Basic Information:

  VIRBase ID:  

VHID00492602

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6002

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:  MIMAT0015216          NPLOC4:  NR_130139     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-5p	NPLOC4
miRBase Accession/Entrez ID	MIMAT0015216	55666
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NPL4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NPLOC4	chr17:79597386(-) A-I      intronic chr17:79530233(-) A-I      3'UTR chr17:79600872(-) A-I      intronic chr17:79553470(-) A-I      intronic chr17:79600836(-) A-I      intronic chr17:79600814(-) A-I      intronic chr17:79597398(-) A-I      intronic chr17:79528857(-) A-I      3'UTR chr17:79597346(-) A-I      intronic chr17:79589741(-) A-I      intronic chr17:79527584(-) A-I      intronic chr17:79527576(-) A-I      intronic chr17:79599197(-) A-I      intronic chr17:79527565(-) A-I      intronic chr17:79528831(-) A-I      3'UTR chr17:79528833(-) A-I      3'UTR chr17:79526955(-) A-I      intronic chr17:79599196(-) A-I      intronic chr17:79526949(-) A-I      intronic chr17:79599179(-) A-I      intronic chr17:79528819(-) A-I      3'UTR chr17:79528843(-) A-I      3'UTR chr17:79530071(-) A-I      3'UTR chr17:79530519(-) A-I      3'UTR chr17:79530558(-) A-I      3'UTR chr17:79530594(-) A-I      3'UTR chr17:79597390(-) A-I      intronic chr17:79602303(-) A-I      intronic chr17:79603176(-) A-I      intronic chr17:79599567(-) A-I      intronic chr17:79597897(-) A-I      intronic chr17:79597846(-) A-I      intronic chr17:79599139(-) A-I      intronic chr17:79552856(-) A-I      intronic chr17:79552903(-) A-I      intronic chr17:79589634(-) A-I      intronic chr17:79589609(-) A-I      intronic chr17:79552993(-) A-I      intronic chr17:79553009(-) A-I      intronic chr17:79554440(-) A-I      intronic chr17:79554608(-) A-I      intronic chr17:79554613(-) A-I      intronic chr17:79598142(-) A-I      intronic chr17:79598136(-) A-I      intronic chr17:79598117(-) A-I      intronic chr17:79598116(-) A-I      intronic chr17:79598099(-) A-I      intronic chr17:79598077(-) A-I      intronic chr17:79597956(-) A-I      intronic chr17:79597936(-) A-I      intronic chr17:79597748(-) A-I      intronic chr17:79596486(-) A-I      intronic chr17:79596478(-) A-I      intronic chr17:79596447(-) A-I      intronic chr17:79596435(-) A-I      intronic chr17:79596434(-) A-I      intronic chr17:79596356(-) A-I      intronic chr17:79596355(-) A-I      intronic chr17:79596276(-) A-I      intronic chr17:79595525(-) A-I      intronic chr17:79595492(-) A-I      intronic chr17:79595428(-) A-I      intronic chr17:79595418(-) A-I      intronic chr17:79555470(-) A-I      intronic chr17:79557618(-) A-I      intronic chr17:79557592(-) A-I      intronic chr17:79556857(-) A-I      intronic chr17:79555646(-) A-I      intronic chr17:79556821(-) A-I      intronic chr17:79555593(-) A-I      intronic chr17:79590272(-) A-I      intronic chr17:79590193(-) A-I      intronic chr17:79590179(-) A-I      intronic chr17:79590052(-) A-I      intronic chr17:79589781(-) A-I      intronic chr17:79589780(-) A-I      intronic chr17:79589770(-) A-I      intronic chr17:79589765(-) A-I      intronic chr17:79589755(-) A-I      intronic chr17:79589725(-) A-I      intronic chr17:79589715(-) A-I      intronic chr17:79589714(-) A-I      intronic chr17:79589682(-) A-I      intronic chr17:79562738(-) A-I      intronic chr17:79562741(-) A-I      intronic chr17:79562774(-) A-I      intronic chr17:79552588(-) A-I      intronic chr17:79568483(-) A-I      intronic chr17:79569893(-) A-I      intronic chr17:79571933(-) A-I      intronic chr17:79572454(-) A-I      intronic chr17:79573138(-) A-I      intronic chr17:79572502(-) A-I      intronic chr17:79572506(-) A-I      intronic chr17:79572508(-) A-I      intronic chr17:79572628(-) A-I      intronic chr17:79572660(-) A-I      intronic chr17:79572856(-) A-I      intronic chr17:79572971(-) A-I      intronic chr17:79573016(-) A-I      intronic chr17:79573027(-) A-I      intronic chr17:79573030(-) A-I      intronic chr17:79573120(-) A-I      intronic chr17:79573127(-) A-I      intronic chr17:79576184(-) A-I      intronic chr17:79576315(-) A-I      intronic chr17:79577581(-) A-I      intronic chr17:79578089(-) A-I      intronic chr17:79578222(-) A-I      intronic chr17:79602122(-) A-I      intronic chr17:79603110(-) A-I      intronic chr17:79603224(-) A-I      intronic chr17:79613283(-) A-I      intronic chr17:79613296(-) A-I      intronic chr17:79578300(-) A-I      intronic chr17:79555471(-) A-I      intronic chr17:79578333(-) A-I      intronic chr17:79578472(-) A-I      intronic chr17:79578489(-) A-I      intronic chr17:79578497(-) A-I      intronic chr17:79578514(-) A-I      intronic chr17:79578520(-) A-I      intronic chr17:79578536(-) A-I      intronic chr17:79578657(-) A-I      intronic chr17:79578665(-) A-I      intronic chr17:79578789(-) A-I      intronic chr17:79578804(-) A-I      intronic chr17:79590438(-) A-I      intronic chr17:79590712(-) A-I      intronic chr17:79590767(-) A-I      intronic chr17:79591323(-) A-I      intronic chr17:79591431(-) A-I      intronic chr17:79591593(-) A-I      intronic chr17:79593881(-) A-I      intronic chr17:79593994(-) A-I      intronic chr17:79594004(-) A-I      intronic chr17:79594016(-) A-I      intronic chr17:79594114(-) A-I      intronic chr17:79594157(-) A-I      intronic chr17:79552569(-) A-I      intronic chr17:79552564(-) A-I      intronic chr17:79552508(-) A-I      intronic chr17:79552483(-) A-I      intronic chr17:79594160(-) A-I      intronic chr17:79552445(-) A-I      intronic chr17:79549625(-) A-I      intronic chr17:79549520(-) A-I      intronic chr17:79546366(-) A-I      intronic chr17:79546282(-) A-I      intronic chr17:79546039(-) A-I      intronic chr17:79546036(-) A-I      intronic chr17:79539382(-) A-I      intronic chr17:79539347(-) A-I      intronic chr17:79527585(-) A-I      intronic chr17:79527553(-) A-I      intronic chr17:79527541(-) A-I      intronic chr17:79527520(-) A-I      intronic chr17:79527505(-) A-I      intronic chr17:79527476(-) A-I      intronic chr17:79527382(-) A-I      intronic chr17:79527321(-) A-I      intronic chr17:79527252(-) A-I      intronic chr17:79527240(-) A-I      intronic chr17:79527222(-) A-I      intronic chr17:79601782(-) A-I      intronic chr17:79601710(-) A-I      intronic chr17:79601034(-) A-I      intronic chr17:79601028(-) A-I      intronic chr17:79600869(-) A-I      intronic chr17:79600807(-) A-I      intronic chr17:79600096(-) A-I      intronic chr17:79600061(-) A-I      intronic chr17:79600048(-) A-I      intronic chr17:79552723(-) A-I      intronic chr17:79552741(-) A-I      intronic chr17:79552778(-) A-I      intronic chr17:79594198(-) A-I      intronic chr17:79578817(-) A-I      intronic chr17:79578818(-) A-I      intronic chr17:79527185(-) A-I      intronic chr17:79527028(-) A-I      intronic chr17:79526977(-) A-I      intronic chr17:79526919(-) A-I      intronic chr17:79578864(-) A-I      intronic chr17:79557628(-) A-I      intronic chr17:79578877(-) A-I      intronic chr17:79578923(-) A-I      intronic chr17:79581058(-) A-I      intronic chr17:79526905(-) A-I      intronic chr17:79526874(-) A-I      intronic chr17:79526870(-) A-I      intronic chr17:79526856(-) A-I      intronic chr17:79581068(-) A-I      intronic chr17:79582329(-) A-I      intronic chr17:79594296(-) A-I      intronic chr17:79594653(-) A-I      intronic chr17:79594299(-) A-I      intronic chr17:79594306(-) A-I      intronic chr17:79594318(-) A-I      intronic chr17:79597859(-) A-I      intronic chr17:79594509(-) A-I      intronic chr17:79594521(-) A-I      intronic chr17:79594522(-) A-I      intronic chr17:79594603(-) A-I      intronic chr17:79526826(-) A-I      intronic chr17:79526789(-) A-I      intronic chr17:79594643(-) A-I      intronic chr17:79577575(-) A-I      intronic chr17:79595025(-) A-I      intronic chr17:79595125(-) A-I      intronic chr17:79595150(-) A-I      intronic chr17:79595155(-) A-I      intronic chr17:79595203(-) A-I      intronic chr17:79595211(-) A-I      intronic chr17:79595376(-) A-I      intronic chr17:79595392(-) A-I      intronic chr17:79583589(-) A-I      intronic chr17:79583592(-) A-I      intronic chr17:79583644(-) A-I      intronic chr17:79586303(-) A-I      intronic chr17:79586389(-) A-I      intronic chr17:79555575(-) A-I      intronic chr17:79554906(-) A-I      intronic chr17:79554936(-) A-I      intronic chr17:79561932(-) A-I      intronic chr17:79552795(-) A-I      intronic chr17:79552841(-) A-I      intronic chr17:79552847(-) A-I      intronic chr17:79590434(-) A-I      intronic chr17:79562691(-) A-I      intronic chr17:79562708(-) A-I      intronic chr17:79599463(-) A-I      intronic chr17:79599476(-) A-I      intronic chr17:79599477(-) A-I      intronic chr17:79554904(-) A-I      intronic chr17:79599513(-) A-I      intronic chr17:79599518(-) A-I      intronic chr17:79599544(-) A-I      intronic chr17:79599989(-) A-I      intronic chr17:79600032(-) A-I      intronic chr17:79600034(-) A-I      intronic chr17:79600047(-) A-I      intronic chr17:79554833(-) A-I      intronic chr17:79562727(-) A-I      intronic chr17:79557663(-) A-I      intronic chr17:79557661(-) A-I      intronic chr17:79557651(-) A-I      intronic chr17:79552446(-) A-I      intronic chr17:79529080(-) A-I      3'UTR chr17:79529256(-) A-I      3'UTR chr17:79530159(-) A-I      3'UTR chr17:79529103(-) A-I      3'UTR chr17:79530016(-) A-I      3'UTR chr17:79529760(-) A-I      3'UTR chr17:79529747(-) A-I      3'UTR chr17:79529456(-) A-I      3'UTR chr17:79531025(-) A-I      3'UTR chr17:79529427(-) A-I      3'UTR chr17:79529373(-) A-I      3'UTR chr17:79530372(-) A-I      3'UTR chr17:79530539(-) A-I      3'UTR chr17:79530363(-) A-I      3'UTR chr17:79530289(-) A-I      3'UTR chr17:79530280(-) A-I      3'UTR chr17:79530274(-) A-I      3'UTR chr17:79531024(-) A-I      3'UTR chr17:79529421(-) A-I      3'UTR chr17:79530269(-) A-I      3'UTR chr17:79529382(-) A-I      3'UTR chr17:79528896(-) A-I      3'UTR chr17:79527435(-) A-I      intronic chr17:79552505(-) A-I      intronic chr17:79583723(-) A-I      intronic chr17:79553391(-) A-I      intronic chr17:79555512(-) A-I      intronic chr17:79595441(-) A-I      intronic chr17:79526954(-) A-I      intronic chr17:79562699(-) A-I      intronic chr17:79603028(-) A-I      intronic chr17:79561612(-) A-I      intronic chr17:79581191(-) A-I      intronic chr17:79596304(-) A-I      intronic chr17:79562397(-) A-I      intronic chr17:79552576(-) A-I      intronic chr17:79554480(-) A-I      intronic chr17:79527040(-) A-I      intronic chr17:79576221(-) A-I      intronic chr17:79556844(-) A-I      intronic chr17:79534983(-) A-I      intronic chr17:79584534(-) A-I      intronic chr17:79527478(-) A-I      intronic chr17:79546409(-) A-I      intronic chr17:79599205(-) A-I      intronic chr17:79556852(-) A-I      intronic chr17:79555459(-) A-I      intronic chr17:79527200(-) A-I      intronic chr17:79578299(-) A-I      intronic chr17:79554328(-) A-I      intronic chr17:79572591(-) A-I      intronic chr17:79599613(-) A-I      intronic chr17:79552768(-) A-I      intronic chr17:79576142(-) A-I      intronic chr17:79598854(-) A-I      intronic chr17:79526964(-) A-I      intronic chr17:79526937(-) A-I      intronic chr17:79541857(-) A-I      intronic chr17:79561498(-) A-I      intronic chr17:79562606(-) A-I      intronic chr17:79601170(-) A-I      intronic chr17:79527199(-) A-I      intronic chr17:79527545(-) A-I      intronic chr17:79600056(-) A-I      intronic chr17:79553418(-) A-I      intronic chr17:79549628(-) A-I      intronic chr17:79599519(-) A-I      intronic chr17:79526988(-) A-I      intronic chr17:79601273(-) A-I      intronic chr17:79526974(-) A-I      intronic chr17:79526979(-) A-I      intronic chr17:79595424(-) A-I      intronic chr17:79596043(-) A-I      intronic chr17:79558204(-) A-I      intronic chr17:79597539(-) A-I      intronic chr17:79600816(-) A-I      intronic chr17:79616193(-) A-I      intronic chr17:79582191(-) A-I      intronic chr17:79552830(-) A-I      intronic chr17:79526855(-) A-I      intronic chr17:79599612(-) A-I      intronic chr17:79552431(-) A-I      intronic chr17:79546341(-) A-I      intronic chr17:79602161(-) A-I      intronic chr17:79562739(-) A-I      intronic chr17:79527357(-) A-I      intronic chr17:79594227(-) A-I      intronic chr17:79554256(-) A-I      intronic chr17:79546197(-) A-I      intronic chr17:79593772(-) A-I      intronic chr17:79562783(-) A-I      intronic chr17:79582254(-) A-I      intronic chr17:79599992(-) A-I      intronic chr17:79552113(-) A-I      intronic chr17:79600815(-) A-I      intronic chr17:79576239(-) A-I      intronic chr17:79552030(-) A-I      intronic chr17:79583567(-) A-I      intronic chr17:79526939(-) A-I      intronic chr17:79546150(-) A-I      intronic chr17:79599260(-) A-I      intronic chr17:79546318(-) A-I      intronic chr17:79557627(-) A-I      intronic chr17:79572952(-) A-I      intronic chr17:79590372(-) A-I      intronic chr17:79600827(-) A-I      intronic chr17:79591190(-) A-I      intronic chr17:79552485(-) A-I      intronic chr17:79608058(-) A-I      intronic chr17:79557645(-) A-I      intronic chr17:79530737(-) A-I      3'UTR chr17:79596382(-) A-I      intronic chr17:79578960(-) A-I      intronic chr17:79606783(-) A-I      intronic chr17:79527327(-) A-I      intronic chr17:79602111(-) A-I      intronic chr17:79529482(-) A-I      3'UTR chr17:79554265(-) A-I      intronic chr17:79527401(-) A-I      intronic chr17:79531021(-) A-I      3'UTR chr17:79529105(-) A-I      3'UTR chr17:79528849(-) A-I      3'UTR chr17:79530216(-) A-I      3'UTR chr17:79552133(-) A-I      intronic chr17:79529457(-) A-I      3'UTR chr17:79531093(-) A-I      3'UTR chr17:79531020(-) A-I      3'UTR chr17:79597820(-) A-I      intronic chr17:79529094(-) A-I      3'UTR chr17:79601972(-) A-I      intronic chr17:79529169(-) A-I      3'UTR chr17:79600842(-) A-I      intronic chr17:79529068(-) A-I      3'UTR chr17:79586399(-) A-I      intronic chr17:79529043(-) A-I      3'UTR chr17:79530212(-) A-I      3'UTR chr17:79556367(-) A-I      intronic chr17:79552566(-) A-I      intronic chr17:79529841(-) A-I      3'UTR chr17:79529962(-) A-I      3'UTR chr17:79530178(-) A-I      3'UTR chr17:79597476(-) A-I      intronic chr17:79546071(-) A-I      intronic chr17:79597954(-) A-I      intronic chr17:79528862(-) A-I      3'UTR chr17:79603149(-) A-I      intronic chr17:79529799(-) A-I      3'UTR chr17:79570430(-) A-I      intronic chr17:79552932(-) A-I      intronic chr17:79529809(-) A-I      3'UTR chr17:79597795(-) A-I      intronic chr17:79555490(-) A-I      intronic chr17:79530336(-) A-I      3'UTR chr17:79529879(-) A-I      3'UTR chr17:79551942(-) A-I      intronic chr17:79554257(-) A-I      intronic chr17:79602257(-) A-I      intronic chr17:79530738(-) A-I      3'UTR chr17:79529441(-) A-I      3'UTR chr17:79526940(-) A-I      intronic chr17:79529335(-) A-I      3'UTR chr17:79599206(-) A-I      intronic chr17:79529938(-) A-I      3'UTR chr17:79530265(-) A-I      3'UTR chr17:79529773(-) A-I      3'UTR chr17:79589778(-) A-I      intronic chr17:79530278(-) A-I      3'UTR chr17:79601979(-) A-I      intronic chr17:79530761(-) A-I      3'UTR chr17:79530768(-) A-I      3'UTR chr17:79529723(-) A-I      3'UTR chr17:79529882(-) A-I      3'UTR chr17:79552963(-) A-I      intronic chr17:79530194(-) A-I      3'UTR chr17:79530009(-) A-I      3'UTR chr17:79597689(-) A-I      intronic chr17:79597702(-) A-I      intronic chr17:79562194(-) A-I      intronic chr17:79590346(-) A-I      intronic chr17:79546055(-) A-I      intronic chr17:79596297(-) A-I      intronic chr17:79553012(-) A-I      intronic chr17:79546296(-) A-I      intronic chr17:79555499(-) A-I      intronic chr17:79599975(-) A-I      intronic chr17:79530063(-) A-I      3'UTR chr17:79608075(-) A-I      intronic chr17:79599967(-) A-I      intronic chr17:79529471(-) A-I      3'UTR chr17:79529854(-) A-I      3'UTR chr17:79526887(-) A-I      intronic chr17:79529557(-) A-I      3'UTR chr17:79578438(-) A-I      intronic chr17:79578471(-) A-I      intronic chr17:79530527(-) A-I      3'UTR chr17:79529205(-) A-I      3'UTR chr17:79529710(-) A-I      3'UTR chr17:79578720(-) A-I      intronic chr17:79530366(-) A-I      3'UTR chr17:79526915(-) A-I      intronic chr17:79530536(-) A-I      3'UTR chr17:79529539(-) A-I      3'UTR chr17:79530408(-) A-I      3'UTR chr17:79527491(-) A-I      intronic chr17:79529097(-) A-I      3'UTR chr17:79549488(-) A-I      intronic chr17:79529958(-) A-I      3'UTR chr17:79530371(-) A-I      3'UTR chr17:79529883(-) A-I      3'UTR chr17:79530135(-) A-I      3'UTR chr17:79602282(-) A-I      intronic chr17:79541822(-) A-I      intronic chr17:79553377(-) A-I      intronic chr17:79528875(-) A-I      3'UTR chr17:79526865(-) A-I      intronic chr17:79531043(-) A-I      3'UTR chr17:79529844(-) A-I      3'UTR chr17:79530471(-) A-I      3'UTR chr17:79602203(-) A-I      intronic chr17:79528873(-) A-I      3'UTR chr17:79528899(-) A-I      3'UTR chr17:79590058(-) A-I      intronic chr17:79549708(-) A-I      intronic chr17:79554255(-) A-I      intronic chr17:79529360(-) A-I      3'UTR chr17:79546304(-) A-I      intronic chr17:79562667(-) A-I      intronic chr17:79529189(-) A-I      3'UTR chr17:79578964(-) A-I      intronic chr17:79555526(-) A-I      intronic chr17:79531007(-) A-I      3'UTR chr17:79546058(-) A-I      intronic chr17:79595334(-) A-I      intronic chr17:79530268(-) A-I      3'UTR chr17:79529320(-) A-I      3'UTR chr17:79529399(-) A-I      3'UTR chr17:79530319(-) A-I      3'UTR chr17:79529176(-) A-I      3'UTR chr17:79546321(-) A-I      intronic chr17:79581181(-) A-I      intronic chr17:79529880(-) A-I      3'UTR chr17:79527241(-) A-I      intronic chr17:79530206(-) A-I      3'UTR chr17:79529453(-) A-I      3'UTR chr17:79597773(-) A-I      intronic chr17:79554974(-) A-I      intronic chr17:79529158(-) A-I      3'UTR chr17:79553574(-) A-I      intronic chr17:79599543(-) A-I      intronic chr17:79529362(-) A-I      3'UTR chr17:79606398(-) A-I      intronic chr17:79529425(-) A-I      3'UTR chr17:79529397(-) A-I      3'UTR chr17:79529709(-) A-I      3'UTR chr17:79530295(-) A-I      3'UTR chr17:79530707(-) A-I      3'UTR chr17:79530030(-) A-I      3'UTR chr17:79558216(-) A-I      intronic chr17:79529136(-) A-I      3'UTR chr17:79527377(-) A-I      intronic chr17:79608128(-) A-I      intronic chr17:79530239(-) A-I      3'UTR chr17:79568482(-) A-I      intronic chr17:79553406(-) A-I      intronic chr17:79530304(-) A-I      3'UTR chr17:79601898(-) A-I      intronic chr17:79530484(-) A-I      3'UTR chr17:79527012(-) A-I      intronic chr17:79528824(-) A-I      3'UTR chr17:79562628(-) A-I      intronic chr17:79530238(-) A-I      3'UTR chr17:79593740(-) A-I      intronic chr17:79529866(-) A-I      3'UTR chr17:79584592(-) A-I      intronic chr17:79542391(-) A-I      intronic chr17:79529808(-) A-I      3'UTR chr17:79552952(-) A-I      intronic chr17:79530697(-) A-I      3'UTR chr17:79557644(-) A-I      intronic chr17:79597458(-) A-I      intronic chr17:79527033(-) A-I      intronic chr17:79529513(-) A-I      3'UTR chr17:79528912(-) A-I      3'UTR chr17:79584579(-) A-I      intronic chr17:79529244(-) A-I      3'UTR chr17:79530690(-) A-I      3'UTR chr17:79582293(-) A-I      intronic chr17:79527278(-) A-I      intronic chr17:79568558(-) A-I      intronic chr17:79530131(-) A-I      3'UTR chr17:79530317(-) A-I      3'UTR chr17:79578473(-) A-I      intronic chr17:79597690(-) A-I      intronic chr17:79530169(-) A-I      3'UTR chr17:79530480(-) A-I      3'UTR chr17:79526923(-) A-I      intronic chr17:79530106(-) A-I      3'UTR chr17:79562348(-) A-I      intronic chr17:79601749(-) A-I      intronic chr17:79529175(-) A-I      3'UTR chr17:79529508(-) A-I      3'UTR chr17:79555573(-) A-I      intronic chr17:79598354(-) A-I      intronic chr17:79529838(-) A-I      3'UTR chr17:79561850(-) A-I      intronic chr17:79531055(-) A-I      3'UTR chr17:79529561(-) A-I      3'UTR chr17:79529417(-) A-I      3'UTR chr17:79529792(-) A-I      3'UTR chr17:79530225(-) A-I      3'UTR chr17:79578224(-) A-I      intronic chr17:79601299(-) A-I      intronic chr17:79529716(-) A-I      3'UTR chr17:79541874(-) A-I      intronic chr17:79546365(-) A-I      intronic chr17:79529898(-) A-I      3'UTR chr17:79529559(-) A-I      3'UTR chr17:79529195(-) A-I      3'UTR chr17:79556375(-) A-I      intronic chr17:79529393(-) A-I      3'UTR chr17:79530563(-) A-I      3'UTR chr17:79529496(-) A-I      3'UTR chr17:79570437(-) A-I      intronic chr17:79600093(-) A-I      intronic chr17:79530137(-) A-I      3'UTR chr17:79596391(-) A-I      intronic chr17:79555516(-) A-I      intronic chr17:79552433(-) A-I      intronic chr17:79552424(-) A-I      intronic chr17:79583260(-) A-I      intronic chr17:79546402(-) A-I      intronic chr17:79552080(-) A-I      intronic chr17:79526867(-) A-I      intronic chr17:79599024(-) A-I      intronic chr17:79597657(-) A-I      intronic chr17:79539484(-) A-I      intronic chr17:79601776(-) A-I      intronic chr17:79603046(-) A-I      intronic chr17:79598954(-) A-I      intronic chr17:79526896(-) A-I      intronic chr17:79527399(-) A-I      intronic chr17:79584465(-) A-I      intronic chr17:79553600(-) A-I      intronic chr17:79597459(-) A-I      intronic chr17:79527339(-) A-I      intronic chr17:79596323(-) A-I      intronic chr17:79541810(-) A-I      intronic chr17:79599078(-) A-I      intronic chr17:79591562(-) A-I      intronic chr17:79556841(-) A-I      intronic chr17:79562758(-) A-I      intronic chr17:79597889(-) A-I      intronic chr17:79607285(-) A-I      intronic chr17:79557568(-) A-I      intronic chr17:79552601(-) A-I      intronic chr17:79603210(-) A-I      intronic chr17:79607280(-) A-I      intronic chr17:79527500(-) A-I      intronic chr17:79572130(-) A-I      intronic chr17:79597651(-) A-I      intronic chr17:79578260(-) A-I      intronic chr17:79571988(-) A-I      intronic chr17:79582264(-) A-I      intronic chr17:79563949(-) A-I      intronic chr17:79603077(-) A-I      intronic chr17:79546157(-) A-I      intronic chr17:79597881(-) A-I      intronic chr17:79527567(-) A-I      intronic chr17:79527239(-) A-I      intronic chr17:79603215(-) A-I      intronic chr17:79546360(-) A-I      intronic chr17:79562673(-) A-I      intronic chr17:79556830(-) A-I      intronic chr17:79603136(-) A-I      intronic chr17:79562735(-) A-I      intronic chr17:79603095(-) A-I      intronic chr17:79526866(-) A-I      intronic chr17:79542400(-) A-I      intronic chr17:79526965(-) A-I      intronic chr17:79601171(-) A-I      intronic chr17:79549679(-) A-I      intronic chr17:79554973(-) A-I      intronic chr17:79527490(-) A-I      intronic chr17:79582263(-) A-I      intronic chr17:79562773(-) A-I      intronic chr17:79597492(-) A-I      intronic chr17:79562769(-) A-I      intronic chr17:79599503(-) A-I      intronic chr17:79527036(-) A-I      intronic chr17:79549496(-) A-I      intronic chr17:79527281(-) A-I      intronic chr17:79599952(-) A-I      intronic chr17:79576216(-) A-I      intronic chr17:79533094(-) A-I      intronic chr17:79550358(-) A-I      intronic chr17:79599301(-) A-I      intronic chr17:79596037(-) A-I      intronic chr17:79549724(-) A-I      intronic chr17:79526897(-) A-I      intronic chr17:79553553(-) A-I      intronic chr17:79582319(-) A-I      intronic chr17:79526891(-) A-I      intronic chr17:79578338(-) A-I      intronic chr17:79608108(-) A-I      intronic chr17:79527395(-) A-I      intronic chr17:79527472(-) A-I      intronic chr17:79527570(-) A-I      intronic chr17:79589650(-) A-I      intronic chr17:79598160(-) A-I      intronic chr17:79546382(-) A-I      intronic chr17:79527437(-) A-I      intronic chr17:79603286(-) A-I      intronic chr17:79596328(-) A-I      intronic chr17:79549552(-) A-I      intronic chr17:79595440(-) A-I      intronic chr17:79561043(-) A-I      intronic chr17:79562263(-) A-I      intronic chr17:79601300(-) A-I      intronic chr17:79553524(-) A-I      intronic chr17:79527187(-) A-I      intronic chr17:79549480(-) A-I      intronic chr17:79597592(-) A-I      intronic chr17:79552802(-) A-I      intronic chr17:79551936(-) A-I      intronic chr17:79602162(-) A-I      intronic chr17:79589759(-) A-I      intronic chr17:79527226(-) A-I      intronic chr17:79572582(-) A-I      intronic chr17:79578436(-) A-I      intronic chr17:79541796(-) A-I      intronic chr17:79561501(-) A-I      intronic chr17:79587374(-) A-I      intronic chr17:79562335(-) A-I      intronic chr17:79597387(-) A-I      intronic chr17:79602283(-) A-I      intronic chr17:79603173(-) A-I      intronic chr17:79530327(-) A-I      3'UTR chr17:79529055(-) A-I      3'UTR chr17:79529443(-) A-I      3'UTR chr17:79529134(-) A-I      3'UTR chr17:79531044(-) A-I      3'UTR chr17:79529890(-) A-I      3'UTR chr17:79528883(-) A-I      3'UTR chr17:79529408(-) A-I      3'UTR chr17:79529361(-) A-I      3'UTR chr17:79531060(-) A-I      3'UTR chr17:79530174(-) A-I      3'UTR chr17:79530302(-) A-I      3'UTR chr17:79531045(-) A-I      3'UTR chr17:79530544(-) A-I      3'UTR chr17:79530590(-) A-I      3'UTR chr17:79529219(-) A-I      3'UTR chr17:79530229(-) A-I      3'UTR chr17:79529402(-) A-I      3'UTR chr17:79529842(-) A-I      3'UTR chr17:79528838(-) A-I      3'UTR chr17:79530222(-) A-I      3'UTR chr17:79529503(-) A-I      3'UTR chr17:79528852(-) A-I      3'UTR chr17:79529558(-) A-I      3'UTR chr17:79530032(-) A-I      3'UTR chr17:79530378(-) A-I      3'UTR chr17:79529524(-) A-I      3'UTR chr17:79531050(-) A-I      3'UTR chr17:79529950(-) A-I      3'UTR chr17:79529077(-) A-I      3'UTR chr17:79530534(-) A-I      3'UTR chr17:79529785(-) A-I      3'UTR chr17:79529782(-) A-I      3'UTR chr17:79530023(-) A-I      3'UTR chr17:79528931(-) A-I      3'UTR chr17:79529960(-) A-I      3'UTR chr17:79530582(-) A-I      3'UTR chr17:79528927(-) A-I      3'UTR chr17:79528890(-) A-I      3'UTR chr17:79529692(-) A-I      3'UTR chr17:79530018(-) A-I      3'UTR chr17:79529146(-) A-I      3'UTR chr17:79530257(-) A-I      3'UTR chr17:79530294(-) A-I      3'UTR chr17:79529196(-) A-I      3'UTR chr17:79530685(-) A-I      3'UTR chr17:79530592(-) A-I      3'UTR chr17:79528903(-) A-I      3'UTR chr17:79530345(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NPLOC4	chr17:79527621(-) A-I intron -    15342557   //22327324 chr17:79527657(-) A-I intron -    15342557 chr17:79527987(-) A-I intron -    15258596 chr17:79528000(-) A-I intron -    15258596 chr17:79528076(-) A-I intron -    15342557   //15258596 chr17:79528099(-) A-I intron -    15342557   //15258596 chr17:79528112(-) A-I intron -    15342557   //15258596   //22028664 chr17:79528121(-) A-I intron -    15342557   //22028664   //22327324 chr17:79528122(-) A-I intron -    15342557   //15258596   //22028664 chr17:79528148(-) A-I intron -    15342557 chr17:79528154(-) A-I intron -    15342557   //15258596   //22028664 chr17:79528188(-) A-I intron -    15342557   //15258596   //22028664   //21960545 chr17:79528233(-) A-I intron -    15342557   //15258596 chr17:79528264(-) A-I intron -    15342557   //15258596   //22028664 chr17:79528269(-) A-I intron -    15342557   //15258596   //22028664   //21960545   //22327324 chr17:79528713(-) A-I intron -    15342557 chr17:79528824(-) A-I intron -    15342557   //22327324 chr17:79528838(-) A-I intron -    15342557 chr17:79528873(-) A-I intron -    15342557 chr17:79528883(-) A-I intron -    15342557   //21960545 chr17:79528927(-) A-I intron -    15342557 chr17:79528931(-) A-I intron -    15342557 chr17:79529055(-) A-I intron -    15342557   //15258596 chr17:79529068(-) A-I intron -    15342557   //15258596 chr17:79529077(-) A-I intron -    15342557   //15258596 chr17:79529094(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529097(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529126(-) A-I intron -    15342557   //15258596 chr17:79529136(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529146(-) A-I intron -    15342557   //15258596 chr17:79529158(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529169(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529175(-) A-I intron -    15342557   //15258596 chr17:79529189(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529196(-) A-I intron -    15342557   //15258596 chr17:79529205(-) A-I intron -    15342557   //15258596 chr17:79529219(-) A-I intron -    15342557   //15258596 chr17:79529244(-) A-I intron -    15342557   //15258596 chr17:79529254(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529335(-) A-I intron -    15342557   //15258596 chr17:79529360(-) A-I intron -    15342557   //15258596 chr17:79529361(-) A-I intron -    15342557   //15258596 chr17:79529362(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529399(-) A-I intron -    15342557   //15258596 chr17:79529402(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529443(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529496(-) A-I intron -    15342557   //15258596   //22028664 chr17:79529503(-) A-I intron -    15342557   //15258596 chr17:79529508(-) A-I intron -    15342557   //15258596   //22028664   //22327324 chr17:79529513(-) A-I intron -    15342557   //15258596   //22028664   //22327324 chr17:79529558(-) A-I intron -    15342557   //22028664   //21960545 chr17:79529692(-) A-I intron -    15258596 chr17:79529710(-) A-I intron -    15342557   //15258596 chr17:79529773(-) A-I intron -    15342557   //15258596 chr17:79529785(-) A-I intron -    15342557   //15258596 chr17:79529792(-) A-I intron -    15342557   //15258596 chr17:79529841(-) A-I intron -    15342557   //15258596   //21960545 chr17:79529844(-) A-I intron -    15342557 chr17:79529854(-) A-I intron -    15342557 chr17:79529880(-) A-I intron -    15342557 chr17:79529882(-) A-I intron -    15342557   //21960545 chr17:79529890(-) A-I intron -    15342557 chr17:79529898(-) A-I intron -    15342557 chr17:79529938(-) A-I intron -    15342557   //15258596 chr17:79529942(-) A-I intron -    15342557   //15258596 chr17:79529950(-) A-I intron -    15342557   //15258596 chr17:79530018(-) A-I intron -    15342557   //15258596 chr17:79530023(-) A-I intron -    15342557   //15258596 chr17:79530131(-) A-I intron -    15342557   //15258596 chr17:79530132(-) A-I intron -    15342557   //15258596 chr17:79530137(-) A-I intron -    15342557   //15258596 chr17:79530203(-) A-I intron -    15342557   //15258596 chr17:79530212(-) A-I intron -    15342557   //15258596 chr17:79530222(-) A-I intron -    15342557 chr17:79530225(-) A-I intron -    15342557 chr17:79530229(-) A-I intron -    15342557   //15258596 chr17:79530238(-) A-I intron -    15342557   //15258596 chr17:79530239(-) A-I intron -    15342557   //15258596 chr17:79530268(-) A-I intron -    15342557   //15258596 chr17:79530302(-) A-I intron -    15342557   //15258596 chr17:79530317(-) A-I intron -    15342557   //15258596 chr17:79530327(-) A-I intron -    15342557   //15258596 chr17:79530336(-) A-I intron -    15342557   //15258596 chr17:79530345(-) A-I intron -    15342557   //15258596 chr17:79530366(-) A-I intron -    15342557   //15258596 chr17:79530534(-) A-I intron -    15342557   //15258596   //21960545 chr17:79530536(-) A-I intron -    15342557   //15258596   //21960545   //22327324 chr17:79530544(-) A-I intron -    15342557   //15258596 chr17:79530582(-) A-I intron -    15342557   //15258596   //21960545 chr17:79530985(-) A-I intron -    15342557 chr17:79531007(-) A-I intron -    15342557   //21960545 chr17:79531021(-) A-I intron -    15342557   //21960545 chr17:79526891(-) A-I intron -    22327324 chr17:79527570(-) A-I intron -    22327324 chr17:79528644(-) A-I intron -    21960545   //22327324 chr17:79528745(-) A-I intron -    21960545   //22327324 chr17:79528748(-) A-I intron -    21960545   //22327324 chr17:79530371(-) A-I intron -    22327324 chr17:79530480(-) A-I intron -    22327324 chr17:79528089(-) A-I intron -    22028664 chr17:79528092(-) A-I intron -    22028664 chr17:79528155(-) A-I intron -    22028664 chr17:79528158(-) A-I intron -    22028664 chr17:79528161(-) A-I intron -    22028664 chr17:79528164(-) A-I intron -    22028664   //21960545 chr17:79528202(-) A-I intron -    22028664   //21960545 chr17:79528211(-) A-I intron -    22028664   //21960545 chr17:79529043(-) A-I intron -    22028664   //21960545 chr17:79529134(-) A-I intron -    22028664 chr17:79529397(-) A-I intron -    22028664 chr17:79529471(-) A-I intron -    22028664 chr17:79529524(-) A-I intron -    22028664 chr17:79529557(-) A-I intron -    22028664 chr17:79529561(-) A-I intron -    21960545 chr17:79531050(-) A-I intron -    21960545 chr17:79531055(-) A-I intron -    21960545 chr17:79531093(-) A-I intron -    21960545 chr17:79527624(-) A-I intron -    21960545 chr17:79528163(-) A-I intron -    21960545 chr17:79530107(-) A-I intron -    21960545 chr17:79531020(-) A-I intron -    21960545 chr17:79552903(-) A-I intron -    21960545 chr17:79557592(-) A-I intron -    21960545 chr17:79528269(-) A-G intron -    21725310 chr17:79528748(-) A-G intron -    21725310 chr17:79529558(-) A-G intron -    21725310 chr17:79529841(-) A-G intron -    21725310 chr17:79530063(-) A-G intron -    21725310 chr17:79530371(-) A-G intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NPLOC4	chr17:79523935-79523936(-) m6A 3'UTR       24284625 chr17:79524028-79524029(-) m6A 3'UTR       24284625//24981863 chr17:79524106-79524107(-) m6A 3'UTR       24284625//24981863//22575960 chr17:79524174-79524175(-) m6A 3'UTR       24284625//24981863//27773535//22575960 chr17:79524542-79524543(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960 chr17:79524551-79524552(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960 chr17:79524744-79524745(-) m6A 3'UTR       24284625//25456834//22575960//22608085 chr17:79524829-79524830(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:79524869-79524870(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr17:79524937-79524938(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr17:79524944-79524945(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr17:79525001-79525002(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr17:79525012-79525013(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr17:79525181-79525182(-) m6A 3'UTR       24284625//27773535//22575960 chr17:79525196-79525197(-) m6A 3'UTR       24284625//27773535//22575960 chr17:79525242-79525243(-) m6A 3'UTR       24284625//22575960 chr17:79525460-79525461(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr17:79525475-79525476(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr17:79525575-79525576(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr17:79525600-79525601(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr17:79525629-79525630(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr17:79525758-79525759(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr17:79525996-79525997(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr17:79526061-79526062(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr17:79526172-79526173(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr17:79526259-79526260(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr17:79526289-79526290(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085 chr17:79526333-79526334(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr17:79532182-79532183(-) m6A 3'UTR//intron       24981863 chr17:79532575-79532576(-) m6A 3'UTR//CDS//exon       24284625//22575960 chr17:79532578-79532579(-) Cm 3'UTR//CDS//exon       - chr17:79532599-79532600(-) m6A 3'UTR//5'UTR//CDS//exon       24284625//22575960 chr17:79533425-79533426(-) m6A 5'UTR//intron       24284625 chr17:79539100-79539101(-) Y 3'UTR//CDS//exon       25219674 chr17:79539106-79539107(-) m6A 3'UTR//CDS//exon       24284625//27773535 chr17:79555154-79555155(-) m6A exon//intron       24284625//27773535 chr17:79564322-79564323(-) m6A 3'UTR//CDS//exon       22575960 chr17:79567381-79567382(-) m6A 3'UTR//CDS       22575960 chr17:79571625-79571626(-) m6A 3'UTR//CDS       26404942 chr17:79571670-79571671(-) m6A 3'UTR//CDS//exon       26404942 chr17:79571677-79571678(-) m6A 3'UTR//CDS//exon       26404942 chr17:79571736-79571737(-) m6A 3'UTR//CDS//exon       26404942//27773535 chr17:79573723-79573724(-) m6A 3'UTR//CDS//exon       26404942//27773535 chr17:79573816-79573817(-) m6A 3'UTR//CDS//exon       27773535//22575960 chr17:79575825-79575826(-) m6A 3'UTR//CDS//exon//intron       22575960 chr17:79575834-79575835(-) m6A CDS//exon//intron       22575960 chr17:79580352-79580353(-) m6A CDS//exon       - chr17:79580381-79580382(-) m6A CDS//exon       - chr17:79581389-79581390(-) m6A exon//intron       26404942 chr17:79589243-79589244(-) m6A CDS//exon       26404942 chr17:79589248-79589249(-) m6A CDS//exon       26404942 chr17:79596773-79596774(-) m6A CDS//exon       24209618 chr17:79603426-79603427(-) m6A exon//intron       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NPLOC4	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-5p
Interactor2: NPLOC4

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	miRanda//PARalyzer//Targetscan
Support Database	ViRBase//VIRmiRNA//VmiReg

References:

PMID	22100165	Target region	3'UTR
Source	ViRBase//VIRmiRNA//VmiReg	Interactor1 expression	None
Tissue or cell line	BC-1 cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.