Basic Information:

  VIRBase ID:  

VHID00495407

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-5p:  MIMAT0015217          FBXL16:  NM_153350     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-5p	FBXL16
miRBase Accession/Entrez ID	MIMAT0015217	146330
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C16orf22//c380A1.1//Fbl16

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FBXL16	chr16:747888(-) A-I      intronic chr16:748790(-) A-I      intronic chr16:748831(-) A-I      intronic chr16:748658(-) A-I      intronic chr16:748832(-) A-I      intronic chr16:748276(-) A-I      intronic chr16:753917(-) A-I      intronic chr16:747876(-) A-I      intronic chr16:747742(-) A-I      intronic chr16:748722(-) A-I      intronic chr16:748734(-) A-I      intronic chr16:748731(-) A-I      intronic chr16:748748(-) A-I      intronic chr16:748743(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FBXL16	chr16:742870-742871(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828 chr16:742985-742986(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828 chr16:743044-743045(-) m6A 3'UTR//exon       24284625 chr16:743104-743105(-) m6A 3'UTR//exon       24284625 chr16:743151-743152(-) m6A 3'UTR//exon       24284625 chr16:743223-743224(-) m6A 3'UTR//exon       24284625 chr16:743291-743292(-) m6A 3'UTR//exon       24284625 chr16:743575-743576(-) m6A 3'UTR//exon       24284625 chr16:743710-743711(-) m6A 3'UTR//exon       24284625//24209618//27371828 chr16:743792-743793(-) m6A 3'UTR//exon       24284625 chr16:743895-743896(-) m6A 3'UTR//exon       24284625//27371828 chr16:744030-744031(-) m6A 3'UTR//exon       27371828 chr16:745230-745231(-) m6A exon//intron       25456834 chr16:745251-745252(-) m6A exon//intron       25456834 chr16:745259-745260(-) m6A exon//intron       25456834 chr16:745525-745526(-) m6A CDS//exon       24284625//22575960 chr16:745711-745712(-) m6A CDS       24284625//25456834//27371828//22575960 chr16:745911-745912(-) m6A CDS       27371828 chr16:747274-747275(-) m6A CDS       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FBXL16	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-5p
Interactor2: FBXL16

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg