Basic Information:

  VIRBase ID:  

VHID00492421

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:  MIMAT0015216          WNT4:  NM_030761     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-5p	WNT4
miRBase Accession/Entrez ID	MIMAT0015216	54361
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SERKAL//WNT-4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	WNT4	chr1:22444072-22444073(-) m6A 3'UTR       25456834 chr1:22444087-22444088(-) m6A 3'UTR       25456834 chr1:22444103-22444104(-) m6A 3'UTR       25456834 chr1:22444181-22444182(-) m6A 3'UTR       25456834 chr1:22445184-22445185(-) m6A 3'UTR       25456834 chr1:22445968-22445969(-) m6A 3'UTR       25456834 chr1:22446019-22446020(-) m6A 3'UTR       25456834//24981863 chr1:22446074-22446075(-) m6A 3'UTR       25456834//24981863 chr1:22446105-22446106(-) m6A 3'UTR       25456834//24981863 chr1:22446481-22446482(-) m6A 3'UTR       - chr1:22446750-22446751(-) m6A CDS       25456834//24981863 chr1:22446792-22446793(-) m6A CDS       25456834//24981863 chr1:22453657-22453658(-) m6A 3'UTR//intron       24981863 chr1:22453675-22453676(-) m6A 3'UTR//intron       25456834//24981863 chr1:22453724-22453725(-) m6A 3'UTR//intron       25456834//24981863 chr1:22453765-22453766(-) m6A CDS//intron       25456834//24981863 chr1:22453802-22453803(-) m6A CDS//intron       25456834 chr1:22453838-22453839(-) m6A CDS//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	WNT4	Exosome Blood     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-5p
Interactor2: WNT4

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg