Basic Information:

  VIRBase ID:  

VHID00485802

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-3p:  MIMAT0015214          KIRREL1:  NM_018240     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-1-3p	KIRREL1
miRBase Accession/Entrez ID	MIMAT0015214	55243
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KIRREL//NEPH1//NPHS23

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KIRREL1	chr1:158041756(+) A-I      intronic chr1:158001798(+) A-I      intronic chr1:158002744(+) A-I      intronic chr1:158020518(+) A-I      intronic chr1:158001782(+) A-I      intronic chr1:158007035(+) A-I      intronic chr1:158014511(+) A-I      intronic chr1:158007215(+) A-I      intronic chr1:158007224(+) A-I      intronic chr1:158012676(+) A-I      intronic chr1:158014489(+) A-I      intronic chr1:158014510(+) A-I      intronic chr1:158001774(+) A-I      intronic chr1:158001775(+) A-I      intronic chr1:158002617(+) A-I      intronic chr1:158002647(+) A-I      intronic chr1:158014422(+) A-I      intronic chr1:158014401(+) A-I      intronic chr1:158012757(+) A-I      intronic chr1:158002835(+) A-I      intronic chr1:158007030(+) A-I      intronic chr1:158023909(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KIRREL1	Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-1-3p
Interactor2: KIRREL1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg