Basic Information:

  VIRBase ID:  

VHID00494018

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:  MIMAT0015216          PEAR1:  NM_001353682     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-5p	PEAR1
miRBase Accession/Entrez ID	MIMAT0015216	375033
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	JEDI//MEGF12

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PEAR1	chr1:156879517(+) A-I      intronic chr1:156871298(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PEAR1	chr1:156863536-156863537(+) m6A 5'UTR       - chr1:156863578-156863579(+) m6A 5'UTR       - chr1:156883817-156883818(+) m6A CDS//exon       - chr1:156883853-156883854(+) m6A CDS//exon       24981863 chr1:156884444-156884445(+) m6A CDS//exon       24209618//24981863 chr1:156884510-156884511(+) m6A CDS//exon       24209618//24981863//22575960 chr1:156884526-156884527(+) m6A CDS//exon       24209618//24981863//22575960 chr1:156884582-156884583(+) m6A CDS//exon       24209618//25456834//24981863//22575960 chr1:156884649-156884650(+) m6A 3'UTR//exon       24209618//25456834//24981863//22575960 chr1:156884687-156884688(+) m6A 3'UTR//exon       24209618//25456834//24981863 chr1:156884702-156884703(+) m6A 3'UTR//exon       24209618//25456834//24981863 chr1:156884708-156884709(+) m6A 3'UTR//exon       24209618//25456834//24981863 chr1:156884839-156884840(+) m6A 3'UTR//exon       24981863 chr1:156884878-156884879(+) m6A 3'UTR//exon       24981863 chr1:156885233-156885234(+) m6A 3'UTR//exon       - chr1:156885311-156885312(+) m6A 3'UTR//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PEAR1	Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-5p
Interactor2: PEAR1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg