Basic Information:

  VIRBase ID:  

VHID00493658

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:  MIMAT0015216          ZNF362:  NM_001370212     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-5p	ZNF362
miRBase Accession/Entrez ID	MIMAT0015216	149076
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	lin-29//RN

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF362	chr1:33754363(+) A-I      intronic chr1:33763863(+) A-I      intronic chr1:33763830(+) A-I      intronic chr1:33748752(+) A-I      intronic chr1:33763876(+) A-I      intronic chr1:33748845(+) A-I      intronic chr1:33762471(+) A-I      intronic chr1:33736182(+) A-I      NonSyn:Arg->Gly chr1:33763955(+) A-I      intronic chr1:33748754(+) A-I      intronic chr1:33736958(+) A-I      intronic chr1:33763817(+) A-I      intronic chr1:33748809(+) A-I      intronic chr1:33735890(+) A-I      intronic chr1:33728010(+) A-I      intronic chr1:33748835(+) A-I      intronic chr1:33735889(+) A-I      intronic chr1:33731941(+) A-I      intronic chr1:33736134(+) A-I      5'UTR chr1:33763820(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF362	chr1:33745744-33745745(+) m6A CDS       24284625 chr1:33745895-33745896(+) m6A CDS       24284625//25456834 chr1:33745906-33745907(+) m6A CDS       24284625//25456834 chr1:33747501-33747502(+) m6A exon//intron       24284625//24981863 chr1:33747546-33747547(+) m6A exon//intron       - chr1:33760555-33760556(+) m6A CDS       - chr1:33760772-33760773(+) m6A CDS       - chr1:33764685-33764686(+) m6A 3'UTR       24284625//25456834 chr1:33764691-33764692(+) m6A 3'UTR       24284625//25456834//24981863 chr1:33764737-33764738(+) m6A 3'UTR       24284625//25456834//24981863 chr1:33764842-33764843(+) m6A 3'UTR       24284625//25456834//24981863 chr1:33764884-33764885(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:33765022-33765023(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:33765044-33765045(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:33765061-33765062(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:33765079-33765080(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:33765135-33765136(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:33765147-33765148(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:33765300-33765301(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr1:33765367-33765368(+) m6A 3'UTR       24209618//25456834//24981863 chr1:33765394-33765395(+) m6A 3'UTR       24209618//25456834//24981863 chr1:33765427-33765428(+) m6A 3'UTR       24209618//25456834//24981863 chr1:33765457-33765458(+) m6A 3'UTR       24209618//25456834//24981863 chr1:33765500-33765501(+) m6A 3'UTR       24209618//25456834 chr1:33765645-33765646(+) m6A 3'UTR       24284625 chr1:33765667-33765668(+) m6A 3'UTR       24284625 chr1:33765710-33765711(+) m6A 3'UTR       24284625//24981863 chr1:33765764-33765765(+) m6A 3'UTR       24981863 chr1:33765769-33765770(+) m6A 3'UTR       24981863 chr1:33765775-33765776(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF362	Exosome Blood     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-5p
Interactor2: ZNF362

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg