Basic Information:

  VIRBase ID:  

VHID00494455

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-7-5p:  MIMAT0015217          OPRD1:  NM_000911     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-7-5p	OPRD1
miRBase Accession/Entrez ID	MIMAT0015217	4985
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DOP//DOR//DOR1//OPRD

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	OPRD1	chr1:29188069(+) A-I      intronic chr1:29155101(+) A-I      intronic chr1:29180371(+) A-I      intronic chr1:29157871(+) A-I      intronic chr1:29177154(+) A-I      intronic chr1:29186842(+) A-I      intronic chr1:29156351(+) A-I      intronic chr1:29186622(+) A-I      intronic chr1:29154274(+) A-I      intronic chr1:29141654(+) A-I      intronic chr1:29147105(+) A-I      intronic chr1:29150129(+) A-I      intronic chr1:29186605(+) A-I      intronic chr1:29188218(+) A-I      intronic chr1:29162876(+) A-I      intronic chr1:29188563(+) A-I      intronic chr1:29150225(+) A-I      intronic chr1:29179310(+) A-I      intronic chr1:29149809(+) A-I      intronic chr1:29166883(+) A-I      intronic chr1:29158196(+) A-I      intronic chr1:29169302(+) A-I      intronic chr1:29147084(+) A-I      intronic chr1:29188690(+) A-I      intronic chr1:29160488(+) A-I      intronic chr1:29188553(+) A-I      intronic chr1:29147251(+) A-I      intronic chr1:29147269(+) A-I      intronic chr1:29171814(+) A-I      intronic chr1:29186832(+) A-I      intronic chr1:29166835(+) A-I      intronic chr1:29186727(+) A-I      intronic chr1:29188703(+) A-I      intronic chr1:29162865(+) A-I      intronic chr1:29188636(+) A-I      intronic chr1:29186701(+) A-I      intronic chr1:29168703(+) A-I      intronic chr1:29162866(+) A-I      intronic chr1:29150641(+) A-I      intronic chr1:29150091(+) A-I      intronic chr1:29178128(+) A-I      intronic chr1:29158169(+) A-I      intronic chr1:29148643(+) A-I      intronic chr1:29180353(+) A-I      intronic chr1:29150531(+) A-I      intronic chr1:29157870(+) A-I      intronic chr1:29166829(+) A-I      intronic chr1:29145733(+) A-I      intronic chr1:29153971(+) A-I      intronic chr1:29164067(+) A-I      intronic chr1:29149835(+) A-I      intronic chr1:29156780(+) A-I      intronic chr1:29171878(+) A-I      intronic chr1:29146967(+) A-I      intronic chr1:29178110(+) A-I      intronic chr1:29145353(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	OPRD1	chr1:29189433-29189434(+) m6A CDS//intron       25456834 chr1:29189538-29189539(+) m6A CDS       25456834 chr1:29189646-29189647(+) m6A CDS       25456834 chr1:29189910-29189911(+) m6A 3'UTR       25456834 chr1:29189943-29189944(+) m6A 3'UTR       25456834//22608085 chr1:29189997-29189998(+) m6A 3'UTR       25456834//22608085 chr1:29190088-29190089(+) m6A 3'UTR       25456834//22608085 chr1:29190116-29190117(+) m6A 3'UTR       25456834//22608085 chr1:29190154-29190155(+) m6A 3'UTR       25456834//22608085 chr1:29190182-29190183(+) m6A 3'UTR       25456834//22608085 chr1:29196136-29196137(+) m6A 3'UTR       - chr1:29196264-29196265(+) m6A 3'UTR       - chr1:29197169-29197170(+) m6A 3'UTR       - chr1:29197222-29197223(+) m6A 3'UTR       25456834 chr1:29197237-29197238(+) m6A 3'UTR       25456834 chr1:29197252-29197253(+) m6A 3'UTR       25456834 chr1:29197513-29197514(+) m6A 3'UTR       25456834 chr1:29197519-29197520(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	OPRD1	Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-7-5p
Interactor2: OPRD1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg