Basic Information:

  VIRBase ID:  

VHID00486974

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-3p:  MIMAT0015214          TMEM240:  NM_001114748     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-1-3p	TMEM240
miRBase Accession/Entrez ID	MIMAT0015214	339453
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C1orf70//SCA21

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM240	chr1:1470646-1470647(-) m6A 3'UTR       25456834//24981863 chr1:1470651-1470652(-) m6A 3'UTR       25456834//24981863 chr1:1470677-1470678(-) m6A 3'UTR       25456834//24981863 chr1:1470726-1470727(-) m6A 3'UTR       25456834//24981863 chr1:1470777-1470778(-) m6A CDS       25456834//24981863 chr1:1470799-1470800(-) m6A CDS       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM240	Chromatin K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-1-3p
Interactor2: TMEM240

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg