Basic Information:

  VIRBase ID:  

VHID00491406

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:  MIMAT0015216          TNFSF18:  NM_005092     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-5p	TNFSF18
miRBase Accession/Entrez ID	MIMAT0015216	8995
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AITRL//GITRL//hGITRL//TL6//TNLG2A

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TNFSF18	chr1:173010255-173010256(-) m6A 3'UTR       - chr1:173010275-173010276(-) m6A 3'UTR       - chr1:173010320-173010321(-) m6A 3'UTR       - chr1:173010340-173010341(-) m6A 3'UTR       - chr1:173010386-173010387(-) m6A 3'UTR       - chr1:173010391-173010392(-) m6A 3'UTR       - chr1:173010503-173010504(-) m6A 3'UTR       - chr1:173010594-173010595(-) m6A CDS       - chr1:173010603-173010604(-) m6A CDS       24981863 chr1:173010625-173010626(-) m6A CDS       24981863 chr1:173010654-173010655(-) m6A CDS       24981863 chr1:173010664-173010665(-) m6A CDS       24981863 chr1:173010675-173010676(-) m6A CDS       24981863 chr1:173010681-173010682(-) m6A CDS       24981863 chr1:173010723-173010724(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TNFSF18	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-5p
Interactor2: TNFSF18

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg