Basic Information:

  VIRBase ID:  

VHID00483802

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-11-5p:  MIMAT0015213          FAM126B:  NM_001321625     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-11-5p	FAM126B
miRBase Accession/Entrez ID	MIMAT0015213	285172
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HYCC2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FAM126B	chr2:201859667(-) A-I      intronic chr2:201874218(-) A-I      intronic chr2:201855154(-) A-I      intronic chr2:201843236(-) A-I      3'UTR chr2:201917231(-) A-I      intronic chr2:201926003(-) A-I      intronic chr2:201843271(-) A-I      3'UTR chr2:201874251(-) A-I      intronic chr2:201874252(-) A-I      intronic chr2:201918010(-) A-I      intronic chr2:201874311(-) A-I      intronic chr2:201848942(-) A-I      intronic chr2:201874321(-) A-I      intronic chr2:201842370(-) A-I      3'UTR chr2:201842531(-) A-I      3'UTR chr2:201930865(-) A-I      intronic chr2:201842513(-) A-I      3'UTR chr2:201874347(-) A-I      intronic chr2:201918025(-) A-I      intronic chr2:201855210(-) A-I      intronic chr2:201855187(-) A-I      intronic chr2:201855177(-) A-I      intronic chr2:201855160(-) A-I      intronic chr2:201874350(-) A-I      intronic chr2:201914842(-) A-I      intronic chr2:201914854(-) A-I      intronic chr2:201848943(-) A-I      intronic chr2:201849766(-) A-I      intronic chr2:201849784(-) A-I      intronic chr2:201842404(-) A-I      3'UTR chr2:201843489(-) A-I      3'UTR chr2:201866527(-) A-I      intronic chr2:201865086(-) A-I      intronic chr2:201864878(-) A-I      intronic chr2:201864386(-) A-I      intronic chr2:201864385(-) A-I      intronic chr2:201864268(-) A-I      intronic chr2:201862721(-) A-I      intronic chr2:201862715(-) A-I      intronic chr2:201862673(-) A-I      intronic chr2:201859642(-) A-I      intronic chr2:201859641(-) A-I      intronic chr2:201859629(-) A-I      intronic chr2:201859255(-) A-I      intronic chr2:201859210(-) A-I      intronic chr2:201859176(-) A-I      intronic chr2:201859173(-) A-I      intronic chr2:201859072(-) A-I      intronic chr2:201858515(-) A-I      intronic chr2:201858470(-) A-I      intronic chr2:201856527(-) A-I      intronic chr2:201856290(-) A-I      intronic chr2:201856288(-) A-I      intronic chr2:201856192(-) A-I      intronic chr2:201847675(-) A-I      intronic chr2:201847613(-) A-I      intronic chr2:201847570(-) A-I      intronic chr2:201874360(-) A-I      intronic chr2:201874361(-) A-I      intronic chr2:201874377(-) A-I      intronic chr2:201874378(-) A-I      intronic chr2:201874386(-) A-I      intronic chr2:201874387(-) A-I      intronic chr2:201874410(-) A-I      intronic chr2:201874439(-) A-I      intronic chr2:201877084(-) A-I      intronic chr2:201877089(-) A-I      intronic chr2:201877132(-) A-I      intronic chr2:201881042(-) A-I      intronic chr2:201881119(-) A-I      intronic chr2:201896311(-) A-I      intronic chr2:201896234(-) A-I      intronic chr2:201896218(-) A-I      intronic chr2:201896183(-) A-I      intronic chr2:201850289(-) A-I      intronic chr2:201895399(-) A-I      intronic chr2:201895394(-) A-I      intronic chr2:201894733(-) A-I      intronic chr2:201889789(-) A-I      intronic chr2:201889604(-) A-I      intronic chr2:201889096(-) A-I      intronic chr2:201889068(-) A-I      intronic chr2:201885762(-) A-I      intronic chr2:201885661(-) A-I      intronic chr2:201885660(-) A-I      intronic chr2:201881263(-) A-I      intronic chr2:201884328(-) A-I      intronic chr2:201874447(-) A-I      intronic chr2:201874668(-) A-I      intronic chr2:201874692(-) A-I      intronic chr2:201874705(-) A-I      intronic chr2:201874715(-) A-I      intronic chr2:201876980(-) A-I      intronic chr2:201885588(-) A-I      intronic chr2:201884423(-) A-I      intronic chr2:201884394(-) A-I      intronic chr2:201873545(-) A-I      intronic chr2:201873592(-) A-I      intronic chr2:201849692(-) A-I      intronic chr2:201849644(-) A-I      intronic chr2:201849044(-) A-I      intronic chr2:201848995(-) A-I      intronic chr2:201848932(-) A-I      intronic chr2:201848846(-) A-I      intronic chr2:201847684(-) A-I      intronic chr2:201847682(-) A-I      intronic chr2:201904814(-) A-I      intronic chr2:201904641(-) A-I      intronic chr2:201904788(-) A-I      intronic chr2:201904653(-) A-I      intronic chr2:201866523(-) A-I      intronic chr2:201856180(-) A-I      intronic chr2:201856170(-) A-I      intronic chr2:201856123(-) A-I      intronic chr2:201896964(-) A-I      intronic chr2:201867451(-) A-I      intronic chr2:201867381(-) A-I      intronic chr2:201856019(-) A-I      intronic chr2:201856013(-) A-I      intronic chr2:201866667(-) A-I      intronic chr2:201855626(-) A-I      intronic chr2:201855490(-) A-I      intronic chr2:201855432(-) A-I      intronic chr2:201855348(-) A-I      intronic chr2:201854523(-) A-I      intronic chr2:201854487(-) A-I      intronic chr2:201854474(-) A-I      intronic chr2:201904833(-) A-I      intronic chr2:201913841(-) A-I      intronic chr2:201914673(-) A-I      intronic chr2:201914695(-) A-I      intronic chr2:201854472(-) A-I      intronic chr2:201854468(-) A-I      intronic chr2:201914696(-) A-I      intronic chr2:201854455(-) A-I      intronic chr2:201854437(-) A-I      intronic chr2:201854363(-) A-I      intronic chr2:201850400(-) A-I      intronic chr2:201914712(-) A-I      intronic chr2:201914823(-) A-I      intronic chr2:201914875(-) A-I      intronic chr2:201914877(-) A-I      intronic chr2:201915550(-) A-I      intronic chr2:201915575(-) A-I      intronic chr2:201917068(-) A-I      intronic chr2:201917219(-) A-I      intronic chr2:201917262(-) A-I      intronic chr2:201917315(-) A-I      intronic chr2:201917323(-) A-I      intronic chr2:201917942(-) A-I      intronic chr2:201917948(-) A-I      intronic chr2:201866650(-) A-I      intronic chr2:201850297(-) A-I      intronic chr2:201850246(-) A-I      intronic chr2:201849790(-) A-I      intronic chr2:201867452(-) A-I      intronic chr2:201867519(-) A-I      intronic chr2:201867995(-) A-I      intronic chr2:201868125(-) A-I      intronic chr2:201868349(-) A-I      intronic chr2:201868356(-) A-I      intronic chr2:201870989(-) A-I      intronic chr2:201870990(-) A-I      intronic chr2:201873445(-) A-I      intronic chr2:201917951(-) A-I      intronic chr2:201873447(-) A-I      intronic chr2:201873521(-) A-I      intronic chr2:201917983(-) A-I      intronic chr2:201849782(-) A-I      intronic chr2:201849748(-) A-I      intronic chr2:201918015(-) A-I      intronic chr2:201873526(-) A-I      intronic chr2:201849747(-) A-I      intronic chr2:201918019(-) A-I      intronic chr2:201918021(-) A-I      intronic chr2:201918022(-) A-I      intronic chr2:201918050(-) A-I      intronic chr2:201918083(-) A-I      intronic chr2:201918603(-) A-I      intronic chr2:201918604(-) A-I      intronic chr2:201918624(-) A-I      intronic chr2:201918635(-) A-I      intronic chr2:201919638(-) A-I      intronic chr2:201919677(-) A-I      intronic chr2:201920104(-) A-I      intronic chr2:201921311(-) A-I      intronic chr2:201921396(-) A-I      intronic chr2:201926073(-) A-I      intronic chr2:201926999(-) A-I      intronic chr2:201931064(-) A-I      intronic chr2:201931088(-) A-I      intronic chr2:201849722(-) A-I      intronic chr2:201866641(-) A-I      intronic chr2:201866559(-) A-I      intronic chr2:201866532(-) A-I      intronic chr2:201842487(-) A-I      3'UTR chr2:201842348(-) A-I      3'UTR chr2:201843229(-) A-I      3'UTR chr2:201842572(-) A-I      3'UTR chr2:201842462(-) A-I      3'UTR chr2:201843427(-) A-I      3'UTR chr2:201843403(-) A-I      3'UTR chr2:201843401(-) A-I      3'UTR chr2:201843382(-) A-I      3'UTR chr2:201843378(-) A-I      3'UTR chr2:201843377(-) A-I      3'UTR chr2:201842344(-) A-I      3'UTR chr2:201843375(-) A-I      3'UTR chr2:201843371(-) A-I      3'UTR chr2:201843366(-) A-I      3'UTR chr2:201843296(-) A-I      3'UTR chr2:201842456(-) A-I      3'UTR chr2:201842549(-) A-I      3'UTR chr2:201843241(-) A-I      3'UTR chr2:201842506(-) A-I      3'UTR chr2:201842436(-) A-I      3'UTR chr2:201843275(-) A-I      3'UTR chr2:201842425(-) A-I      3'UTR chr2:201843266(-) A-I      3'UTR chr2:201842401(-) A-I      3'UTR chr2:201842382(-) A-I      3'UTR chr2:201855627(-) A-I      intronic chr2:201867465(-) A-I      intronic chr2:201870943(-) A-I      intronic chr2:201847754(-) A-I      intronic chr2:201930885(-) A-I      intronic chr2:201850166(-) A-I      intronic chr2:201848895(-) A-I      intronic chr2:201867975(-) A-I      intronic chr2:201914305(-) A-I      intronic chr2:201849712(-) A-I      intronic chr2:201896292(-) A-I      intronic chr2:201868639(-) A-I      intronic chr2:201873538(-) A-I      intronic chr2:201873383(-) A-I      intronic chr2:201874582(-) A-I      intronic chr2:201920601(-) A-I      intronic chr2:201877996(-) A-I      intronic chr2:201926116(-) A-I      intronic chr2:201870721(-) A-I      intronic chr2:201885526(-) A-I      intronic chr2:201859163(-) A-I      intronic chr2:201848839(-) A-I      intronic chr2:201896936(-) A-I      intronic chr2:201864273(-) A-I      intronic chr2:201914212(-) A-I      intronic chr2:201885655(-) A-I      intronic chr2:201896912(-) A-I      intronic chr2:201916778(-) A-I      intronic chr2:201873312(-) A-I      intronic chr2:201874307(-) A-I      intronic chr2:201874570(-) A-I      intronic chr2:201859507(-) A-I      intronic chr2:201905411(-) A-I      intronic chr2:201848922(-) A-I      intronic chr2:201874281(-) A-I      intronic chr2:201877101(-) A-I      intronic chr2:201849435(-) A-I      intronic chr2:201873435(-) A-I      intronic chr2:201905284(-) A-I      intronic chr2:201865110(-) A-I      intronic chr2:201850371(-) A-I      intronic chr2:201874334(-) A-I      intronic chr2:201918640(-) A-I      intronic chr2:201914170(-) A-I      intronic chr2:201905230(-) A-I      intronic chr2:201874583(-) A-I      intronic chr2:201873505(-) A-I      intronic chr2:201884398(-) A-I      intronic chr2:201896739(-) A-I      intronic chr2:201885718(-) A-I      intronic chr2:201873374(-) A-I      intronic chr2:201917209(-) A-I      intronic chr2:201850315(-) A-I      intronic chr2:201855572(-) A-I      intronic chr2:201848957(-) A-I      intronic chr2:201859476(-) A-I      intronic chr2:201864246(-) A-I      intronic chr2:201855703(-) A-I      intronic chr2:201859638(-) A-I      intronic chr2:201847619(-) A-I      intronic chr2:201885693(-) A-I      intronic chr2:201864314(-) A-I      intronic chr2:201877060(-) A-I      intronic chr2:201921314(-) A-I      intronic chr2:201916824(-) A-I      intronic chr2:201855704(-) A-I      intronic chr2:201873574(-) A-I      intronic chr2:201843379(-) A-I      3'UTR chr2:201842408(-) A-I      3'UTR chr2:201842561(-) A-I      3'UTR chr2:201842426(-) A-I      3'UTR chr2:201842434(-) A-I      3'UTR chr2:201842492(-) A-I      3'UTR chr2:201842323(-) A-I      3'UTR chr2:201843336(-) A-I      3'UTR chr2:201842474(-) A-I      3'UTR chr2:201843331(-) A-I      3'UTR chr2:201843464(-) A-I      3'UTR chr2:201843363(-) A-I      3'UTR chr2:201842569(-) A-I      3'UTR chr2:201843470(-) A-I      3'UTR chr2:201842411(-) A-I      3'UTR chr2:201843373(-) A-I      3'UTR chr2:201842479(-) A-I      3'UTR chr2:201843393(-) A-I      3'UTR chr2:201849681(-) A-I      intronic chr2:201856229(-) A-I      intronic chr2:201849434(-) A-I      intronic chr2:201850227(-) A-I      intronic chr2:201848865(-) A-I      intronic chr2:201850316(-) A-I      intronic chr2:201905324(-) A-I      intronic chr2:201859109(-) A-I      intronic chr2:201881505(-) A-I      intronic chr2:201874320(-) A-I      intronic chr2:201868731(-) A-I      intronic chr2:201921241(-) A-I      intronic chr2:201918575(-) A-I      intronic chr2:201856376(-) A-I      intronic chr2:201917287(-) A-I      intronic chr2:201885659(-) A-I      intronic chr2:201914867(-) A-I      intronic chr2:201849619(-) A-I      intronic chr2:201930935(-) A-I      intronic chr2:201924518(-) A-I      intronic chr2:201854356(-) A-I      intronic chr2:201926055(-) A-I      intronic chr2:201849363(-) A-I      intronic chr2:201849038(-) A-I      intronic chr2:201850238(-) A-I      intronic chr2:201874356(-) A-I      intronic chr2:201848958(-) A-I      intronic chr2:201855263(-) A-I      intronic chr2:201905336(-) A-I      intronic chr2:201884691(-) A-I      intronic chr2:201849458(-) A-I      intronic chr2:201895561(-) A-I      intronic chr2:201914791(-) A-I      intronic chr2:201932786(-) A-I      intronic chr2:201914813(-) A-I      intronic chr2:201871110(-) A-I      intronic chr2:201870947(-) A-I      intronic chr2:201914797(-) A-I      intronic chr2:201921147(-) A-I      intronic chr2:201920549(-) A-I      intronic chr2:201896343(-) A-I      intronic chr2:201919679(-) A-I      intronic chr2:201849771(-) A-I      intronic chr2:201868235(-) A-I      intronic chr2:201914140(-) A-I      intronic chr2:201932845(-) A-I      intronic chr2:201918578(-) A-I      intronic chr2:201849642(-) A-I      intronic chr2:201898463(-) A-I      intronic chr2:201914718(-) A-I      intronic chr2:201885587(-) A-I      intronic chr2:201864174(-) A-I      intronic chr2:201849772(-) A-I      intronic chr2:201849543(-) A-I      intronic chr2:201904730(-) A-I      intronic chr2:201881597(-) A-I      intronic chr2:201849788(-) A-I      intronic chr2:201926000(-) A-I      intronic chr2:201914868(-) A-I      intronic chr2:201905247(-) A-I      intronic chr2:201850338(-) A-I      intronic chr2:201854415(-) A-I      intronic chr2:201849443(-) A-I      intronic chr2:201867518(-) A-I      intronic chr2:201847663(-) A-I      intronic chr2:201850163(-) A-I      intronic chr2:201855499(-) A-I      intronic chr2:201849734(-) A-I      intronic chr2:201859135(-) A-I      intronic chr2:201898056(-) A-I      intronic chr2:201849485(-) A-I      intronic chr2:201894710(-) A-I      intronic chr2:201869485(-) A-I      intronic chr2:201877062(-) A-I      intronic chr2:201881560(-) A-I      intronic chr2:201873305(-) A-I      intronic chr2:201874450(-) A-I      intronic chr2:201884397(-) A-I      intronic chr2:201859602(-) A-I      intronic chr2:201848996(-) A-I      intronic chr2:201874376(-) A-I      intronic chr2:201885771(-) A-I      intronic chr2:201849362(-) A-I      intronic chr2:201916899(-) A-I      intronic chr2:201895466(-) A-I      intronic chr2:201917207(-) A-I      intronic chr2:201920612(-) A-I      intronic chr2:201849625(-) A-I      intronic chr2:201847618(-) A-I      intronic chr2:201871016(-) A-I      intronic chr2:201864989(-) A-I      intronic chr2:201868701(-) A-I      intronic chr2:201850333(-) A-I      intronic chr2:201871081(-) A-I      intronic chr2:201850302(-) A-I      intronic chr2:201877169(-) A-I      intronic chr2:201855514(-) A-I      intronic chr2:201874745(-) A-I      intronic chr2:201848923(-) A-I      intronic chr2:201848927(-) A-I      intronic chr2:201873366(-) A-I      intronic chr2:201848901(-) A-I      intronic chr2:201921334(-) A-I      intronic chr2:201873499(-) A-I      intronic chr2:201864163(-) A-I      intronic chr2:201859057(-) A-I      intronic chr2:201921315(-) A-I      intronic chr2:201896916(-) A-I      intronic chr2:201920533(-) A-I      intronic chr2:201848990(-) A-I      intronic chr2:201847592(-) A-I      intronic chr2:201885607(-) A-I      intronic chr2:201914669(-) A-I      intronic chr2:201895581(-) A-I      intronic chr2:201919683(-) A-I      intronic chr2:201908728(-) A-I      intronic chr2:201848886(-) A-I      intronic chr2:201884474(-) A-I      intronic chr2:201856349(-) A-I      intronic chr2:201874645(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FAM126B	chr2:201840374(-) A-I exon 3'UTR    15342557 chr2:201842323(-) A-I exon 3'UTR    15342557   //22327324 chr2:201842391(-) A-I exon 3'UTR    15342557   //22327324 chr2:201842408(-) A-I exon 3'UTR    15342557 chr2:201842417(-) A-I exon 3'UTR    15342557 chr2:201842434(-) A-I exon 3'UTR    15342557   //22327324 chr2:201842479(-) A-I exon 3'UTR    15342557 chr2:201842492(-) A-I exon 3'UTR    15342557   //22327324 chr2:201842544(-) A-I exon 3'UTR    15342557 chr2:201842561(-) A-I exon 3'UTR    15342557 chr2:201842569(-) A-I exon 3'UTR    15342557   //22327324 chr2:201842723(-) A-I exon 3'UTR    15342557 chr2:201843295(-) A-I exon 3'UTR    15342557   //22327324 chr2:201843310(-) A-I exon 3'UTR    15342557 chr2:201843327(-) A-I exon 3'UTR    15342557 chr2:201843331(-) A-I exon 3'UTR    15342557 chr2:201843336(-) A-I exon 3'UTR    15342557 chr2:201843363(-) A-I exon 3'UTR    15342557 chr2:201843373(-) A-I exon 3'UTR    15342557   //15258596   //22327324 chr2:201843376(-) A-I exon 3'UTR    15342557   //15258596 chr2:201843379(-) A-I exon 3'UTR    15342557   //15258596 chr2:201843393(-) A-I exon 3'UTR    15342557   //15258596 chr2:201843464(-) A-I exon 3'UTR    15342557   //15258596 chr2:201843470(-) A-I exon 3'UTR    15342557   //15258596 chr2:201843471(-) A-I exon 3'UTR    15342557   //15258596   //22327324 chr2:201843578(-) A-I exon 3'UTR    15342557   //15258596 chr2:201844824(-) A-I exon 3'UTR    15342557 chr2:201845840(-) A-I exon 3'UTR    15342557 chr2:201860865(-) A-I intron -    15342557 chr2:201860891(-) A-I intron -    15342557 chr2:201860894(-) A-I intron -    15342557 chr2:201860905(-) A-I intron -    15342557 chr2:201860956(-) A-I intron -    15342557 chr2:201860992(-) A-I intron -    15342557 chr2:201861014(-) A-I intron -    15342557 chr2:201861050(-) A-I intron -    15342557 chr2:201861094(-) A-I intron -    15342557 chr2:201861100(-) A-I intron -    15342557 chr2:201861168(-) A-I intron -    15342557 chr2:201861171(-) A-I intron -    15342557 chr2:201861178(-) A-I intron -    15342557 chr2:201861233(-) A-I intron -    15342557 chr2:201861254(-) A-I intron -    15342557 chr2:201861770(-) A-I intron -    15342557 chr2:201861819(-) A-I intron -    15342557 chr2:201928715(-) A-I intron -    22327324 chr2:201842391(-) A-G exon 3'UTR    21725310 chr2:201842569(-) A-G exon 3'UTR    21725310 chr2:201847519(-) T-C intron -    22484847 chr2:201847619(-) A-G intron -    22484847 chr2:201848841(-) A-G intron -    22484847 chr2:201848865(-) A-G intron -    22484847 chr2:201848886(-) A-G intron -    22484847 chr2:201848895(-) A-G intron -    22484847 chr2:201848901(-) A-G intron -    22484847 chr2:201848922(-) A-G intron -    22484847 chr2:201848946(-) T-C intron -    22484847 chr2:201848958(-) A-G intron -    22484847 chr2:201848983(-) T-C intron -    22484847 chr2:201848990(-) A-G intron -    22484847 chr2:201848996(-) A-G intron -    22484847 chr2:201848998(-) T-C intron -    22484847 chr2:201849038(-) A-G intron -    22484847 chr2:201849618(-) A-G intron -    22484847 chr2:201849625(-) A-G intron -    22484847 chr2:201849639(-) A-G intron -    22484847 chr2:201849670(-) A-G intron -    22484847 chr2:201849681(-) A-G intron -    22484847 chr2:201849718(-) A-G intron -    22484847 chr2:201849771(-) A-G intron -    22484847 chr2:201849788(-) A-G intron -    22484847 chr2:201850268(-) A-G intron -    22484847 chr2:201850371(-) A-G intron -    22484847 chr2:201850396(-) A-G intron -    22484847 chr2:201855149(-) T-C intron -    22484847 chr2:201855225(-) T-C intron -    22484847 chr2:201855267(-) T-C intron -    22484847 chr2:201855514(-) A-G intron -    22484847 chr2:201859065(-) T-C intron -    22484847 chr2:201859135(-) A-G intron -    22484847 chr2:201859163(-) A-G intron -    22484847 chr2:201859192(-) A-G intron -    22484847 chr2:201859476(-) A-G intron -    22484847 chr2:201859506(-) A-G intron -    22484847 chr2:201859507(-) A-G intron -    22484847 chr2:201859602(-) A-G intron -    22484847 chr2:201859638(-) A-G intron -    22484847 chr2:201859644(-) T-C intron -    22484847 chr2:201859649(-) T-C intron -    22484847 chr2:201859662(-) A-G intron -    22484847 chr2:201861259(-) T-C intron -    22484847 chr2:201864176(-) A-G intron -    22484847 chr2:201864219(-) A-G intron -    22484847 chr2:201864246(-) A-G intron -    22484847 chr2:201864314(-) A-G intron -    22484847 chr2:201864610(-) T-C intron -    22484847 chr2:201864729(-) A-G intron -    22484847 chr2:201864989(-) A-G intron -    22484847 chr2:201867465(-) A-G intron -    22484847 chr2:201867518(-) A-G intron -    22484847 chr2:201867863(-) A-G intron -    22484847 chr2:201867926(-) A-G intron -    22484847 chr2:201868235(-) A-G intron -    22484847 chr2:201868629(-) A-G intron -    22484847 chr2:201868639(-) A-G intron -    22484847 chr2:201868674(-) A-G intron -    22484847 chr2:201873312(-) A-G intron -    22484847 chr2:201873366(-) A-G intron -    22484847 chr2:201873374(-) A-G intron -    22484847 chr2:201873383(-) A-G intron -    22484847 chr2:201873435(-) A-G intron -    22484847 chr2:201873497(-) A-G intron -    22484847 chr2:201873499(-) A-G intron -    22484847 chr2:201873505(-) A-G intron -    22484847 chr2:201873620(-) A-G intron -    22484847 chr2:201874334(-) A-G intron -    22484847 chr2:201874366(-) T-C intron -    22484847 chr2:201874383(-) T-C intron -    22484847 chr2:201874637(-) A-G intron -    22484847 chr2:201874645(-) A-G intron -    22484847 chr2:201874745(-) A-G intron -    22484847 chr2:201877060(-) A-G intron -    22484847 chr2:201877062(-) A-G intron -    22484847 chr2:201877101(-) A-G intron -    22484847 chr2:201877169(-) A-G intron -    22484847 chr2:201877996(-) A-G intron -    22484847 chr2:201878202(-) G-T intron -    22484847 chr2:201884474(-) A-G intron -    22484847 chr2:201885587(-) A-G intron -    22484847 chr2:201885659(-) A-G intron -    22484847 chr2:201885693(-) A-G intron -    22484847 chr2:201885718(-) A-G intron -    22484847 chr2:201885771(-) A-G intron -    22484847 chr2:201894710(-) A-G intron -    22484847 chr2:201895466(-) A-G intron -    22484847 chr2:201895561(-) A-G intron -    22484847 chr2:201895581(-) A-G intron -    22484847 chr2:201896343(-) A-G intron -    22484847 chr2:201904730(-) A-G intron -    22484847 chr2:201904775(-) A-G intron -    22484847 chr2:201904821(-) T-C intron -    22484847 chr2:201905247(-) A-G intron -    22484847 chr2:201905284(-) A-G intron -    22484847 chr2:201905309(-) A-G intron -    22484847 chr2:201905372(-) A-G intron -    22484847 chr2:201905411(-) A-G intron -    22484847 chr2:201913846(-) A-G intron -    22484847 chr2:201914718(-) A-G intron -    22484847 chr2:201914869(-) A-G intron -    22484847 chr2:201918575(-) A-G intron -    22484847 chr2:201918587(-) A-G intron -    22484847 chr2:201918640(-) A-G intron -    22484847 chr2:201919683(-) A-G intron -    22484847 chr2:201921241(-) A-G intron -    22484847 chr2:201921297(-) A-G intron -    22484847 chr2:201921314(-) A-G intron -    22484847 chr2:201921315(-) A-G intron -    22484847 chr2:201926055(-) A-G intron -    22484847 chr2:201926072(-) A-G intron -    22484847 chr2:201927375(-) G-T intron -    22484847 chr2:201930885(-) A-G intron -    22484847 chr2:201930889(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FAM126B	chr2:201839430-201839431(-) m6A 3'UTR       27773535 chr2:201839505-201839506(-) m6A 3'UTR       27773535 chr2:201840436-201840437(-) m6A 3'UTR       27773535 chr2:201840532-201840533(-) m6A 3'UTR       27773535 chr2:201840668-201840669(-) m6A 3'UTR       27773535 chr2:201843813-201843814(-) m6A 3'UTR       24981863 chr2:201843843-201843844(-) m6A 3'UTR       24981863 chr2:201845841-201845842(-) m6A 3'UTR       27773535 chr2:201845928-201845929(-) m6A 3'UTR       24981863//27773535//22608085 chr2:201845948-201845949(-) m6A 3'UTR       24981863//27773535//22608085 chr2:201845953-201845954(-) m6A 3'UTR       24981863//27773535//22608085 chr2:201846101-201846102(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr2:201846243-201846244(-) m6A 3'UTR//CDS       24209618//24981863//27773535//27371828//22575960//22608085 chr2:201846304-201846305(-) m6A 3'UTR//CDS       24209618//24981863//27773535//27371828//22608085 chr2:201846420-201846421(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr2:201846490-201846491(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr2:201846495-201846496(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr2:201846557-201846558(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr2:201910271-201910272(-) m6A 5'UTR//exon//intron       24981863 chr2:201936256-201936257(-) m6A 5'UTR//exon//intron       24981863 chr2:201936346-201936347(-) m6A 5'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FAM126B	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-11-5p
Interactor2: FAM126B

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	PARalyzer
Support Database	ViRBase

References:

PMID	22100165	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	BC-1 cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.