Detail Information

Basic Information:


  VIRBase ID:  

VHID00482081

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6040

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-11-5p:           CBFA2T2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-11-5p CBFA2T2
miRBase
Accession/Entrez ID
MIMAT0015213 9139
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - EHT//MTGR1//p85//ZMYND3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CBFA2T2
chr20:32231181(+) A-I      intronic
chr20:32234517(+) A-I      3'UTR
chr20:32110284(+) A-I      intronic
chr20:32110295(+) A-I      intronic
chr20:32110319(+) A-I      intronic
chr20:32110324(+) A-I      intronic
chr20:32110333(+) A-I      intronic
chr20:32143776(+) A-I      intronic
chr20:32234516(+) A-I      3'UTR
chr20:32234508(+) A-I      3'UTR
chr20:32234485(+) A-I      3'UTR
chr20:32099797(+) A-I      intronic
chr20:32234463(+) A-I      3'UTR
chr20:32145446(+) A-I      intronic
chr20:32231186(+) A-I      intronic
chr20:32220793(+) A-I      intronic
chr20:32101235(+) A-I      intronic
chr20:32231217(+) A-I      intronic
chr20:32098240(+) A-I      intronic
chr20:32231219(+) A-I      intronic
chr20:32231229(+) A-I      intronic
chr20:32231239(+) A-I      intronic
chr20:32143809(+) A-I      intronic
chr20:32234429(+) A-I      3'UTR
chr20:32234398(+) A-I      3'UTR
chr20:32231545(+) A-I      intronic
chr20:32231243(+) A-I      intronic
chr20:32231484(+) A-I      intronic
chr20:32143811(+) A-I      intronic
chr20:32143813(+) A-I      intronic
chr20:32143819(+) A-I      intronic
chr20:32231513(+) A-I      intronic
chr20:32231521(+) A-I      intronic
chr20:32220827(+) A-I      intronic
chr20:32220848(+) A-I      intronic
chr20:32100658(+) A-I      intronic
chr20:32235270(+) A-I      3'UTR
chr20:32235253(+) A-I      3'UTR
chr20:32234563(+) A-I      3'UTR
chr20:32220870(+) A-I      intronic
chr20:32234552(+) A-I      3'UTR
chr20:32220839(+) A-I      intronic
chr20:32220845(+) A-I      intronic
chr20:32234520(+) A-I      3'UTR
chr20:32222291(+) A-I      intronic
chr20:32222292(+) A-I      intronic
chr20:32219949(+) A-I      intronic
chr20:32220132(+) A-I      intronic
chr20:32220625(+) A-I      intronic
chr20:32220638(+) A-I      intronic
chr20:32220699(+) A-I      intronic
chr20:32220765(+) A-I      intronic
chr20:32220803(+) A-I      intronic
chr20:32220970(+) A-I      intronic
chr20:32220990(+) A-I      intronic
chr20:32220993(+) A-I      intronic
chr20:32221057(+) A-I      intronic
chr20:32221838(+) A-I      intronic
chr20:32221855(+) A-I      intronic
chr20:32221874(+) A-I      intronic
chr20:32107863(+) A-I      intronic
chr20:32221927(+) A-I      intronic
chr20:32221940(+) A-I      intronic
chr20:32221962(+) A-I      intronic
chr20:32221972(+) A-I      intronic
chr20:32222318(+) A-I      intronic
chr20:32222357(+) A-I      intronic
chr20:32222471(+) A-I      intronic
chr20:32223418(+) A-I      intronic
chr20:32223562(+) A-I      intronic
chr20:32223563(+) A-I      intronic
chr20:32223648(+) A-I      intronic
chr20:32229530(+) A-I      intronic
chr20:32229604(+) A-I      intronic
chr20:32230144(+) A-I      intronic
chr20:32230207(+) A-I      intronic
chr20:32107857(+) A-I      intronic
chr20:32107803(+) A-I      intronic
chr20:32107794(+) A-I      intronic
chr20:32107698(+) A-I      intronic
chr20:32107255(+) A-I      intronic
chr20:32107246(+) A-I      intronic
chr20:32106727(+) A-I      intronic
chr20:32106679(+) A-I      intronic
chr20:32106647(+) A-I      intronic
chr20:32106558(+) A-I      intronic
chr20:32106458(+) A-I      intronic
chr20:32106431(+) A-I      intronic
chr20:32106330(+) A-I      intronic
chr20:32106320(+) A-I      intronic
chr20:32105884(+) A-I      intronic
chr20:32105724(+) A-I      intronic
chr20:32105616(+) A-I      intronic
chr20:32105555(+) A-I      intronic
chr20:32105554(+) A-I      intronic
chr20:32105550(+) A-I      intronic
chr20:32105444(+) A-I      intronic
chr20:32104369(+) A-I      intronic
chr20:32104355(+) A-I      intronic
chr20:32104075(+) A-I      intronic
chr20:32103836(+) A-I      intronic
chr20:32103785(+) A-I      intronic
chr20:32103446(+) A-I      intronic
chr20:32116555(+) A-I      intronic
chr20:32116581(+) A-I      intronic
chr20:32103145(+) A-I      intronic
chr20:32103144(+) A-I      intronic
chr20:32103042(+) A-I      intronic
chr20:32103026(+) A-I      intronic
chr20:32102759(+) A-I      intronic
chr20:32102728(+) A-I      intronic
chr20:32102596(+) A-I      intronic
chr20:32102204(+) A-I      intronic
chr20:32102052(+) A-I      intronic
chr20:32101983(+) A-I      intronic
chr20:32101931(+) A-I      intronic
chr20:32101836(+) A-I      intronic
chr20:32101833(+) A-I      intronic
chr20:32101819(+) A-I      intronic
chr20:32101811(+) A-I      intronic
chr20:32101608(+) A-I      intronic
chr20:32101569(+) A-I      intronic
chr20:32101561(+) A-I      intronic
chr20:32101552(+) A-I      intronic
chr20:32101429(+) A-I      intronic
chr20:32101240(+) A-I      intronic
chr20:32100819(+) A-I      intronic
chr20:32100805(+) A-I      intronic
chr20:32100740(+) A-I      intronic
chr20:32100720(+) A-I      intronic
chr20:32100106(+) A-I      intronic
chr20:32100072(+) A-I      intronic
chr20:32099862(+) A-I      intronic
chr20:32099831(+) A-I      intronic
chr20:32099823(+) A-I      intronic
chr20:32099821(+) A-I      intronic
chr20:32216344(+) A-I      intronic
chr20:32216834(+) A-I      intronic
chr20:32216838(+) A-I      intronic
chr20:32218896(+) A-I      intronic
chr20:32099792(+) A-I      intronic
chr20:32099610(+) A-I      intronic
chr20:32116895(+) A-I      intronic
chr20:32116896(+) A-I      intronic
chr20:32116901(+) A-I      intronic
chr20:32117038(+) A-I      intronic
chr20:32117042(+) A-I      intronic
chr20:32117293(+) A-I      intronic
chr20:32117315(+) A-I      intronic
chr20:32117316(+) A-I      intronic
chr20:32117321(+) A-I      intronic
chr20:32098121(+) A-I      intronic
chr20:32097623(+) A-I      intronic
chr20:32097622(+) A-I      intronic
chr20:32097496(+) A-I      intronic
chr20:32097479(+) A-I      intronic
chr20:32097424(+) A-I      intronic
chr20:32097022(+) A-I      intronic
chr20:32096948(+) A-I      intronic
chr20:32096135(+) A-I      intronic
chr20:32096121(+) A-I      intronic
chr20:32096066(+) A-I      intronic
chr20:32096040(+) A-I      intronic
chr20:32096026(+) A-I      intronic
chr20:32095949(+) A-I      intronic
chr20:32095934(+) A-I      intronic
chr20:32093940(+) A-I      intronic
chr20:32093502(+) A-I      intronic
chr20:32093480(+) A-I      intronic
chr20:32093440(+) A-I      intronic
chr20:32093435(+) A-I      intronic
chr20:32093434(+) A-I      intronic
chr20:32090734(+) A-I      intronic
chr20:32090724(+) A-I      intronic
chr20:32090394(+) A-I      intronic
chr20:32090391(+) A-I      intronic
chr20:32090375(+) A-I      intronic
chr20:32090292(+) A-I      intronic
chr20:32088478(+) A-I      intronic
chr20:32088447(+) A-I      intronic
chr20:32088435(+) A-I      intronic
chr20:32087905(+) A-I      intronic
chr20:32087881(+) A-I      intronic
chr20:32087868(+) A-I      intronic
chr20:32087858(+) A-I      intronic
chr20:32087845(+) A-I      intronic
chr20:32086805(+) A-I      intronic
chr20:32086224(+) A-I      intronic
chr20:32086183(+) A-I      intronic
chr20:32085767(+) A-I      intronic
chr20:32085614(+) A-I      intronic
chr20:32085536(+) A-I      intronic
chr20:32085522(+) A-I      intronic
chr20:32085517(+) A-I      intronic
chr20:32085503(+) A-I      intronic
chr20:32085379(+) A-I      intronic
chr20:32084825(+) A-I      intronic
chr20:32084824(+) A-I      intronic
chr20:32083331(+) A-I      intronic
chr20:32083027(+) A-I      intronic
chr20:32083020(+) A-I      intronic
chr20:32083011(+) A-I      intronic
chr20:32083005(+) A-I      intronic
chr20:32082930(+) A-I      intronic
chr20:32082531(+) A-I      intronic
chr20:32081950(+) A-I      intronic
chr20:32080593(+) A-I      intronic
chr20:32080556(+) A-I      intronic
chr20:32080555(+) A-I      intronic
chr20:32080407(+) A-I      intronic
chr20:32080397(+) A-I      intronic
chr20:32079949(+) A-I      intronic
chr20:32079948(+) A-I      intronic
chr20:32079828(+) A-I      intronic
chr20:32079806(+) A-I      intronic
chr20:32079789(+) A-I      intronic
chr20:32079751(+) A-I      intronic
chr20:32079742(+) A-I      intronic
chr20:32079608(+) A-I      intronic
chr20:32079534(+) A-I      intronic
chr20:32218935(+) A-I      intronic
chr20:32218977(+) A-I      intronic
chr20:32219009(+) A-I      intronic
chr20:32219022(+) A-I      intronic
chr20:32219936(+) A-I      intronic
chr20:32221879(+) A-I      intronic
chr20:32130619(+) A-I      intronic
chr20:32080406(+) A-I      intronic
chr20:32113527(+) A-I      intronic
chr20:32113730(+) A-I      intronic
chr20:32113497(+) A-I      intronic
chr20:32111186(+) A-I      intronic
chr20:32111185(+) A-I      intronic
chr20:32110490(+) A-I      intronic
chr20:32110483(+) A-I      intronic
chr20:32108564(+) A-I      intronic
chr20:32108563(+) A-I      intronic
chr20:32108395(+) A-I      intronic
chr20:32108391(+) A-I      intronic
chr20:32108377(+) A-I      intronic
chr20:32108343(+) A-I      intronic
chr20:32107883(+) A-I      intronic
chr20:32107872(+) A-I      intronic
chr20:32117397(+) A-I      intronic
chr20:32118389(+) A-I      intronic
chr20:32118406(+) A-I      intronic
chr20:32118408(+) A-I      intronic
chr20:32118454(+) A-I      intronic
chr20:32118480(+) A-I      intronic
chr20:32118481(+) A-I      intronic
chr20:32118631(+) A-I      intronic
chr20:32118632(+) A-I      intronic
chr20:32118697(+) A-I      intronic
chr20:32118701(+) A-I      intronic
chr20:32118710(+) A-I      intronic
chr20:32118722(+) A-I      intronic
chr20:32118730(+) A-I      intronic
chr20:32118734(+) A-I      intronic
chr20:32121580(+) A-I      intronic
chr20:32121597(+) A-I      intronic
chr20:32121849(+) A-I      intronic
chr20:32130595(+) A-I      intronic
chr20:32130643(+) A-I      intronic
chr20:32130733(+) A-I      intronic
chr20:32130920(+) A-I      intronic
chr20:32130923(+) A-I      intronic
chr20:32134332(+) A-I      intronic
chr20:32134338(+) A-I      intronic
chr20:32134342(+) A-I      intronic
chr20:32134535(+) A-I      intronic
chr20:32134553(+) A-I      intronic
chr20:32134751(+) A-I      intronic
chr20:32134752(+) A-I      intronic
chr20:32134783(+) A-I      intronic
chr20:32134985(+) A-I      intronic
chr20:32135125(+) A-I      intronic
chr20:32135170(+) A-I      intronic
chr20:32135336(+) A-I      intronic
chr20:32135361(+) A-I      intronic
chr20:32135838(+) A-I      intronic
chr20:32136651(+) A-I      intronic
chr20:32136682(+) A-I      intronic
chr20:32136711(+) A-I      intronic
chr20:32152515(+) A-I      intronic
chr20:32152666(+) A-I      intronic
chr20:32154150(+) A-I      intronic
chr20:32154226(+) A-I      intronic
chr20:32154252(+) A-I      intronic
chr20:32154260(+) A-I      intronic
chr20:32154265(+) A-I      intronic
chr20:32154281(+) A-I      intronic
chr20:32154291(+) A-I      intronic
chr20:32154318(+) A-I      intronic
chr20:32161357(+) A-I      intronic
chr20:32161387(+) A-I      intronic
chr20:32161388(+) A-I      intronic
chr20:32161392(+) A-I      intronic
chr20:32161413(+) A-I      intronic
chr20:32161554(+) A-I      intronic
chr20:32161560(+) A-I      intronic
chr20:32162198(+) A-I      intronic
chr20:32162209(+) A-I      intronic
chr20:32162274(+) A-I      intronic
chr20:32162284(+) A-I      intronic
chr20:32162300(+) A-I      intronic
chr20:32162381(+) A-I      intronic
chr20:32163607(+) A-I      intronic
chr20:32163648(+) A-I      intronic
chr20:32163778(+) A-I      intronic
chr20:32168470(+) A-I      intronic
chr20:32168515(+) A-I      intronic
chr20:32168527(+) A-I      intronic
chr20:32168552(+) A-I      intronic
chr20:32168639(+) A-I      intronic
chr20:32168956(+) A-I      intronic
chr20:32168969(+) A-I      intronic
chr20:32169004(+) A-I      intronic
chr20:32170084(+) A-I      intronic
chr20:32170196(+) A-I      intronic
chr20:32170206(+) A-I      intronic
chr20:32170420(+) A-I      intronic
chr20:32170425(+) A-I      intronic
chr20:32170561(+) A-I      intronic
chr20:32170627(+) A-I      intronic
chr20:32170628(+) A-I      intronic
chr20:32170654(+) A-I      intronic
chr20:32172007(+) A-I      intronic
chr20:32172016(+) A-I      intronic
chr20:32172198(+) A-I      intronic
chr20:32172201(+) A-I      intronic
chr20:32174078(+) A-I      intronic
chr20:32174102(+) A-I      intronic
chr20:32174202(+) A-I      intronic
chr20:32174841(+) A-I      intronic
chr20:32174865(+) A-I      intronic
chr20:32174979(+) A-I      intronic
chr20:32174988(+) A-I      intronic
chr20:32174989(+) A-I      intronic
chr20:32175024(+) A-I      intronic
chr20:32175153(+) A-I      intronic
chr20:32175283(+) A-I      intronic
chr20:32175332(+) A-I      intronic
chr20:32175333(+) A-I      intronic
chr20:32175348(+) A-I      intronic
chr20:32175457(+) A-I      intronic
chr20:32175485(+) A-I      intronic
chr20:32178752(+) A-I      intronic
chr20:32178865(+) A-I      intronic
chr20:32178920(+) A-I      intronic
chr20:32179028(+) A-I      intronic
chr20:32181279(+) A-I      intronic
chr20:32181316(+) A-I      intronic
chr20:32181325(+) A-I      intronic
chr20:32181328(+) A-I      intronic
chr20:32181428(+) A-I      intronic
chr20:32183422(+) A-I      intronic
chr20:32183432(+) A-I      intronic
chr20:32183435(+) A-I      intronic
chr20:32184792(+) A-I      intronic
chr20:32184872(+) A-I      intronic
chr20:32184877(+) A-I      intronic
chr20:32184880(+) A-I      intronic
chr20:32184990(+) A-I      intronic
chr20:32189171(+) A-I      intronic
chr20:32189197(+) A-I      intronic
chr20:32189200(+) A-I      intronic
chr20:32189210(+) A-I      intronic
chr20:32189323(+) A-I      intronic
chr20:32189332(+) A-I      intronic
chr20:32189333(+) A-I      intronic
chr20:32199549(+) A-I      intronic
chr20:32199559(+) A-I      intronic
chr20:32200764(+) A-I      intronic
chr20:32204355(+) A-I      intronic
chr20:32204362(+) A-I      intronic
chr20:32204406(+) A-I      intronic
chr20:32204488(+) A-I      intronic
chr20:32209131(+) A-I      intronic
chr20:32209232(+) A-I      intronic
chr20:32211278(+) A-I      intronic
chr20:32211311(+) A-I      intronic
chr20:32211316(+) A-I      intronic
chr20:32211411(+) A-I      intronic
chr20:32211418(+) A-I      intronic
chr20:32211448(+) A-I      intronic
chr20:32211463(+) A-I      intronic
chr20:32234657(+) A-I      3'UTR
chr20:32234039(+) A-I      3'UTR
chr20:32234540(+) A-I      3'UTR
chr20:32234509(+) A-I      3'UTR
chr20:32234466(+) A-I      3'UTR
chr20:32234452(+) A-I      3'UTR
chr20:32234390(+) A-I      3'UTR
chr20:32234066(+) A-I      3'UTR
chr20:32233890(+) A-I      3'UTR
chr20:32234007(+) A-I      3'UTR
chr20:32233999(+) A-I      3'UTR
chr20:32233971(+) A-I      3'UTR
chr20:32233914(+) A-I      3'UTR
chr20:32233884(+) A-I      3'UTR
chr20:32235361(+) A-I      3'UTR
chr20:32235299(+) A-I      3'UTR
chr20:32235252(+) A-I      3'UTR
chr20:32234683(+) A-I      3'UTR
chr20:32220963(+) A-I      intronic
chr20:32081790(+) A-I      intronic
chr20:32135376(+) A-I      intronic
chr20:32082498(+) A-I      intronic
chr20:32172017(+) A-I      intronic
chr20:32105385(+) A-I      intronic
chr20:32231126(+) A-I      intronic
chr20:32108497(+) A-I      intronic
chr20:32118860(+) A-I      intronic
chr20:32118711(+) A-I      intronic
chr20:32100063(+) A-I      intronic
chr20:32213110(+) A-I      intronic
chr20:32223424(+) A-I      intronic
chr20:32170215(+) A-I      intronic
chr20:32168504(+) A-I      intronic
chr20:32102603(+) A-I      intronic
chr20:32204448(+) A-I      intronic
chr20:32107938(+) A-I      intronic
chr20:32179189(+) A-I      intronic
chr20:32105304(+) A-I      intronic
chr20:32102201(+) A-I      intronic
chr20:32174085(+) A-I      intronic
chr20:32097130(+) A-I      intronic
chr20:32168511(+) A-I      intronic
chr20:32174827(+) A-I      intronic
chr20:32083137(+) A-I      intronic
chr20:32102642(+) A-I      intronic
chr20:32204390(+) A-I      intronic
chr20:32104215(+) A-I      intronic
chr20:32216856(+) A-I      intronic
chr20:32134350(+) A-I      intronic
chr20:32118871(+) A-I      intronic
chr20:32098239(+) A-I      intronic
chr20:32206990(+) A-I      intronic
chr20:32181268(+) A-I      intronic
chr20:32083238(+) A-I      intronic
chr20:32179032(+) A-I      intronic
chr20:32102121(+) A-I      intronic
chr20:32096966(+) A-I      intronic
chr20:32089708(+) A-I      intronic
chr20:32101607(+) A-I      intronic
chr20:32221165(+) A-I      intronic
chr20:32204989(+) A-I      intronic
chr20:32229990(+) A-I      intronic
chr20:32130539(+) A-I      intronic
chr20:32219108(+) A-I      intronic
chr20:32104066(+) A-I      intronic
chr20:32100037(+) A-I      intronic
chr20:32087820(+) A-I      intronic
chr20:32218871(+) A-I      intronic
chr20:32222319(+) A-I      intronic
chr20:32110427(+) A-I      intronic
chr20:32110524(+) A-I      intronic
chr20:32118255(+) A-I      intronic
chr20:32145522(+) A-I      intronic
chr20:32098146(+) A-I      intronic
chr20:32135342(+) A-I      intronic
chr20:32118384(+) A-I      intronic
chr20:32107906(+) A-I      intronic
chr20:32199422(+) A-I      intronic
chr20:32220967(+) A-I      intronic
chr20:32186947(+) A-I      intronic
chr20:32102964(+) A-I      intronic
chr20:32105939(+) A-I      intronic
chr20:32086461(+) A-I      intronic
chr20:32161726(+) A-I      intronic
chr20:32098081(+) A-I      intronic
chr20:32088315(+) A-I      intronic
chr20:32097085(+) A-I      intronic
chr20:32099827(+) A-I      intronic
chr20:32208443(+) A-I      intronic
chr20:32133436(+) A-I      intronic
chr20:32107802(+) A-I      intronic
chr20:32121752(+) A-I      intronic
chr20:32177973(+) A-I      intronic
chr20:32101266(+) A-I      intronic
chr20:32097021(+) A-I      intronic
chr20:32176567(+) A-I      intronic
chr20:32090351(+) A-I      intronic
chr20:32219908(+) A-I      intronic
chr20:32090641(+) A-I      intronic
chr20:32135380(+) A-I      intronic
chr20:32081921(+) A-I      intronic
chr20:32080742(+) A-I      intronic
chr20:32230066(+) A-I      intronic
chr20:32108430(+) A-I      intronic
chr20:32161427(+) A-I      intronic
chr20:32092339(+) A-I      intronic
chr20:32111150(+) A-I      intronic
chr20:32161720(+) A-I      intronic
chr20:32090349(+) A-I      intronic
chr20:32118834(+) A-I      intronic
chr20:32110300(+) A-I      intronic
chr20:32097020(+) A-I      intronic
chr20:32097488(+) A-I      intronic
chr20:32097482(+) A-I      intronic
chr20:32219979(+) A-I      intronic
chr20:32087903(+) A-I      intronic
chr20:32097556(+) A-I      intronic
chr20:32103456(+) A-I      intronic
chr20:32097052(+) A-I      intronic
chr20:32162311(+) A-I      intronic
chr20:32085406(+) A-I      intronic
chr20:32079818(+) A-I      intronic
chr20:32101307(+) A-I      intronic
chr20:32231603(+) A-I      intronic
chr20:32099825(+) A-I      intronic
chr20:32213182(+) A-I      intronic
chr20:32102098(+) A-I      intronic
chr20:32201839(+) A-I      intronic
chr20:32097514(+) A-I      intronic
chr20:32225983(+) A-I      intronic
chr20:32130590(+) A-I      intronic
chr20:32092432(+) A-I      intronic
chr20:32085757(+) A-I      intronic
chr20:32180991(+) A-I      intronic
chr20:32080425(+) A-I      intronic
chr20:32226042(+) A-I      intronic
chr20:32121661(+) A-I      intronic
chr20:32222409(+) A-I      intronic
chr20:32100765(+) A-I      intronic
chr20:32167760(+) A-I      intronic
chr20:32221027(+) A-I      intronic
chr20:32079870(+) A-I      intronic
chr20:32118686(+) A-I      intronic
chr20:32222223(+) A-I      intronic
chr20:32220921(+) A-I      intronic
chr20:32227590(+) A-I      intronic
chr20:32112694(+) A-I      intronic
chr20:32135402(+) A-I      intronic
chr20:32101500(+) A-I      intronic
chr20:32093641(+) A-I      intronic
chr20:32086791(+) A-I      intronic
chr20:32213051(+) A-I      intronic
chr20:32083449(+) A-I      intronic
chr20:32211338(+) A-I      intronic
chr20:32083033(+) A-I      intronic
chr20:32107218(+) A-I      intronic
chr20:32102122(+) A-I      intronic
chr20:32089468(+) A-I      intronic
chr20:32168478(+) A-I      intronic
chr20:32097118(+) A-I      intronic
chr20:32136494(+) A-I      intronic
chr20:32103107(+) A-I      intronic
chr20:32113489(+) A-I      intronic
chr20:32223555(+) A-I      intronic
chr20:32198116(+) A-I      intronic
chr20:32100725(+) A-I      intronic
chr20:32220375(+) A-I      intronic
chr20:32117438(+) A-I      intronic
chr20:32186989(+) A-I      intronic
chr20:32122258(+) A-I      intronic
chr20:32221904(+) A-I      intronic
chr20:32105894(+) A-I      intronic
chr20:32090750(+) A-I      intronic
chr20:32102528(+) A-I      intronic
chr20:32205015(+) A-I      intronic
chr20:32121642(+) A-I      intronic
chr20:32117337(+) A-I      intronic
chr20:32089575(+) A-I      intronic
chr20:32081145(+) A-I      intronic
chr20:32230179(+) A-I      intronic
chr20:32098156(+) A-I      intronic
chr20:32227683(+) A-I      intronic
chr20:32082463(+) A-I      intronic
chr20:32080811(+) A-I      intronic
chr20:32111751(+) A-I      intronic
chr20:32231591(+) A-I      intronic
chr20:32231599(+) A-I      intronic
chr20:32220112(+) A-I      intronic
chr20:32231589(+) A-I      intronic
chr20:32231593(+) A-I      intronic
chr20:32231607(+) A-I      intronic
chr20:32231587(+) A-I      intronic
chr20:32231585(+) A-I      intronic
chr20:32231611(+) A-I      intronic
chr20:32176544(+) A-I      intronic
chr20:32231601(+) A-I      intronic
chr20:32231595(+) A-I      intronic
chr20:32086706(+) A-I      intronic
chr20:32231605(+) A-I      intronic
chr20:32086774(+) A-I      intronic
chr20:32231613(+) A-I      intronic
chr20:32085414(+) A-I      intronic
chr20:32231615(+) A-I      intronic
chr20:32099985(+) A-I      intronic
chr20:32231619(+) A-I      intronic
chr20:32231597(+) A-I      intronic
chr20:32092384(+) A-I      intronic
chr20:32231609(+) A-I      intronic
chr20:32231617(+) A-I      intronic
chr20:32081784(+) A-I      intronic
chr20:32118844(+) A-I      intronic
chr20:32103432(+) A-I      intronic
chr20:32181338(+) A-I      intronic
chr20:32121710(+) A-I      intronic
chr20:32083351(+) A-I      intronic
chr20:32170133(+) A-I      intronic
chr20:32096987(+) A-I      intronic
chr20:32099675(+) A-I      intronic
chr20:32225964(+) A-I      intronic
chr20:32116619(+) A-I      intronic
chr20:32113650(+) A-I      intronic
chr20:32233910(+) A-I      3'UTR
chr20:32235191(+) A-I      3'UTR
chr20:32235277(+) A-I      3'UTR
chr20:32234080(+) A-I      3'UTR
chr20:32235232(+) A-I      3'UTR
chr20:32233927(+) A-I      3'UTR
chr20:32234588(+) A-I      3'UTR
chr20:32234019(+) A-I      3'UTR
chr20:32233841(+) A-I      3'UTR
chr20:32234486(+) A-I      3'UTR
chr20:32234433(+) A-I      3'UTR
chr20:32235171(+) A-I      3'UTR
chr20:32235351(+) A-I      3'UTR
chr20:32234536(+) A-I      3'UTR
chr20:32234556(+) A-I      3'UTR
chr20:32234423(+) A-I      3'UTR
chr20:32234656(+) A-I      3'UTR
chr20:32234010(+) A-I      3'UTR
chr20:32235155(+) A-I      3'UTR
chr20:32233828(+) A-I      3'UTR
chr20:32235110(+) A-I      3'UTR
chr20:32233834(+) A-I      3'UTR
chr20:32234546(+) A-I      3'UTR
chr20:32235236(+) A-I      3'UTR
chr20:32235310(+) A-I      3'UTR
chr20:32235358(+) A-I      3'UTR
chr20:32234407(+) A-I      3'UTR
chr20:32234599(+) A-I      3'UTR
chr20:32235273(+) A-I      3'UTR
chr20:32234025(+) A-I      3'UTR
chr20:32233939(+) A-I      3'UTR
chr20:32235329(+) A-I      3'UTR
chr20:32234579(+) A-I      3'UTR
chr20:32235256(+) A-I      3'UTR
chr20:32234456(+) A-I      3'UTR
chr20:32234507(+) A-I      3'UTR
chr20:32233990(+) A-I      3'UTR
chr20:32234476(+) A-I      3'UTR
chr20:32234547(+) A-I      3'UTR
chr20:32235337(+) A-I      3'UTR
chr20:32234574(+) A-I      3'UTR
chr20:32234083(+) A-I      3'UTR
chr20:32234587(+) A-I      3'UTR
chr20:32234467(+) A-I      3'UTR
chr20:32234068(+) A-I      3'UTR
chr20:32235220(+) A-I      3'UTR
chr20:32135367(+) A-I      intronic
chr20:32103496(+) A-I      intronic
chr20:32168617(+) A-I      intronic
chr20:32094015(+) A-I      intronic
chr20:32099830(+) A-I      intronic
chr20:32199451(+) A-I      intronic
chr20:32098224(+) A-I      intronic
chr20:32118363(+) A-I      intronic
chr20:32117396(+) A-I      intronic
chr20:32175012(+) A-I      intronic
chr20:32187481(+) A-I      intronic
chr20:32097012(+) A-I      intronic
chr20:32088394(+) A-I      intronic
chr20:32204413(+) A-I      intronic
chr20:32159798(+) A-I      intronic
chr20:32133354(+) A-I      intronic
chr20:32099836(+) A-I      intronic
chr20:32221955(+) A-I      intronic
chr20:32219989(+) A-I      intronic
chr20:32230212(+) A-I      intronic
chr20:32103448(+) A-I      intronic
chr20:32136578(+) A-I      intronic
chr20:32118876(+) A-I      intronic
chr20:32106455(+) A-I      intronic
chr20:32115071(+) A-I      intronic
chr20:32102160(+) A-I      intronic
chr20:32106728(+) A-I      intronic
chr20:32099967(+) A-I      intronic
chr20:32231127(+) A-I      intronic
chr20:32134341(+) A-I      intronic
chr20:32083048(+) A-I      intronic
chr20:32220691(+) A-I      intronic
chr20:32181433(+) A-I      intronic
chr20:32209311(+) A-I      intronic
chr20:32103487(+) A-I      intronic
chr20:32105635(+) A-I      intronic
chr20:32185506(+) A-I      intronic
chr20:32220079(+) A-I      intronic
chr20:32219912(+) A-I      intronic
chr20:32227576(+) A-I      intronic
chr20:32101526(+) A-I      intronic
chr20:32101259(+) A-I      intronic
chr20:32229603(+) A-I      intronic
chr20:32218933(+) A-I      intronic
chr20:32219877(+) A-I      intronic
chr20:32200789(+) A-I      intronic
chr20:32083377(+) A-I      intronic
chr20:32101509(+) A-I      intronic
chr20:32081776(+) A-I      intronic
chr20:32221098(+) A-I      intronic
chr20:32083117(+) A-I      intronic
chr20:32179956(+) A-I      intronic
chr20:32099924(+) A-I      intronic
chr20:32152433(+) A-I      intronic
chr20:32107156(+) A-I      intronic
chr20:32088260(+) A-I      intronic
chr20:32080703(+) A-I      intronic
chr20:32223601(+) A-I      intronic
chr20:32106467(+) A-I      intronic
chr20:32079745(+) A-I      intronic
chr20:32080794(+) A-I      intronic
chr20:32208104(+) A-I      intronic
chr20:32083174(+) A-I      intronic
chr20:32106649(+) A-I      intronic
chr20:32088265(+) A-I      intronic
chr20:32103804(+) A-I      intronic
chr20:32136665(+) A-I      intronic
chr20:32103514(+) A-I      intronic
chr20:32082964(+) A-I      intronic
chr20:32097448(+) A-I      intronic
chr20:32211223(+) A-I      intronic
chr20:32204422(+) A-I      intronic
chr20:32229985(+) A-I      intronic
chr20:32100036(+) A-I      intronic
chr20:32229997(+) A-I      intronic
chr20:32087893(+) A-I      intronic
chr20:32201837(+) A-I      intronic
chr20:32219102(+) A-I      intronic
chr20:32101541(+) A-I      intronic
chr20:32098183(+) A-I      intronic
chr20:32222282(+) A-I      intronic
chr20:32221015(+) A-I      intronic
chr20:32168615(+) A-I      intronic
chr20:32201830(+) A-I      intronic
chr20:32086530(+) A-I      intronic
chr20:32083306(+) A-I      intronic
chr20:32220694(+) A-I      intronic
chr20:32231468(+) A-I      intronic
chr20:32227545(+) A-I      intronic
chr20:32221828(+) A-I      intronic
chr20:32229617(+) A-I      intronic
chr20:32101188(+) A-I      intronic
chr20:32221044(+) A-I      intronic
chr20:32088395(+) A-I      intronic
chr20:32097123(+) A-I      intronic
chr20:32096963(+) A-I      intronic
chr20:32079950(+) A-I      intronic
chr20:32085433(+) A-I      intronic
chr20:32126358(+) A-I      intronic
chr20:32093633(+) A-I      intronic
chr20:32089830(+) A-I      intronic
chr20:32118809(+) A-I      intronic
chr20:32222322(+) A-I      intronic
chr20:32085495(+) A-I      intronic
chr20:32081955(+) A-I      intronic
chr20:32201843(+) A-I      intronic
chr20:32230420(+) A-I      intronic
chr20:32088035(+) A-I      intronic
chr20:32083070(+) A-I      intronic
chr20:32099774(+) A-I      intronic
chr20:32135383(+) A-I      intronic
chr20:32103450(+) A-I      intronic
chr20:32108322(+) A-I      intronic
chr20:32103001(+) A-I      intronic
chr20:32168970(+) A-I      intronic
chr20:32086199(+) A-I      intronic
chr20:32098182(+) A-I      intronic
chr20:32107806(+) A-I      intronic
chr20:32106745(+) A-I      intronic
chr20:32143783(+) A-I      intronic
chr20:32083051(+) A-I      intronic
chr20:32079962(+) A-I      intronic
chr20:32106753(+) A-I      intronic
chr20:32222302(+) A-I      intronic
chr20:32083094(+) A-I      intronic
chr20:32230153(+) A-I      intronic
chr20:32087948(+) A-I      intronic
chr20:32181344(+) A-I      intronic
chr20:32096163(+) A-I      intronic
chr20:32086839(+) A-I      intronic
chr20:32207084(+) A-I      intronic
chr20:32080531(+) A-I      intronic
chr20:32087839(+) A-I      intronic
chr20:32231324(+) A-I      intronic
chr20:32118801(+) A-I      intronic
chr20:32222320(+) A-I      intronic
chr20:32207110(+) A-I      intronic
chr20:32222331(+) A-I      intronic
chr20:32231275(+) A-I      intronic
chr20:32105718(+) A-I      intronic
chr20:32208200(+) A-I      intronic
chr20:32222379(+) A-I      intronic
chr20:32085388(+) A-I      intronic
chr20:32101472(+) A-I      intronic
chr20:32211413(+) A-I      intronic
chr20:32086742(+) A-I      intronic
chr20:32185511(+) A-I      intronic
chr20:32103702(+) A-I      intronic
chr20:32170697(+) A-I      intronic
chr20:32113562(+) A-I      intronic
chr20:32172184(+) A-I      intronic
chr20:32176623(+) A-I      intronic
chr20:32103046(+) A-I      intronic
chr20:32122195(+) A-I      intronic
chr20:32101580(+) A-I      intronic
chr20:32176498(+) A-I      intronic
chr20:32213496(+) A-I      intronic
chr20:32134820(+) A-I      intronic
chr20:32199541(+) A-I      intronic
chr20:32085616(+) A-I      intronic
chr20:32199425(+) A-I      intronic
chr20:32105608(+) A-I      intronic
chr20:32080793(+) A-I      intronic
chr20:32083387(+) A-I      intronic
chr20:32220668(+) A-I      intronic
chr20:32208243(+) A-I      intronic
chr20:32220658(+) A-I      intronic
chr20:32105311(+) A-I      intronic
chr20:32121634(+) A-I      intronic
chr20:32084972(+) A-I      intronic
chr20:32221959(+) A-I      intronic
chr20:32154180(+) A-I      intronic
chr20:32181278(+) A-I      intronic
chr20:32170448(+) A-I      intronic
chr20:32096136(+) A-I      intronic
chr20:32211351(+) A-I      intronic
chr20:32208272(+) A-I      intronic
chr20:32231343(+) A-I      intronic
chr20:32080833(+) A-I      intronic
chr20:32231283(+) A-I      intronic
chr20:32118755(+) A-I      intronic
chr20:32107169(+) A-I      intronic
chr20:32085024(+) A-I      intronic
chr20:32208555(+) A-I      intronic
chr20:32221031(+) A-I      intronic
chr20:32103822(+) A-I      intronic
chr20:32213499(+) A-I      intronic
chr20:32217943(+) A-I      intronic
chr20:32231220(+) A-I      intronic
chr20:32222276(+) A-I      intronic
chr20:32106732(+) A-I      intronic
chr20:32085972(+) A-I      intronic
chr20:32091290(+) A-I      intronic
chr20:32222366(+) A-I      intronic
chr20:32084968(+) A-I      intronic
chr20:32223578(+) A-I      intronic
chr20:32096917(+) A-I      intronic
chr20:32213654(+) A-I      intronic
chr20:32083113(+) A-I      intronic
chr20:32100659(+) A-I      intronic
chr20:32082988(+) A-I      intronic
chr20:32085615(+) A-I      intronic
chr20:32100724(+) A-I      intronic
chr20:32170614(+) A-I      intronic
chr20:32084981(+) A-I      intronic
chr20:32177900(+) A-I      intronic
chr20:32096148(+) A-I      intronic
chr20:32221914(+) A-I      intronic
chr20:32097498(+) A-I      intronic
chr20:32223403(+) A-I      intronic
chr20:32081961(+) A-I      intronic
chr20:32106758(+) A-I      intronic
chr20:32093750(+) A-I      intronic
chr20:32219878(+) A-I      intronic
chr20:32083026(+) A-I      intronic
chr20:32220730(+) A-I      intronic
chr20:32231522(+) A-I      intronic
chr20:32099971(+) A-I      intronic
chr20:32082361(+) A-I      intronic
chr20:32231172(+) A-I      intronic
chr20:32091298(+) A-I      intronic
chr20:32216843(+) A-I      intronic
chr20:32221067(+) A-I      intronic
chr20:32107111(+) A-I      intronic
chr20:32134899(+) A-I      intronic
chr20:32105961(+) A-I      intronic
chr20:32117105(+) A-I      intronic
chr20:32220596(+) A-I      intronic
chr20:32172029(+) A-I      intronic
chr20:32223971(+) A-I      intronic
chr20:32229045(+) A-I      intronic
chr20:32220050(+) A-I      intronic
chr20:32081884(+) A-I      intronic
chr20:32170371(+) A-I      intronic
chr20:32222327(+) A-I      intronic
chr20:32096918(+) A-I      intronic
chr20:32105855(+) A-I      intronic
chr20:32090327(+) A-I      intronic
chr20:32231498(+) A-I      intronic
chr20:32132614(+) A-I      intronic
chr20:32106402(+) A-I      intronic
chr20:32111166(+) A-I      intronic
chr20:32118005(+) A-I      intronic
chr20:32118247(+) A-I      intronic
chr20:32097515(+) A-I      intronic
chr20:32086184(+) A-I      intronic
chr20:32097062(+) A-I      intronic
chr20:32230082(+) A-I      intronic
chr20:32174933(+) A-I      intronic
chr20:32171847(+) A-I      intronic
chr20:32118249(+) A-I      intronic
chr20:32083098(+) A-I      intronic
chr20:32107840(+) A-I      intronic
chr20:32170402(+) A-I      intronic
chr20:32101889(+) A-I      intronic
chr20:32087851(+) A-I      intronic
chr20:32170510(+) A-I      intronic
chr20:32102709(+) A-I      intronic
chr20:32200691(+) A-I      intronic
chr20:32097459(+) A-I      intronic
chr20:32170147(+) A-I      intronic
chr20:32118817(+) A-I      intronic
chr20:32171815(+) A-I      intronic
chr20:32097148(+) A-I      intronic
chr20:32221980(+) A-I      intronic
chr20:32213063(+) A-I      intronic
chr20:32085485(+) A-I      intronic
chr20:32122274(+) A-I      intronic
chr20:32177929(+) A-I      intronic
chr20:32223951(+) A-I      intronic
chr20:32143784(+) A-I      intronic
chr20:32097484(+) A-I      intronic
chr20:32122354(+) A-I      intronic
chr20:32222397(+) A-I      intronic
chr20:32199488(+) A-I      intronic
chr20:32170514(+) A-I      intronic
chr20:32204324(+) A-I      intronic
chr20:32208388(+) A-I      intronic
chr20:32167897(+) A-I      intronic
chr20:32199521(+) A-I      intronic
chr20:32118244(+) A-I      intronic
chr20:32170249(+) A-I      intronic
chr20:32204412(+) A-I      intronic
chr20:32223899(+) A-I      intronic
chr20:32103570(+) A-I      intronic
chr20:32086215(+) A-I      intronic
chr20:32111085(+) A-I      intronic
chr20:32087865(+) A-I      intronic
chr20:32162383(+) A-I      intronic
chr20:32199461(+) A-I      intronic
chr20:32097542(+) A-I      intronic
chr20:32199504(+) A-I      intronic
chr20:32127562(+) A-I      intronic
chr20:32080705(+) A-I      intronic
chr20:32229506(+) A-I      intronic
chr20:32099998(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CBFA2T2
chr20:32233841(+) A-I exon 3'UTR    15258596   //21960545
chr20:32233993(+) A-I exon 3'UTR    15258596
chr20:32234067(+) A-I exon 3'UTR    15258596
chr20:32234068(+) A-I exon 3'UTR    15258596   //21960545
chr20:32234352(+) A-I exon 3'UTR    19478186
chr20:32234505(+) A-I exon 3'UTR    15258596
chr20:32235190(+) A-I exon 3'UTR    15342557   //15258596
chr20:32235191(+) A-I exon 3'UTR    15342557   //15258596
chr20:32235220(+) A-I exon 3'UTR    15258596
chr20:32235230(+) A-I exon 3'UTR    15342557   //15258596
chr20:32235236(+) A-I exon 3'UTR    15258596
chr20:32235256(+) A-I exon 3'UTR    15342557   //15258596
chr20:32235273(+) A-I exon 3'UTR    15342557   //15258596
chr20:32107169(+) A-I intron -    22327324
chr20:32233835(+) A-I intron -    22327324
chr20:32234467(+) A-I intron -    22327324
chr20:32234560(+) A-I intron -    22327324
chr20:32231585(+) A-I intron -    22028664
chr20:32231587(+) A-I intron -    22028664
chr20:32231589(+) A-I intron -    22028664
chr20:32231591(+) A-I intron -    22028664
chr20:32231593(+) A-I intron -    22028664
chr20:32231595(+) A-I intron -    22028664
chr20:32231597(+) A-I intron -    22028664
chr20:32231599(+) A-I intron -    22028664
chr20:32231601(+) A-I intron -    22028664
chr20:32231603(+) A-I intron -    22028664
chr20:32231605(+) A-I intron -    22028664
chr20:32231607(+) A-I intron -    22028664
chr20:32231609(+) A-I intron -    22028664
chr20:32231611(+) A-I intron -    22028664
chr20:32231613(+) A-I intron -    22028664
chr20:32231615(+) A-I intron -    22028664
chr20:32231617(+) A-I intron -    22028664
chr20:32231619(+) A-I intron -    22028664
chr20:32231626(+) A-I intron -    22028664
chr20:32234412(+) A-I intron -    21960545
chr20:32234421(+) A-I intron -    21960545
chr20:32234587(+) A-I intron -    21960545
chr20:32234588(+) A-I intron -    21960545
chr20:32235310(+) A-I intron -    21960545
chr20:32235324(+) A-I intron -    21960545
chr20:32113558(+) A-I intron -    21960545
chr20:32187488(+) A-I intron -    21960545
chr20:32217988(+) A-I intron -    21960545
chr20:32217989(+) A-I intron -    21960545
chr20:32227215(+) T-C intron -    21725310
chr20:32235273(+) A-G intron -    21725310
chr20:32079870(+) A-G intron -    22484847
chr20:32081876(+) A-G intron -    22484847
chr20:32081955(+) A-G intron -    22484847
chr20:32082988(+) A-G intron -    22484847
chr20:32097115(+) A-G intron -    22484847
chr20:32097148(+) A-G intron -    22484847
chr20:32097498(+) A-G intron -    22484847
chr20:32097515(+) A-G intron -    22484847
chr20:32099408(+) A-G intron -    22484847
chr20:32099836(+) A-G intron -    22484847
chr20:32101259(+) A-G intron -    22484847
chr20:32101265(+) A-G intron -    22484847
chr20:32101266(+) A-G intron -    22484847
chr20:32101307(+) A-G intron -    22484847
chr20:32102964(+) A-G intron -    22484847
chr20:32107129(+) A-G intron -    22484847
chr20:32107156(+) A-G intron -    22484847
chr20:32107169(+) A-G intron -    22484847
chr20:32107258(+) A-G intron -    22484847
chr20:32107806(+) A-G intron -    22484847
chr20:32110427(+) A-G intron -    22484847
chr20:32179032(+) A-G intron -    22484847
chr20:32220967(+) A-G intron -    22484847
chr20:32222319(+) A-G intron -    22484847
chr20:32222322(+) A-G intron -    22484847
chr20:32223573(+) A-G intron -    22484847
chr20:32233828(+) A-G intron -    22484847
chr20:32233834(+) A-G intron -    22484847
chr20:32233835(+) A-G intron -    22484847
chr20:32233909(+) A-G intron -    22484847
chr20:32233910(+) A-G intron -    22484847
chr20:32234019(+) A-G intron -    22484847
chr20:32234068(+) A-G intron -    22484847
chr20:32234080(+) A-G intron -    22484847
chr20:32234083(+) A-G intron -    22484847
chr20:32234407(+) A-G intron -    22484847
chr20:32234412(+) A-G intron -    22484847
chr20:32234421(+) A-G intron -    22484847
chr20:32234460(+) A-G intron -    22484847
chr20:32234467(+) A-G intron -    22484847
chr20:32234476(+) A-G intron -    22484847
chr20:32234536(+) A-G intron -    22484847
chr20:32234546(+) A-G intron -    22484847
chr20:32234560(+) A-G intron -    22484847
chr20:32234574(+) A-G intron -    22484847
chr20:32234587(+) A-G intron -    22484847
chr20:32234599(+) A-G intron -    22484847
chr20:32235191(+) A-G intron -    22484847
chr20:32235220(+) A-G intron -    22484847
chr20:32235230(+) A-G intron -    22484847
chr20:32235236(+) A-G intron -    22484847
chr20:32235310(+) A-G intron -    22484847
chr20:32235364(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CBFA2T2
chr20:32077985-32077986(+) m6A 5'UTR//exon       24209618
chr20:32078024-32078025(+) m6A 5'UTR//exon       24209618
chr20:32189705-32189706(+) m6A 5'UTR//intron       24284625
chr20:32194873-32194874(+) m6A CDS//exon       24284625//24981863
chr20:32217597-32217598(+) Cm CDS//exon       -
chr20:32227496-32227497(+) m6A 5'UTR//intron       -
chr20:32228262-32228263(+) m6A CDS       24981863
chr20:32232162-32232163(+) m6A CDS       24284625//24209618//25456834//24981863
chr20:32232185-32232186(+) m6A CDS       24284625//24209618//25456834//24981863
chr20:32232240-32232241(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr20:32232273-32232274(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr20:32232383-32232384(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr20:32232445-32232446(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:32232459-32232460(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:32232511-32232512(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:32232524-32232525(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:32232750-32232751(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32232787-32232788(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32232943-32232944(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr20:32232972-32232973(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr20:32232996-32232997(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr20:32233065-32233066(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr20:32233072-32233073(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr20:32233081-32233082(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr20:32233109-32233110(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr20:32233147-32233148(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr20:32233314-32233315(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:32233375-32233376(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr20:32233479-32233480(+) m6A 3'UTR       24284625//24209618
chr20:32233527-32233528(+) m6A 3'UTR       24284625//24209618
chr20:32233546-32233547(+) m6A 3'UTR       24284625//24209618
chr20:32235646-32235647(+) m6A 3'UTR       27773535
chr20:32235683-32235684(+) m6A 3'UTR       27773535
chr20:32235935-32235936(+) m6A 3'UTR       24284625
chr20:32236032-32236033(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr20:32236040-32236041(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr20:32236079-32236080(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32236095-32236096(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32236123-32236124(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32236141-32236142(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr20:32236177-32236178(+) m6A 3'UTR       24284625//25456834//22608085
chr20:32236187-32236188(+) m6A 3'UTR       24284625//25456834//22608085
chr20:32236640-32236641(+) m6A 3'UTR       24284625//27773535
chr20:32236647-32236648(+) m6A 3'UTR       24284625//27773535
chr20:32236723-32236724(+) m6A 3'UTR       27773535
chr20:32236819-32236820(+) m6A 3'UTR       24284625//24981863//22608085
chr20:32236851-32236852(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr20:32236883-32236884(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr20:32236908-32236909(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32236913-32236914(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32236920-32236921(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32236949-32236950(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32236954-32236955(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32236996-32236997(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32237017-32237018(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32237048-32237049(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:32237170-32237171(+) m6A 3'UTR       24284625//24209618//25456834//24981863
chr20:32237345-32237346(+) m6A 3'UTR       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CBFA2T2
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-11-5p
Interactor2: CBFA2T2

Evidence Support:


Weak-Evidence PAR-CLIP
Prediction-Evidence cRep//miRanda//PARalyzer//Targetscan
Support Database RepTar//ViRBase//VmiReg

References:


PMID 22100165 Target region 3'UTR
Source RepTar//ViRBase//VmiReg Interactor1 expression None
Tissue or cell line BC-3 cells Interactor2 expression None
Description Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6B BC-3 derived 3'UTR clusters with seed matches to expressed miRNAs.

Starting a new search, please wait ...