Basic Information:

  VIRBase ID:  

VHID00480295

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10a-5p:  MIMAT0015212          SUV39H2:  NM_024670     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10a-5p	SUV39H2
miRBase Accession/Entrez ID	MIMAT0015212	79723
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KMT1B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SUV39H2	chr10:14932533(+) A-I      intronic chr10:14925584(+) A-I      intronic chr10:14932570(+) A-I      intronic chr10:14925449(+) A-I      intronic chr10:14937377(+) A-I      intronic chr10:14925583(+) A-I      intronic chr10:14925448(+) A-I      intronic chr10:14932583(+) A-I      intronic chr10:14924996(+) A-I      intronic chr10:14946157(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SUV39H2	chr10:14920856-14920857(+) m6A 5'UTR       24981863//22608085 chr10:14923600-14923601(+) m6A 5'UTR//CDS//intron       27773535 chr10:14938903-14938904(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085 chr10:14939007-14939008(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr10:14939018-14939019(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr10:14939026-14939027(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr10:14939062-14939063(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr10:14939095-14939096(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr10:14939169-14939170(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//22575960//22608085 chr10:14939194-14939195(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//22575960//22608085 chr10:14939310-14939311(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//22575960//22608085 chr10:14939435-14939436(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085 chr10:14939465-14939466(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085 chr10:14941569-14941570(+) m6A 3'UTR//CDS       24209618//24981863//22608085 chr10:14941613-14941614(+) m6A 3'UTR//CDS       24209618//22608085 chr10:14944587-14944588(+) m6A 3'UTR       22608085 chr10:14944638-14944639(+) m6A 3'UTR       22608085 chr10:14945122-14945123(+) m6A 3'UTR       22608085 chr10:14945147-14945148(+) m6A 3'UTR       22608085 chr10:14945165-14945166(+) m6A 3'UTR       22608085 chr10:14945249-14945250(+) m6A 3'UTR       22608085 chr10:14945262-14945263(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SUV39H2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10a-5p
Interactor2: SUV39H2

Evidence Support:

Prediction-Evidence	RNAHybrid//Targetscan
Support Database	VmiReg