Basic Information:

  VIRBase ID:  

VHID00496195

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-5-5p:  MIMAT0015218          PLPP3:  NM_003713     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-5-5p	PLPP3
miRBase Accession/Entrez ID	MIMAT0015218	8613
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Dri42//LPP3//PAP2B//PPAP2B//VCIP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLPP3	chr1:57040110(-) A-I      intronic chr1:57040092(-) A-I      intronic chr1:57040097(-) A-I      intronic chr1:57040178(-) A-I      intronic chr1:57039790(-) A-I      intronic chr1:57039745(-) A-I      intronic chr1:57040091(-) A-I      intronic chr1:57040180(-) A-I      intronic chr1:57039680(-) A-I      intronic chr1:57040201(-) A-I      intronic chr1:57040155(-) A-I      intronic chr1:57039681(-) A-I      intronic chr1:57039690(-) A-I      intronic chr1:57039701(-) A-I      intronic chr1:57039707(-) A-I      intronic chr1:57039725(-) A-I      intronic chr1:57039729(-) A-I      intronic chr1:57040141(-) A-I      intronic chr1:57008545(-) A-I      intronic chr1:56984441(-) A-I      intronic chr1:56969934(-) A-I      intronic chr1:56969717(-) A-I      intronic chr1:56969711(-) A-I      intronic chr1:57008546(-) A-I      intronic chr1:56966494(-) A-I      intronic chr1:57022504(-) A-I      intronic chr1:56969662(-) A-I      intronic chr1:56969560(-) A-I      intronic chr1:56969559(-) A-I      intronic chr1:56969217(-) A-I      intronic chr1:56966576(-) A-I      intronic chr1:57035117(-) A-I      intronic chr1:57040174(-) A-I      intronic chr1:57040131(-) A-I      intronic chr1:57040104(-) A-I      intronic chr1:57040103(-) A-I      intronic chr1:57039870(-) A-I      intronic chr1:57034983(-) A-I      intronic chr1:57027584(-) A-I      intronic chr1:57026649(-) A-I      intronic chr1:57026648(-) A-I      intronic chr1:57039630(-) A-I      intronic chr1:57026622(-) A-I      intronic chr1:57026573(-) A-I      intronic chr1:57026558(-) A-I      intronic chr1:57026541(-) A-I      intronic chr1:57025204(-) A-I      intronic chr1:57022551(-) A-I      intronic chr1:57022512(-) A-I      intronic chr1:57021428(-) A-I      intronic chr1:57039851(-) A-I      intronic chr1:57026563(-) A-I      intronic chr1:57039618(-) A-I      intronic chr1:57035124(-) A-I      intronic chr1:57035118(-) A-I      intronic chr1:57026639(-) A-I      intronic chr1:57027541(-) A-I      intronic chr1:56969261(-) A-I      intronic chr1:57039710(-) A-I      intronic chr1:57039842(-) A-I      intronic chr1:57027672(-) A-I      intronic chr1:57040066(-) A-I      intronic chr1:57021456(-) A-I      intronic chr1:56969663(-) A-I      intronic chr1:57040200(-) A-I      intronic chr1:57039834(-) A-I      intronic chr1:56978049(-) A-I      ncRNA chr1:56978092(-) A-I      ncRNA chr1:56969212(-) A-I      intronic chr1:56964484(-) A-I      intronic chr1:56986301(-) A-I      intronic chr1:57022474(-) A-I      intronic chr1:57040234(-) A-I      intronic chr1:56969556(-) A-I      intronic chr1:56966432(-) A-I      intronic chr1:56969338(-) A-I      intronic chr1:56969703(-) A-I      intronic chr1:57027442(-) A-I      intronic chr1:57020032(-) A-I      intronic chr1:57039685(-) A-I      intronic chr1:56969554(-) A-I      intronic chr1:56969634(-) A-I      intronic chr1:56969482(-) A-I      intronic chr1:57022531(-) A-I      intronic chr1:56969118(-) A-I      intronic chr1:57027586(-) A-I      intronic chr1:57019989(-) A-I      intronic chr1:56969117(-) A-I      intronic chr1:56964483(-) A-I      intronic chr1:57027542(-) A-I      intronic chr1:56987320(-) A-I      intronic chr1:57031367(-) A-I      intronic chr1:56969954(-) A-I      intronic chr1:56969116(-) A-I      intronic chr1:57031383(-) A-I      intronic chr1:57039749(-) A-I      intronic chr1:57022477(-) A-I      intronic chr1:57021401(-) A-I      intronic chr1:57040020(-) A-I      intronic chr1:57026792(-) A-I      intronic chr1:56969619(-) A-I      intronic chr1:57040127(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLPP3	chr1:56962125-56962126(-) m6A 3'UTR//exon       24981863//27773535//22608085 chr1:56962145-56962146(-) m6A 3'UTR//exon       24981863//27773535//22608085 chr1:56962244-56962245(-) m6A CDS//exon       24981863//26404942//27773535//22608085 chr1:56962259-56962260(-) m6A CDS//exon       24981863//26404942//27773535//22608085 chr1:56962320-56962321(-) m6A CDS//exon       24209618//24981863//26404942//27773535 chr1:56977714-56977715(-) m6A CDS//exon       27773535 chr1:56977731-56977732(-) m6A CDS//exon       27773535 chr1:57002679-57002680(-) m6A CDS//exon       27773535 chr1:57002688-57002689(-) m6A CDS//exon       27773535 chr1:57002757-57002758(-) m6A CDS//exon       27773535 chr1:57044681-57044682(-) m6A CDS//intron       27773536 chr1:57044872-57044873(-) m6A 5'UTR//exon//intron       25456834//24981863//26404942//27371828//27773536//22608085 chr1:57044930-57044931(-) m6A 5'UTR//exon//intron       25456834//24981863//26404942//27371828//27773536//22608085 chr1:57045071-57045072(-) m6A 5'UTR//exon//intron       25456834//24981863//27773536//22608085 chr1:57045226-57045227(-) m6A 5'UTR//exon//intron       24981863 chr1:57045230-57045231(-) m6A 5'UTR//exon//intron       27773535 chr1:57109157-57109158(-) m6A exon//intron       27773535 chr1:57109209-57109210(-) m6A exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLPP3	Exosome Blood     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-5-5p
Interactor2: PLPP3

Evidence Support:

Prediction-Evidence	PITA//RNAHybrid
Support Database	VmiReg