Detail Information

Basic Information:


  VIRBase ID:  

VHID00493361

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:           ZNF585B:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-8-5p ZNF585B
miRBase
Accession/Entrez ID		 MIMAT0015216 92285
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - SZFP41//Zfp27

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF585B
chr19:37700196(-) A-I      intronic
chr19:37694565(-) A-I      intronic
chr19:37693010(-) A-I      intronic
chr19:37693026(-) A-I      intronic
chr19:37700218(-) A-I      intronic
chr19:37673313(-) A-I      3'UTR
chr19:37700183(-) A-I      intronic
chr19:37700221(-) A-I      intronic
chr19:37700175(-) A-I      intronic
chr19:37694598(-) A-I      intronic
chr19:37693023(-) A-I      intronic
chr19:37694568(-) A-I      intronic
chr19:37690315(-) A-I      intronic
chr19:37690365(-) A-I      intronic
chr19:37690370(-) A-I      intronic
chr19:37690423(-) A-I      intronic
chr19:37691317(-) A-I      intronic
chr19:37691369(-) A-I      intronic
chr19:37691954(-) A-I      intronic
chr19:37693014(-) A-I      intronic
chr19:37693020(-) A-I      intronic
chr19:37693029(-) A-I      intronic
chr19:37693045(-) A-I      intronic
chr19:37693069(-) A-I      intronic
chr19:37693103(-) A-I      intronic
chr19:37693673(-) A-I      intronic
chr19:37693708(-) A-I      intronic
chr19:37694330(-) A-I      intronic
chr19:37694338(-) A-I      intronic
chr19:37694375(-) A-I      intronic
chr19:37694591(-) A-I      intronic
chr19:37694603(-) A-I      intronic
chr19:37694668(-) A-I      intronic
chr19:37695734(-) A-I      intronic
chr19:37695787(-) A-I      intronic
chr19:37695858(-) A-I      intronic
chr19:37695863(-) A-I      intronic
chr19:37695877(-) A-I      intronic
chr19:37698986(-) A-I      intronic
chr19:37698996(-) A-I      intronic
chr19:37699093(-) A-I      intronic
chr19:37699702(-) A-I      intronic
chr19:37699722(-) A-I      intronic
chr19:37700112(-) A-I      intronic
chr19:37700223(-) A-I      intronic
chr19:37700782(-) A-I      intronic
chr19:37700789(-) A-I      intronic
chr19:37700792(-) A-I      intronic
chr19:37700794(-) A-I      intronic
chr19:37700812(-) A-I      intronic
chr19:37703323(-) A-I      intronic
chr19:37707908(-) A-I      intronic
chr19:37700822(-) A-I      intronic
chr19:37689592(-) A-I      intronic
chr19:37681530(-) A-I      intronic
chr19:37681646(-) A-I      intronic
chr19:37681661(-) A-I      intronic
chr19:37682328(-) A-I      intronic
chr19:37682408(-) A-I      intronic
chr19:37682410(-) A-I      intronic
chr19:37682463(-) A-I      intronic
chr19:37682762(-) A-I      intronic
chr19:37682768(-) A-I      intronic
chr19:37682888(-) A-I      intronic
chr19:37689103(-) A-I      intronic
chr19:37689146(-) A-I      intronic
chr19:37689243(-) A-I      intronic
chr19:37689253(-) A-I      intronic
chr19:37689275(-) A-I      intronic
chr19:37689281(-) A-I      intronic
chr19:37689290(-) A-I      intronic
chr19:37689298(-) A-I      intronic
chr19:37689341(-) A-I      intronic
chr19:37689346(-) A-I      intronic
chr19:37689416(-) A-I      intronic
chr19:37689472(-) A-I      intronic
chr19:37689475(-) A-I      intronic
chr19:37689526(-) A-I      intronic
chr19:37689538(-) A-I      intronic
chr19:37689556(-) A-I      intronic
chr19:37689591(-) A-I      intronic
chr19:37690184(-) A-I      intronic
chr19:37690207(-) A-I      intronic
chr19:37690241(-) A-I      intronic
chr19:37690246(-) A-I      intronic
chr19:37690249(-) A-I      intronic
chr19:37681200(-) A-I      5'UTR
chr19:37681321(-) A-I      5'UTR
chr19:37690172(-) A-I      intronic
chr19:37705906(-) A-I      intronic
chr19:37693180(-) A-I      intronic
chr19:37685312(-) A-I      intronic
chr19:37689329(-) A-I      intronic
chr19:37696819(-) A-I      intronic
chr19:37689136(-) A-I      intronic
chr19:37689302(-) A-I      intronic
chr19:37691340(-) A-I      intronic
chr19:37681650(-) A-I      intronic
chr19:37694300(-) A-I      intronic
chr19:37684560(-) A-I      intronic
chr19:37685353(-) A-I      intronic
chr19:37690318(-) A-I      intronic
chr19:37693108(-) A-I      intronic
chr19:37699782(-) A-I      intronic
chr19:37690327(-) A-I      intronic
chr19:37689446(-) A-I      intronic
chr19:37694593(-) A-I      intronic
chr19:37707727(-) A-I      intronic
chr19:37696900(-) A-I      intronic
chr19:37694729(-) A-I      intronic
chr19:37699888(-) A-I      intronic
chr19:37682771(-) A-I      intronic
chr19:37699847(-) A-I      intronic
chr19:37690208(-) A-I      intronic
chr19:37689202(-) A-I      intronic
chr19:37696834(-) A-I      intronic
chr19:37695822(-) A-I      intronic
chr19:37699054(-) A-I      intronic
chr19:37690211(-) A-I      intronic
chr19:37696724(-) A-I      intronic
chr19:37699811(-) A-I      intronic
chr19:37694299(-) A-I      intronic
chr19:37689268(-) A-I      intronic
chr19:37679276(-) A-I      intronic
chr19:37699053(-) A-I      intronic
chr19:37699832(-) A-I      intronic
chr19:37695809(-) A-I      intronic
chr19:37700890(-) A-I      intronic
chr19:37696825(-) A-I      intronic
chr19:37689128(-) A-I      intronic
chr19:37699689(-) A-I      intronic
chr19:37681220(-) A-I      5'UTR
chr19:37699013(-) A-I      intronic
chr19:37682356(-) A-I      intronic
chr19:37693790(-) A-I      intronic
chr19:37699083(-) A-I      intronic
chr19:37681739(-) A-I      intronic
chr19:37694628(-) A-I      intronic
chr19:37694797(-) A-I      intronic
chr19:37699676(-) A-I      intronic
chr19:37681721(-) A-I      intronic
chr19:37693172(-) A-I      intronic
chr19:37700889(-) A-I      intronic
chr19:37689238(-) A-I      intronic
chr19:37681285(-) A-I      5'UTR
chr19:37707420(-) A-I      intronic
chr19:37707356(-) A-I      intronic
chr19:37700185(-) A-I      intronic
chr19:37689220(-) A-I      intronic
chr19:37692949(-) A-I      intronic
chr19:37707299(-) A-I      intronic
chr19:37682398(-) A-I      intronic
chr19:37707282(-) A-I      intronic
chr19:37695828(-) A-I      intronic
chr19:37682444(-) A-I      intronic
chr19:37694282(-) A-I      intronic
chr19:37700182(-) A-I      intronic
chr19:37699145(-) A-I      intronic
chr19:37707316(-) A-I      intronic
chr19:37695568(-) A-I      intronic
chr19:37696943(-) A-I      intronic
chr19:37707724(-) A-I      intronic
chr19:37682354(-) A-I      intronic
chr19:37695513(-) A-I      intronic
chr19:37700184(-) A-I      intronic
chr19:37700138(-) A-I      intronic
chr19:37697191(-) A-I      intronic
chr19:37681221(-) A-I      5'UTR
chr19:37695786(-) A-I      intronic
chr19:37693098(-) A-I      intronic
chr19:37695641(-) A-I      intronic
chr19:37693142(-) A-I      intronic
chr19:37700144(-) A-I      intronic
chr19:37682832(-) A-I      intronic
chr19:37682443(-) A-I      intronic
chr19:37681215(-) A-I      5'UTR
chr19:37690194(-) A-I      intronic
chr19:37690381(-) A-I      intronic
chr19:37693054(-) A-I      intronic
chr19:37699003(-) A-I      intronic
chr19:37690183(-) A-I      intronic
chr19:37682468(-) A-I      intronic
chr19:37690237(-) A-I      intronic
chr19:37681253(-) A-I      5'UTR
chr19:37681259(-) A-I      5'UTR
chr19:37690178(-) A-I      intronic
chr19:37707360(-) A-I      intronic
chr19:37700074(-) A-I      intronic
chr19:37707856(-) A-I      intronic
chr19:37698980(-) A-I      intronic
chr19:37707450(-) A-I      intronic
chr19:37689230(-) A-I      intronic
chr19:37695929(-) A-I      intronic
chr19:37695823(-) A-I      intronic
chr19:37684435(-) A-I      intronic
chr19:37699021(-) A-I      intronic
chr19:37700201(-) A-I      intronic
chr19:37695555(-) A-I      intronic
chr19:37694356(-) A-I      intronic
chr19:37681312(-) A-I      5'UTR
chr19:37699756(-) A-I      intronic
chr19:37699076(-) A-I      intronic
chr19:37699812(-) A-I      intronic
chr19:37690412(-) A-I      intronic
chr19:37693776(-) A-I      intronic
chr19:37685393(-) A-I      intronic
chr19:37695832(-) A-I      intronic
chr19:37707869(-) A-I      intronic
chr19:37695853(-) A-I      intronic
chr19:37700145(-) A-I      intronic
chr19:37693796(-) A-I      intronic
chr19:37690261(-) A-I      intronic
chr19:37694627(-) A-I      intronic
chr19:37700103(-) A-I      intronic
chr19:37690332(-) A-I      intronic
chr19:37682870(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZNF585B
chr19:37681215(-) A-I intron -    15342557   //15258596
chr19:37681216(-) A-I intron -    15342557   //15258596
chr19:37681220(-) A-I intron -    15342557   //15258596
chr19:37681221(-) A-I intron -    15342557   //15258596
chr19:37681253(-) A-I intron -    15342557
chr19:37681259(-) A-I intron -    15342557
chr19:37681272(-) A-I intron -    15342557
chr19:37681285(-) A-I intron -    15342557
chr19:37681312(-) A-I intron -    15342557
chr19:37684560(-) A-G intron -    22484847
chr19:37689128(-) A-G intron -    22484847
chr19:37690208(-) A-G intron -    22484847
chr19:37690237(-) A-G intron -    22484847
chr19:37694299(-) A-G intron -    22484847
chr19:37699013(-) A-G intron -    22484847
chr19:37699021(-) A-G intron -    22484847
chr19:37700177(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF585B
chr19:37675898-37675899(-) m6A 3'UTR       22608085
chr19:37675928-37675929(-) m6A 3'UTR       22608085
chr19:37675959-37675960(-) m6A 3'UTR       22608085
chr19:37676109-37676110(-) m6A 3'UTR       22608085
chr19:37676122-37676123(-) m6A 3'UTR       22608085
chr19:37676210-37676211(-) m6A 3'UTR//CDS       24981863//22608085
chr19:37676226-37676227(-) m6A 3'UTR//CDS       24981863//22608085
chr19:37676233-37676234(-) m6A 3'UTR//CDS       24981863//22608085
chr19:37676794-37676795(-) m6A 3'UTR//CDS       22608085
chr19:37676915-37676916(-) m6A 3'UTR//CDS       22608085
chr19:37676979-37676980(-) m6A 3'UTR//CDS       22608085
chr19:37677130-37677131(-) m6A 3'UTR//CDS       24981863//22608085
chr19:37677190-37677191(-) m6A 3'UTR//CDS       24981863//22608085
chr19:37677298-37677299(-) m6A 3'UTR//CDS       22608085
chr19:37677550-37677551(-) m6A 3'UTR//CDS       22608085
chr19:37677591-37677592(-) m6A 3'UTR//CDS       24981863//22608085
chr19:37677718-37677719(-) m6A 3'UTR//CDS       24981863//22608085
chr19:37677802-37677803(-) m6A CDS       24981863//22608085
chr19:37677903-37677904(-) m6A CDS//intron       24981863//22608085
chr19:37677970-37677971(-) m6A CDS//intron       24981863//22608085
chr19:37678096-37678097(-) m6A CDS       22608085
chr19:37678130-37678131(-) m6A CDS       22608085
chr19:37701386-37701387(-) m6A 5'UTR//intron       24981863
chr19:37708620-37708621(-) m6A exon       22608085
chr19:37708658-37708659(-) m6A exon       22608085
chr19:37708665-37708666(-) m6A exon       22608085
chr19:37708768-37708769(-) m6A exon       25456834//22608085
chr19:37708828-37708829(-) m6A exon       25456834//22608085
chr19:37708876-37708877(-) m6A exon       25456834//22608085
chr19:37708909-37708910(-) m6A exon       -
chr19:37708927-37708928(-) m6A exon       -
chr19:37708955-37708956(-) m6A exon       -
chr19:37708977-37708978(-) m6A exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF585B
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-8-5p
Interactor2: ZNF585B

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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