Basic Information:

  VIRBase ID:  

VHID00487026

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-3p:  MIMAT0015214          FIBIN:  NM_203371     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-1-3p	FIBIN
miRBase Accession/Entrez ID	MIMAT0015214	387758
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FIBIN	chr11:27015748-27015749(+) m6A 5'UTR       24209618//24981863 chr11:27015931-27015932(+) m6A 5'UTR       25456834//24981863//22608085 chr11:27015963-27015964(+) m6A 5'UTR       25456834//24981863//22608085 chr11:27016005-27016006(+) m6A 5'UTR       25456834//24981863//22608085 chr11:27016166-27016167(+) m6A CDS       24209618 chr11:27016197-27016198(+) m6A CDS       24209618 chr11:27016473-27016474(+) m6A CDS       24209618//25456834//24981863//22608085 chr11:27016519-27016520(+) m6A CDS       24209618//25456834//24981863//22608085 chr11:27016524-27016525(+) m6A CDS       24209618//25456834//24981863//22608085 chr11:27016554-27016555(+) m6A CDS       24209618//25456834//24981863//22608085 chr11:27016598-27016599(+) m6A CDS       24209618//25456834//24981863//22608085 chr11:27016605-27016606(+) m6A CDS       24209618//25456834//24981863//22608085 chr11:27016626-27016627(+) m6A CDS       24209618//25456834//24981863//22608085 chr11:27016667-27016668(+) m6A CDS       24209618//24981863//22608085 chr11:27016770-27016771(+) m6A 3'UTR       24981863//22608085 chr11:27016873-27016874(+) m6A 3'UTR       24981863//22608085 chr11:27016951-27016952(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FIBIN	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-1-3p
Interactor2: FIBIN

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg