Basic Information:

  VIRBase ID:  

VHID00481712

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6040

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-11-5p:  MIMAT0015213          PDE7A:  NM_001242318     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-11-5p	PDE7A
miRBase Accession/Entrez ID	MIMAT0015213	5150
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HCP1//PDE7

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PDE7A	chr8:66642597(-) A-I      intronic chr8:66642997(-) A-I      intronic chr8:66643046(-) A-I      intronic chr8:66644930(-) A-I      intronic chr8:66644947(-) A-I      intronic chr8:66647763(-) A-I      intronic chr8:66648759(-) A-I      intronic chr8:66648838(-) A-I      intronic chr8:66669883(-) A-I      intronic chr8:66669939(-) A-I      intronic chr8:66689383(-) A-I      intronic chr8:66689407(-) A-I      intronic chr8:66689411(-) A-I      intronic chr8:66689426(-) A-I      intronic chr8:66682571(-) A-I      intronic chr8:66682550(-) A-I      intronic chr8:66682536(-) A-I      intronic chr8:66682535(-) A-I      intronic chr8:66680833(-) A-I      intronic chr8:66680797(-) A-I      intronic chr8:66680785(-) A-I      intronic chr8:66682574(-) A-I      intronic chr8:66680595(-) A-I      intronic chr8:66733116(-) A-I      intronic chr8:66732998(-) A-I      intronic chr8:66732994(-) A-I      intronic chr8:66732628(-) A-I      intronic chr8:66732605(-) A-I      intronic chr8:66732587(-) A-I      intronic chr8:66732574(-) A-I      intronic chr8:66732509(-) A-I      intronic chr8:66732483(-) A-I      intronic chr8:66732413(-) A-I      intronic chr8:66732374(-) A-I      intronic chr8:66731545(-) A-I      intronic chr8:66731521(-) A-I      intronic chr8:66731514(-) A-I      intronic chr8:66731509(-) A-I      intronic chr8:66731505(-) A-I      intronic chr8:66731387(-) A-I      intronic chr8:66730259(-) A-I      intronic chr8:66730192(-) A-I      intronic chr8:66730177(-) A-I      intronic chr8:66730162(-) A-I      intronic chr8:66730155(-) A-I      intronic chr8:66730116(-) A-I      intronic chr8:66730109(-) A-I      intronic chr8:66727253(-) A-I      intronic chr8:66727234(-) A-I      intronic chr8:66727233(-) A-I      intronic chr8:66727229(-) A-I      intronic chr8:66727216(-) A-I      intronic chr8:66688027(-) A-I      intronic chr8:66688017(-) A-I      intronic chr8:66687931(-) A-I      intronic chr8:66678472(-) A-I      intronic chr8:66678453(-) A-I      intronic chr8:66678385(-) A-I      intronic chr8:66678384(-) A-I      intronic chr8:66678369(-) A-I      intronic chr8:66678354(-) A-I      intronic chr8:66678345(-) A-I      intronic chr8:66678319(-) A-I      intronic chr8:66678318(-) A-I      intronic chr8:66678313(-) A-I      intronic chr8:66673572(-) A-I      intronic chr8:66673571(-) A-I      intronic chr8:66673566(-) A-I      intronic chr8:66673505(-) A-I      intronic chr8:66673504(-) A-I      intronic chr8:66673502(-) A-I      intronic chr8:66673489(-) A-I      intronic chr8:66673439(-) A-I      intronic chr8:66670057(-) A-I      intronic chr8:66669962(-) A-I      intronic chr8:66669911(-) A-I      intronic chr8:66667469(-) A-I      intronic chr8:66667396(-) A-I      intronic chr8:66667358(-) A-I      intronic chr8:66667204(-) A-I      intronic chr8:66667153(-) A-I      intronic chr8:66667138(-) A-I      intronic chr8:66667118(-) A-I      intronic chr8:66666843(-) A-I      intronic chr8:66666748(-) A-I      intronic chr8:66666746(-) A-I      intronic chr8:66666743(-) A-I      intronic chr8:66666742(-) A-I      intronic chr8:66666740(-) A-I      intronic chr8:66666737(-) A-I      intronic chr8:66664008(-) A-I      intronic chr8:66663904(-) A-I      intronic chr8:66650949(-) A-I      intronic chr8:66650947(-) A-I      intronic chr8:66650855(-) A-I      intronic chr8:66650846(-) A-I      intronic chr8:66649929(-) A-I      intronic chr8:66649923(-) A-I      intronic chr8:66649787(-) A-I      intronic chr8:66649341(-) A-I      intronic chr8:66649324(-) A-I      intronic chr8:66649317(-) A-I      intronic chr8:66649156(-) A-I      intronic chr8:66648743(-) A-I      intronic chr8:66648055(-) A-I      intronic chr8:66647989(-) A-I      intronic chr8:66647818(-) A-I      intronic chr8:66647802(-) A-I      intronic chr8:66647797(-) A-I      intronic chr8:66647759(-) A-I      intronic chr8:66647704(-) A-I      intronic chr8:66645757(-) A-I      intronic chr8:66645756(-) A-I      intronic chr8:66644917(-) A-I      intronic chr8:66643096(-) A-I      intronic chr8:66643095(-) A-I      intronic chr8:66643035(-) A-I      intronic chr8:66642977(-) A-I      intronic chr8:66642959(-) A-I      intronic chr8:66642904(-) A-I      intronic chr8:66642628(-) A-I      intronic chr8:66642594(-) A-I      intronic chr8:66642593(-) A-I      intronic chr8:66642590(-) A-I      intronic chr8:66642100(-) A-I      intronic chr8:66641981(-) A-I      intronic chr8:66641973(-) A-I      intronic chr8:66641910(-) A-I      intronic chr8:66641895(-) A-I      intronic chr8:66641864(-) A-I      intronic chr8:66641830(-) A-I      intronic chr8:66643049(-) A-I      intronic chr8:66650000(-) A-I      intronic chr8:66642946(-) A-I      intronic chr8:66647675(-) A-I      intronic chr8:66642906(-) A-I      intronic chr8:66642919(-) A-I      intronic chr8:66641904(-) A-I      intronic chr8:66643076(-) A-I      intronic chr8:66650802(-) A-I      intronic chr8:66642694(-) A-I      intronic chr8:66666997(-) A-I      intronic chr8:66649931(-) A-I      intronic chr8:66642031(-) A-I      intronic chr8:66649337(-) A-I      intronic chr8:66642027(-) A-I      intronic chr8:66644816(-) A-I      intronic chr8:66642544(-) A-I      intronic chr8:66732579(-) A-I      intronic chr8:66650035(-) A-I      intronic chr8:66644921(-) A-I      intronic chr8:66649293(-) A-I      intronic chr8:66667088(-) A-I      intronic chr8:66732910(-) A-I      intronic chr8:66648731(-) A-I      intronic chr8:66667191(-) A-I      intronic chr8:66648870(-) A-I      intronic chr8:66648753(-) A-I      intronic chr8:66644827(-) A-I      intronic chr8:66645738(-) A-I      intronic chr8:66642918(-) A-I      intronic chr8:66727280(-) A-I      intronic chr8:66642608(-) A-I      intronic chr8:66732903(-) A-I      intronic chr8:66644403(-) A-I      intronic chr8:66649932(-) A-I      intronic chr8:66649947(-) A-I      intronic chr8:66649892(-) A-I      intronic chr8:66650026(-) A-I      intronic chr8:66649930(-) A-I      intronic chr8:66649886(-) A-I      intronic chr8:66648891(-) A-I      intronic chr8:66648846(-) A-I      intronic chr8:66648767(-) A-I      intronic chr8:66730260(-) A-I      intronic chr8:66733057(-) A-I      intronic chr8:66645732(-) A-I      intronic chr8:66647792(-) A-I      intronic chr8:66689400(-) A-I      intronic chr8:66746075(-) A-I      intronic chr8:66634129(-) A-I      3'UTR chr8:66732597(-) A-I      intronic chr8:66648866(-) A-I      intronic chr8:66648963(-) A-I      intronic chr8:66649140(-) A-I      intronic chr8:66647711(-) A-I      intronic chr8:66649922(-) A-I      intronic chr8:66667334(-) A-I      intronic chr8:66641922(-) A-I      intronic chr8:66649924(-) A-I      intronic chr8:66649233(-) A-I      intronic chr8:66649190(-) A-I      intronic chr8:66644951(-) A-I      intronic chr8:66733004(-) A-I      intronic chr8:66667318(-) A-I      intronic chr8:66667037(-) A-I      intronic chr8:66645838(-) A-I      intronic chr8:66643114(-) A-I      intronic chr8:66643058(-) A-I      intronic chr8:66672431(-) A-I      intronic chr8:66667341(-) A-I      intronic chr8:66650935(-) A-I      intronic chr8:66732979(-) A-I      intronic chr8:66667420(-) A-I      intronic chr8:66667137(-) A-I      intronic chr8:66667459(-) A-I      intronic chr8:66733028(-) A-I      intronic chr8:66647825(-) A-I      intronic chr8:66641896(-) A-I      intronic chr8:66648814(-) A-I      intronic chr8:66731550(-) A-I      intronic chr8:66650941(-) A-I      intronic chr8:66670047(-) A-I      intronic chr8:66642945(-) A-I      intronic chr8:66667034(-) A-I      intronic chr8:66649933(-) A-I      intronic chr8:66642513(-) A-I      intronic chr8:66650905(-) A-I      intronic chr8:66666766(-) A-I      intronic chr8:66672363(-) A-I      intronic chr8:66643015(-) A-I      intronic chr8:66647819(-) A-I      intronic chr8:66685067(-) A-I      intronic chr8:66643106(-) A-I      intronic chr8:66642971(-) A-I      intronic chr8:66649329(-) A-I      intronic chr8:66648830(-) A-I      intronic chr8:66672391(-) A-I      intronic chr8:66649773(-) A-I      intronic chr8:66746155(-) A-I      intronic chr8:66672353(-) A-I      intronic chr8:66642514(-) A-I      intronic chr8:66648766(-) A-I      intronic chr8:66642584(-) A-I      intronic chr8:66642522(-) A-I      intronic chr8:66649214(-) A-I      intronic chr8:66732519(-) A-I      intronic chr8:66642647(-) A-I      intronic chr8:66643144(-) A-I      intronic chr8:66649326(-) A-I      intronic chr8:66669921(-) A-I      intronic chr8:66733003(-) A-I      intronic chr8:66649296(-) A-I      intronic chr8:66667195(-) A-I      intronic chr8:66642966(-) A-I      intronic chr8:66648821(-) A-I      intronic chr8:66644331(-) A-I      intronic chr8:66649309(-) A-I      intronic chr8:66643000(-) A-I      intronic chr8:66641831(-) A-I      intronic chr8:66647616(-) A-I      intronic chr8:66647963(-) A-I      intronic chr8:66644944(-) A-I      intronic chr8:66644525(-) A-I      intronic chr8:66643101(-) A-I      intronic chr8:66744931(-) A-I      intronic chr8:66649266(-) A-I      intronic chr8:66642071(-) A-I      intronic chr8:66644936(-) A-I      intronic chr8:66649865(-) A-I      intronic chr8:66642585(-) A-I      intronic chr8:66642017(-) A-I      intronic chr8:66649185(-) A-I      intronic chr8:66644943(-) A-I      intronic chr8:66634036(-) A-I      intronic chr8:66642583(-) A-I      intronic chr8:66642993(-) A-I      intronic chr8:66642454(-) A-I      intronic chr8:66731511(-) A-I      intronic chr8:66672366(-) A-I      intronic chr8:66643018(-) A-I      intronic chr8:66647646(-) A-I      intronic chr8:66649248(-) A-I      intronic chr8:66746077(-) A-I      intronic chr8:66650797(-) A-I      intronic chr8:66649882(-) A-I      intronic chr8:66648770(-) A-I      intronic chr8:66643071(-) A-I      intronic chr8:66648804(-) A-I      intronic chr8:66649891(-) A-I      intronic chr8:66732617(-) A-I      intronic chr8:66649215(-) A-I      intronic chr8:66642592(-) A-I      intronic chr8:66642591(-) A-I      intronic chr8:66650027(-) A-I      intronic chr8:66642470(-) A-I      intronic chr8:66649918(-) A-I      intronic chr8:66649229(-) A-I      intronic chr8:66642580(-) A-I      intronic chr8:66730254(-) A-I      intronic chr8:66647676(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PDE7A	chr8:66642454(-) A-I intron -    15342557 chr8:66642470(-) A-I intron -    15342557   //21960545 chr8:66642513(-) A-I intron -    15342557 chr8:66642514(-) A-I intron -    15342557 chr8:66642518(-) A-I intron -    15342557   //22327324 chr8:66642521(-) A-I intron -    15342557 chr8:66642522(-) A-I intron -    15342557 chr8:66642544(-) A-I intron -    15342557 chr8:66645738(-) A-I intron -    15342557 chr8:66645848(-) A-I intron -    15342557 chr8:66642583(-) A-I intron -    22327324 chr8:66642584(-) A-I intron -    22327324 chr8:66642945(-) A-I intron -    21960545   //22327324 chr8:66642966(-) A-I intron -    21960545   //22327324 chr8:66643015(-) A-I intron -    22327324 chr8:66643018(-) A-I intron -    21960545   //22327324 chr8:66643075(-) A-I intron -    22327324 chr8:66643076(-) A-I intron -    22327324 chr8:66643144(-) A-I intron -    21960545   //22327324 chr8:66648870(-) A-I intron -    22327324 chr8:66648891(-) A-I intron -    21960545   //22327324 chr8:66649865(-) A-I intron -    22327324 chr8:66649936(-) A-I intron -    22327324 chr8:66641859(-) A-I intron -    21960545 chr8:66642958(-) A-I intron -    21960545 chr8:66643014(-) A-I intron -    21960545 chr8:66643071(-) A-I intron -    21960545 chr8:66648766(-) A-I intron -    21960545 chr8:66648785(-) A-I intron -    21960545 chr8:66680660(-) A-G intron -    22484847 chr8:66680725(-) A-G intron -    22484847 chr8:66680788(-) A-G intron -    22484847 chr8:66680796(-) A-G intron -    22484847 chr8:66680800(-) A-G intron -    22484847 chr8:66680809(-) A-G intron -    22484847 chr8:66680830(-) A-G intron -    22484847 chr8:66680831(-) A-G intron -    22484847 chr8:66680853(-) A-G intron -    22484847 chr8:66682594(-) T-C intron -    22484847 chr8:66634129(-) A-G intron -    22484847 chr8:66641831(-) A-G intron -    22484847 chr8:66641859(-) A-G intron -    22484847 chr8:66641884(-) A-G intron -    22484847 chr8:66641892(-) T-C intron -    22484847 chr8:66641922(-) A-G intron -    22484847 chr8:66642017(-) A-G intron -    22484847 chr8:66642027(-) A-G intron -    22484847 chr8:66642031(-) A-G intron -    22484847 chr8:66642433(-) C-A intron -    22484847 chr8:66642518(-) A-G intron -    22484847 chr8:66642521(-) A-G intron -    22484847 chr8:66642580(-) A-G intron -    22484847 chr8:66642583(-) A-G intron -    22484847 chr8:66642584(-) A-G intron -    22484847 chr8:66642585(-) A-G intron -    22484847 chr8:66642591(-) A-G intron -    22484847 chr8:66642608(-) A-G intron -    22484847 chr8:66642906(-) A-G intron -    22484847 chr8:66642919(-) A-G intron -    22484847 chr8:66642945(-) A-G intron -    22484847 chr8:66642946(-) A-G intron -    22484847 chr8:66642949(-) T-C intron -    22484847 chr8:66642953(-) T-C intron -    22484847 chr8:66642958(-) A-G intron -    22484847 chr8:66642966(-) A-G intron -    22484847 chr8:66642971(-) A-G intron -    22484847 chr8:66643000(-) A-G intron -    22484847 chr8:66643003(-) T-C intron -    22484847 chr8:66643004(-) T-C intron -    22484847 chr8:66643013(-) T-C intron -    22484847 chr8:66643016(-) T-C intron -    22484847 chr8:66643018(-) A-G intron -    22484847 chr8:66643047(-) T-C intron -    22484847 chr8:66643050(-) A-G intron -    22484847 chr8:66643065(-) T-C intron -    22484847 chr8:66643070(-) T-C intron -    22484847 chr8:66643071(-) A-G intron -    22484847 chr8:66643075(-) A-G intron -    22484847 chr8:66643076(-) A-G intron -    22484847 chr8:66643101(-) A-G intron -    22484847 chr8:66643106(-) A-G intron -    22484847 chr8:66643111(-) A-G intron -    22484847 chr8:66643114(-) A-G intron -    22484847 chr8:66643144(-) A-G intron -    22484847 chr8:66643156(-) A-G intron -    22484847 chr8:66644296(-) A-G intron -    22484847 chr8:66644311(-) C-T intron -    22484847 chr8:66644525(-) A-G intron -    22484847 chr8:66644526(-) C-G intron -    22484847 chr8:66644827(-) A-G intron -    22484847 chr8:66644944(-) A-G intron -    22484847 chr8:66644951(-) A-G intron -    22484847 chr8:66645732(-) A-G intron -    22484847 chr8:66645838(-) A-G intron -    22484847 chr8:66645848(-) A-G intron -    22484847 chr8:66647616(-) A-G intron -    22484847 chr8:66647619(-) A-G intron -    22484847 chr8:66647672(-) A-G intron -    22484847 chr8:66647792(-) A-G intron -    22484847 chr8:66648726(-) T-C intron -    22484847 chr8:66648766(-) A-G intron -    22484847 chr8:66648770(-) A-G intron -    22484847 chr8:66648785(-) A-G intron -    22484847 chr8:66648814(-) A-G intron -    22484847 chr8:66648821(-) A-G intron -    22484847 chr8:66648824(-) A-G intron -    22484847 chr8:66648866(-) A-G intron -    22484847 chr8:66648870(-) A-G intron -    22484847 chr8:66648891(-) A-G intron -    22484847 chr8:66648935(-) A-G intron -    22484847 chr8:66648963(-) A-G intron -    22484847 chr8:66649185(-) A-G intron -    22484847 chr8:66649194(-) A-G intron -    22484847 chr8:66649293(-) A-G intron -    22484847 chr8:66649299(-) A-G intron -    22484847 chr8:66649309(-) A-G intron -    22484847 chr8:66649329(-) A-G intron -    22484847 chr8:66649783(-) T-C intron -    22484847 chr8:66649854(-) T-C intron -    22484847 chr8:66649865(-) A-G intron -    22484847 chr8:66649882(-) A-G intron -    22484847 chr8:66649886(-) A-G intron -    22484847 chr8:66649891(-) A-G intron -    22484847 chr8:66649895(-) T-C intron -    22484847 chr8:66649918(-) A-G intron -    22484847 chr8:66649922(-) A-G intron -    22484847 chr8:66649924(-) A-G intron -    22484847 chr8:66649928(-) T-C intron -    22484847 chr8:66649930(-) A-G intron -    22484847 chr8:66649932(-) A-G intron -    22484847 chr8:66649933(-) A-G intron -    22484847 chr8:66649936(-) A-G intron -    22484847 chr8:66649973(-) A-G intron -    22484847 chr8:66649991(-) A-G intron -    22484847 chr8:66649997(-) T-G intron -    22484847 chr8:66650000(-) A-G intron -    22484847 chr8:66650004(-) A-G intron -    22484847 chr8:66650027(-) A-G intron -    22484847 chr8:66650035(-) A-G intron -    22484847 chr8:66650797(-) A-G intron -    22484847 chr8:66650802(-) A-G intron -    22484847 chr8:66650927(-) G-A intron -    22484847 chr8:66650935(-) A-G intron -    22484847 chr8:66650940(-) A-G intron -    22484847 chr8:66650941(-) A-G intron -    22484847 chr8:66666710(-) A-G intron -    22484847 chr8:66666711(-) A-G intron -    22484847 chr8:66666766(-) A-G intron -    22484847 chr8:66666967(-) A-G intron -    22484847 chr8:66667034(-) A-G intron -    22484847 chr8:66667056(-) A-G intron -    22484847 chr8:66667088(-) A-G intron -    22484847 chr8:66668147(-) A-G intron -    22484847 chr8:66669916(-) A-G intron -    22484847 chr8:66669921(-) A-G intron -    22484847 chr8:66669978(-) A-G intron -    22484847 chr8:66670030(-) A-G intron -    22484847 chr8:66670036(-) A-G intron -    22484847 chr8:66670047(-) A-G intron -    22484847 chr8:66672363(-) A-G intron -    22484847 chr8:66672366(-) A-G intron -    22484847 chr8:66672391(-) A-G intron -    22484847 chr8:66672406(-) A-G intron -    22484847 chr8:66672431(-) A-G intron -    22484847 chr8:66672459(-) A-G intron -    22484847 chr8:66700023(-) C-T intron -    22484847 chr8:66724447(-) C-T intron -    22484847 chr8:66727280(-) A-G intron -    22484847 chr8:66727314(-) A-T intron -    22484847 chr8:66727315(-) G-T intron -    22484847 chr8:66730254(-) A-G intron -    22484847 chr8:66730260(-) A-G intron -    22484847 chr8:66731457(-) A-G intron -    22484847 chr8:66731511(-) A-G intron -    22484847 chr8:66731550(-) A-G intron -    22484847 chr8:66732474(-) A-G intron -    22484847 chr8:66732519(-) A-G intron -    22484847 chr8:66732545(-) A-G intron -    22484847 chr8:66732569(-) A-G intron -    22484847 chr8:66732579(-) A-G intron -    22484847 chr8:66732597(-) A-G intron -    22484847 chr8:66732617(-) A-G intron -    22484847 chr8:66732903(-) A-G intron -    22484847 chr8:66732910(-) A-G intron -    22484847 chr8:66732953(-) A-G intron -    22484847 chr8:66732979(-) A-G intron -    22484847 chr8:66733003(-) A-G intron -    22484847 chr8:66733004(-) A-G intron -    22484847 chr8:66733028(-) A-G intron -    22484847 chr8:66733052(-) A-G intron -    22484847 chr8:66733057(-) A-G intron -    22484847 chr8:66746075(-) A-G intron -    22484847 chr8:66746077(-) A-G intron -    22484847 chr8:66746155(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PDE7A	chr8:66630191-66630192(-) m6A 3'UTR       26404942 chr8:66630198-66630199(-) m6A 3'UTR       26404942 chr8:66630209-66630210(-) m6A 3'UTR       26404942 chr8:66630222-66630223(-) m6A 3'UTR       26404942 chr8:66630238-66630239(-) m6A 3'UTR       26404942 chr8:66630771-66630772(-) m6A 3'UTR       27773535 chr8:66630875-66630876(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:66630965-66630966(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr8:66630972-66630973(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr8:66630989-66630990(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr8:66630998-66630999(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr8:66631064-66631065(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22608085 chr8:66631197-66631198(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631303-66631304(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631337-66631338(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631343-66631344(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631363-66631364(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631450-66631451(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631506-66631507(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631515-66631516(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631561-66631562(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631585-66631586(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631602-66631603(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631614-66631615(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631647-66631648(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631658-66631659(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66634070-66634071(-) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085 chr8:66634139-66634140(-) m6A 3'UTR//intron       27773535 chr8:66637026-66637027(-) m6A CDS       27773535 chr8:66637032-66637033(-) m6A CDS       27773535 chr8:66637039-66637040(-) m6A CDS       27773535 chr8:66754096-66754097(-) m6A 5'UTR//exon//intron       24284625 chr8:66754442-66754443(-) m6A exon       25456834 chr8:66754511-66754512(-) m6A exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PDE7A	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-11-5p
Interactor2: PDE7A

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	cRep//miRanda//PARalyzer//Targetscan
Support Database	RepTar//ViRBase//VIRmiRNA//VmiReg

References:

PMID	22100165	Target region	3'UTR
Source	RepTar//ViRBase//VIRmiRNA//VmiReg	Interactor1 expression	None
Tissue or cell line	BC-1 cells//BC-3 cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.