47867560(-) A-I      intronic chr11:47864539(-) A-I      intronic chr11:47838468(-) A-I      intronic chr11:47866971(-) A-I      intronic chr11:47829156(-) A-I      intronic chr11:47815378(-) A-I      intronic chr11:47863522(-) A-I      intronic chr11:47863332(-) A-I      intronic chr11:47802197(-) A-I      intronic chr11:47851115(-) A-I      intronic chr11:47812237(-) A-I      intronic chr11:47844013(-) A-I      intronic chr11:47816633(-) A-I      intronic chr11:47864374(-) A-I      intronic chr11:47848853(-) A-I      intronic chr11:47826523(-) A-I      intronic chr11:47812085(-) A-I      intronic chr11:47853139(-) A-I      intronic chr11:47844064(-) A-I      intronic chr11:47860918(-) A-I      intronic chr11:47831888(-) A-I      intronic chr11:47812988(-) A-I      intronic chr11:47849106(-) A-I      intronic chr11:47848357(-) A-I      intronic chr11:47863312(-) A-I      intronic chr11:47866720(-) A-I      intronic chr11:47802248(-) A-I      intronic chr11:47867519(-) A-I      intronic chr11:47848894(-) A-I      intronic chr11:47831914(-) A-I      intronic chr11:47816141(-) A-I      intronic chr11:47817447(-) A-I      intronic chr11:47832835(-) A-I      intronic chr11:47846075(-) A-I      intronic chr11:47867818(-) A-I      intronic chr11:47860393(-) A-I      intronic chr11:47846660(-) A-I      intronic chr11:47847157(-) A-I      intronic chr11:47818382(-) A-I      intronic chr11:47848253(-) A-I      intronic chr11:47832816(-) A-I      intronic chr11:47863154(-) A-I      intronic chr11:47804457(-) A-I      intronic chr11:47816459(-) A-I      intronic chr11:47802629(-) A-I      intronic chr11:47845939(-) A-I      intronic chr11:47847332(-) A-I      intronic chr11:47845062(-) A-I      intronic chr11:47848288(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NUP160	chr11:47864539(-) A-I intron -    22327324 chr11:47845038(-) A-G intron -    22484847 chr11:47860952(-) A-G intron -    22484847 chr11:47812244(-) A-G intron -    22484847 chr11:47812300(-) A-G intron -    22484847 chr11:47812975(-) A-G intron -    22484847 chr11:47838652(-) A-G intron -    22484847 chr11:47845968(-) A-G intron -    22484847 chr11:47848869(-) A-G intron -    22484847 chr11:47863378(-) A-G intron -    22484847 chr11:47864464(-) A-G intron -    22484847 chr11:47864539(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NUP160	chr11:47800493-47800494(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr11:47800520-47800521(-) Am 3'UTR       - chr11:47800589-47800590(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr11:47800603-47800604(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr11:47800610-47800611(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr11:47800664-47800665(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr11:47800714-47800715(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr11:47801919-47801920(-) m6A CDS//intron       24284625//24209618//24981863//22608085 chr11:47819793-47819794(-) Y CDS       26075521 chr11:47833886-47833887(-) m6A 3'UTR//CDS       22575960 chr11:47833914-47833915(-) m6A 3'UTR//CDS       22575960 chr11:47833933-47833934(-) m6A 3'UTR//CDS       22575960 chr11:47833950-47833951(-) m6A 3'UTR//CDS       22575960 chr11:47844687-47844688(-) Y intron       16381836 chr11:47861075-47861076(-) m6A 3'UTR//intron       27773535 chr11:47861081-47861082(-) m6A 3'UTR//intron       27773535 chr11:47861173-47861174(-) m6A 3'UTR//intron       24284625//27773535 chr11:47861184-47861185(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr11:47861192-47861193(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr11:47861220-47861221(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr11:47861286-47861287(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr11:47861337-47861338(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr11:47861358-47861359(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr11:47861381-47861382(-) m6A 3'UTR//intron       24284625//27773535 chr11:47869508-47869509(-) m6A CDS//exon       24209618//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NUP160	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-5p
Interactor2: NUP160

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg