Detail Information

Basic Information:


  VIRBase ID:  

VHID00493430

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:           PNMA5:      

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Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-8-5p PNMA5
miRBase
Accession/Entrez ID
MIMAT0015216 114824
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PNMA5
chrX:152157781-152157782(-) m6A 3'UTR       -
chrX:152158383-152158384(-) m6A 3'UTR       -
chrX:152158425-152158426(-) m6A 3'UTR       -
chrX:152158450-152158451(-) m6A 3'UTR       -
chrX:152158509-152158510(-) m6A 3'UTR       -
chrX:152158552-152158553(-) m6A 3'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PNMA5
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-8-5p
Interactor2: PNMA5

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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