Basic Information:

  VIRBase ID:  

VHID00491279

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-8-5p:  MIMAT0015216          FZD5:  NM_003468     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-8-5p	FZD5
miRBase Accession/Entrez ID	MIMAT0015216	7855
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C2orf31//HFZ5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FZD5	chr2:208628241-208628242(-) m6A 3'UTR       25456834//24981863//22608085 chr2:208628276-208628277(-) m6A 3'UTR       25456834//24981863//22608085 chr2:208628323-208628324(-) m6A 3'UTR       25456834//24981863//22608085 chr2:208628393-208628394(-) m6A 3'UTR       24981863 chr2:208629180-208629181(-) m6A 3'UTR       - chr2:208630523-208630524(-) m6A 3'UTR       27773535 chr2:208630553-208630554(-) m6A 3'UTR       27773535 chr2:208630605-208630606(-) m6A 3'UTR       27773535 chr2:208630695-208630696(-) m6A 3'UTR       24981863//27773535 chr2:208630744-208630745(-) m6A 3'UTR       24981863//27773535 chr2:208630759-208630760(-) m6A 3'UTR       27773535 chr2:208631473-208631474(-) m6A 3'UTR       27773535 chr2:208631550-208631551(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr2:208631687-208631688(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:208631764-208631765(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr2:208631799-208631800(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr2:208632141-208632142(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:208632270-208632271(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr2:208632276-208632277(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr2:208632312-208632313(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr2:208632538-208632539(-) m6A CDS       24284625 chr2:208633221-208633222(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:208634019-208634020(-) m6A 5'UTR       24284625 chr2:208634036-208634037(-) m6A 5'UTR       24284625 chr2:208634099-208634100(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FZD5	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HCC cell line (HepG2)     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-8-5p
Interactor2: FZD5

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg