Basic Information:

  VIRBase ID:  

VHID00481036

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10a-5p:  MIMAT0015212          KLHL17:  NM_198317     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10a-5p	KLHL17
miRBase Accession/Entrez ID	MIMAT0015212	339451
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KLHL17	chr1:897423-897424(+) m6A CDS//exon//intron       - chr1:900442-900443(+) m6A 3'UTR//CDS       - chr1:900617-900618(+) m6A 3'UTR       24284625 chr1:900868-900869(+) m6A 3'UTR       27371828 chr1:900919-900920(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KLHL17	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10a-5p
Interactor2: KLHL17

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg