Basic Information:

  VIRBase ID:  

VHID00484005

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-3p:  MIMAT0015214          ADH6:  NR_132990     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-1-3p	ADH6
miRBase Accession/Entrez ID	MIMAT0015214	130
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADH-5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADH6	chr4:100124474-100124475(-) m6A 3'UTR       27773535 chr4:100125353-100125354(-) m6A 3'UTR       27773535 chr4:100126041-100126042(-) m6A 3'UTR//intron       27773535 chr4:100126076-100126077(-) m6A 3'UTR//intron       27773535 chr4:100126091-100126092(-) m6A 3'UTR//CDS       27773535 chr4:100140419-100140420(-) m6A 5'UTR       24981863//27773535 chr4:100140438-100140439(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADH6	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-1-3p
Interactor2: ADH6

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg