Basic Information:

  VIRBase ID:  

VHID00493443

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:  MIMAT0015216          GBP5:  NM_052942     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-5p	GBP5
miRBase Accession/Entrez ID	MIMAT0015216	115362
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GBP-5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GBP5	chr1:89724884-89724885(-) m6A exon       26404942//27773535 chr1:89724900-89724901(-) m6A exon       26404942//27773535 chr1:89725088-89725089(-) m6A exon       27773535 chr1:89725120-89725121(-) m6A exon       27773535 chr1:89725163-89725164(-) m6A exon       27773535 chr1:89725741-89725742(-) m6A exon       27773535 chr1:89725805-89725806(-) m6A exon       27773535 chr1:89725812-89725813(-) m6A exon       27773535 chr1:89725821-89725822(-) m6A exon       27773535 chr1:89725862-89725863(-) m6A exon       27773535 chr1:89725874-89725875(-) m6A exon       27773535 chr1:89726152-89726153(-) m6A exon       27773535 chr1:89726268-89726269(-) m6A 3'UTR//exon       27773535 chr1:89726289-89726290(-) m6A 3'UTR//exon       27773535 chr1:89726308-89726309(-) m6A 3'UTR//exon       27773535 chr1:89726316-89726317(-) m6A 3'UTR//exon       27773535 chr1:89726323-89726324(-) m6A 3'UTR//exon       27773535 chr1:89726421-89726422(-) m6A CDS//exon       27773535//22575960 chr1:89726497-89726498(-) m6A CDS//exon       28052920//27773535//27371828 chr1:89727914-89727915(-) m6A CDS//exon//intron       27773535//27371828 chr1:89727950-89727951(-) m6A CDS//exon//intron       28052920//27773535//27371828 chr1:89727968-89727969(-) m6A CDS//exon//intron       28052920//27773535//27371828 chr1:89727977-89727978(-) m6A CDS//exon//intron       28052920//27773535//27371828 chr1:89727989-89727990(-) m6A CDS//exon//intron       28052920//27773535//27371828 chr1:89728148-89728149(-) m6A exon//intron       27773535//27371828 chr1:89728158-89728159(-) m6A exon//intron       27773535//27371828 chr1:89728191-89728192(-) m6A exon//intron       27773535//27371828 chr1:89728280-89728281(-) m6A exon//intron       27371828 chr1:89728404-89728405(-) m6A CDS//exon//intron       - chr1:89738128-89738129(-) m6A 5'UTR       27773535 chr1:89738138-89738139(-) m6A 5'UTR       27773535 chr1:89738153-89738154(-) m6A 5'UTR       27773535 chr1:89738160-89738161(-) m6A 5'UTR       27773535 chr1:89738211-89738212(-) m6A 5'UTR       27773535 chr1:89738235-89738236(-) m6A 5'UTR       27773535 chr1:89738251-89738252(-) m6A 5'UTR       27773535 chr1:89738261-89738262(-) m6A 5'UTR       27773535 chr1:89738268-89738269(-) m6A 5'UTR       27773535 chr1:89738286-89738287(-) m6A 5'UTR       27773535 chr1:89738293-89738294(-) m6A 5'UTR       27773535 chr1:89738373-89738374(-) m6A 5'UTR       27773535 chr1:89738387-89738388(-) m6A 5'UTR       27773535 chr1:89738394-89738395(-) m6A 5'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GBP5	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-5p
Interactor2: GBP5

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg