Basic Information:

  VIRBase ID:  

VHID00486681

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-3p:  MIMAT0015214          TMEM86A:  NM_153347     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-1-3p	TMEM86A
miRBase Accession/Entrez ID	MIMAT0015214	144110
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM86A	chr11:18723344-18723345(+) m6A CDS       25456834//24981863 chr11:18723355-18723356(+) m6A CDS       25456834//24981863//22608085 chr11:18723401-18723402(+) m6A CDS       25456834//24981863//22608085 chr11:18723528-18723529(+) m6A CDS       24209618//25456834//24981863//22608085 chr11:18723537-18723538(+) m6A CDS       24209618//25456834//24981863//22608085 chr11:18723613-18723614(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr11:18723724-18723725(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr11:18723738-18723739(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr11:18723775-18723776(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr11:18723792-18723793(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr11:18723819-18723820(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr11:18723828-18723829(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr11:18723924-18723925(+) m6A 3'UTR       24209618//25456834//22608085 chr11:18724009-18724010(+) m6A 3'UTR       25456834//22608085 chr11:18724015-18724016(+) m6A 3'UTR       25456834//22608085 chr11:18724052-18724053(+) m6A 3'UTR       25456834 chr11:18724107-18724108(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM86A	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-1-3p
Interactor2: TMEM86A

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg