Basic Information:

  VIRBase ID:  

VHID00479776

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10a-5p:  MIMAT0015212          ANGPTL4:  NR_104213     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10a-5p	ANGPTL4
miRBase Accession/Entrez ID	MIMAT0015212	51129
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARP4//FIAF//HARP//HFARP//NL2//PGAR//pp1158//TGQTL//UNQ171

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ANGPTL4	chr19:8433650(+) A-I      intronic chr19:8434438(+) A-I      intronic chr19:8434467(+) A-I      intronic chr19:8434535(+) A-I      intronic chr19:8434811(+) A-I      intronic chr19:8433487(+) A-I      intronic chr19:8432779(+) A-I      intronic chr19:8433660(+) A-I      intronic chr19:8432934(+) A-I      intronic chr19:8429932(+) A-I      intronic chr19:8429933(+) A-I      intronic chr19:8434967(+) A-I      intronic chr19:8434455(+) A-I      intronic chr19:8434442(+) A-I      intronic chr19:8434416(+) A-I      intronic chr19:8434412(+) A-I      intronic chr19:8434407(+) A-I      intronic chr19:8434399(+) A-I      intronic chr19:8433755(+) A-I      intronic chr19:8433691(+) A-I      intronic chr19:8433595(+) A-I      intronic chr19:8433579(+) A-I      intronic chr19:8433154(+) A-I      intronic chr19:8433064(+) A-I      intronic chr19:8433052(+) A-I      intronic chr19:8433029(+) A-I      intronic chr19:8429891(+) A-I      intronic chr19:8429888(+) A-I      intronic chr19:8429867(+) A-I      intronic chr19:8434966(+) A-I      intronic chr19:8434940(+) A-I      intronic chr19:8434937(+) A-I      intronic chr19:8434922(+) A-I      intronic chr19:8434911(+) A-I      intronic chr19:8434891(+) A-I      intronic chr19:8434886(+) A-I      intronic chr19:8434877(+) A-I      intronic chr19:8434860(+) A-I      intronic chr19:8434817(+) A-I      intronic chr19:8434806(+) A-I      intronic chr19:8434805(+) A-I      intronic chr19:8434747(+) A-I      intronic chr19:8434618(+) A-I      intronic chr19:8434612(+) A-I      intronic chr19:8434599(+) A-I      intronic chr19:8434538(+) A-I      intronic chr19:8434499(+) A-I      intronic chr19:8434518(+) A-I      intronic chr19:8434504(+) A-I      intronic chr19:8436918(+) A-I      intronic chr19:8436903(+) A-I      intronic chr19:8436849(+) A-I      intronic chr19:8436827(+) A-I      intronic chr19:8436728(+) A-I      intronic chr19:8436706(+) A-I      intronic chr19:8434980(+) A-I      intronic chr19:8433591(+) A-I      intronic chr19:8433689(+) A-I      intronic chr19:8438412(+) A-I      intronic chr19:8434585(+) A-I      intronic chr19:8433557(+) A-I      intronic chr19:8433621(+) A-I      intronic chr19:8433167(+) A-I      intronic chr19:8438442(+) A-I      intronic chr19:8434394(+) A-I      intronic chr19:8438102(+) A-I      intronic chr19:8435069(+) A-I      intronic chr19:8434682(+) A-I      intronic chr19:8433659(+) A-I      intronic chr19:8437515(+) A-I      intronic chr19:8437891(+) A-I      intronic chr19:8433028(+) A-I      intronic chr19:8437205(+) A-I      intronic chr19:8432818(+) A-I      intronic chr19:8432784(+) A-I      intronic chr19:8434417(+) A-I      intronic chr19:8433577(+) A-I      intronic chr19:8437493(+) A-I      intronic chr19:8438103(+) A-I      intronic chr19:8433555(+) A-I      intronic chr19:8432972(+) A-I      intronic chr19:8434880(+) A-I      intronic chr19:8436703(+) A-I      intronic chr19:8434812(+) A-I      intronic chr19:8436904(+) A-I      intronic chr19:8432959(+) A-I      intronic chr19:8438335(+) A-I      intronic chr19:8434472(+) A-I      intronic chr19:8433068(+) A-I      intronic chr19:8433584(+) A-I      intronic chr19:8433110(+) A-I      intronic chr19:8436661(+) A-I      intronic chr19:8434503(+) A-I      intronic chr19:8437610(+) A-I      intronic chr19:8436671(+) A-I      intronic chr19:8436916(+) A-I      intronic chr19:8434761(+) A-I      intronic chr19:8434495(+) A-I      intronic chr19:8433165(+) A-I      intronic chr19:8437128(+) A-I      intronic chr19:8437491(+) A-I      intronic chr19:8433042(+) A-I      intronic chr19:8437123(+) A-I      intronic chr19:8434672(+) A-I      intronic chr19:8434827(+) A-I      intronic chr19:8434558(+) A-I      intronic chr19:8434418(+) A-I      intronic chr19:8437070(+) A-I      intronic chr19:8433481(+) A-I      intronic chr19:8437611(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ANGPTL4	chr19:8428239-8428240(+) m6A 5'UTR//exon       - chr19:8429152-8429153(+) m6A 5'UTR//exon//intron       - chr19:8429282-8429283(+) m6A CDS//exon//intron       - chr19:8438882-8438883(+) m6A 3'UTR//intron       25456834//24981863 chr19:8438890-8438891(+) m6A 3'UTR//intron       25456834//24981863 chr19:8438902-8438903(+) m6A 3'UTR//intron       25456834//24981863 chr19:8438986-8438987(+) m6A 3'UTR//intron       25456834//24981863 chr19:8439001-8439002(+) m6A 3'UTR//intron       25456834//24981863 chr19:8439047-8439048(+) m6A 3'UTR//intron       25456834//24981863 chr19:8439057-8439058(+) m6A 3'UTR//intron       25456834//24981863 chr19:8439076-8439077(+) m6A 3'UTR//CDS       25456834//24981863 chr19:8439093-8439094(+) m6A 3'UTR//CDS       25456834//24981863 chr19:8439117-8439118(+) m6A 3'UTR       25456834//24981863 chr19:8439184-8439185(+) m6A 3'UTR       25456834//24981863 chr19:8439251-8439252(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ANGPTL4	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10a-5p
Interactor2: ANGPTL4

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg