Basic Information:

  VIRBase ID:  

VHID00493300

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:  MIMAT0015216          GAL3ST3:  NM_033036     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-5p	GAL3ST3
miRBase Accession/Entrez ID	MIMAT0015216	89792
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GAL3ST-3//GAL3ST2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GAL3ST3	chr11:65809697-65809698(-) m6A 3'UTR       25456834 chr11:65809802-65809803(-) m6A 3'UTR       25456834 chr11:65809853-65809854(-) m6A 3'UTR       25456834 chr11:65810032-65810033(-) m6A CDS       25456834//24981863 chr11:65810095-65810096(-) m6A CDS       25456834//24981863 chr11:65810185-65810186(-) m6A CDS       25456834//24981863 chr11:65811031-65811032(-) m6A CDS       25456834//24981863 chr11:65811062-65811063(-) m6A CDS       25456834//24981863 chr11:65811106-65811107(-) m6A CDS       25456834//24981863 chr11:65812986-65812987(-) m6A 5'UTR//exon       - chr11:65813020-65813021(-) m6A 5'UTR//intron       - chr11:65816546-65816547(-) m6A 5'UTR//exon       25456834 chr11:65816565-65816566(-) m6A 5'UTR//exon       25456834

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-5p
Interactor2: GAL3ST3

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg