Basic Information:

  VIRBase ID:  

VHID00479766

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10a-5p:  MIMAT0015212          ZBTB7B:  NM_001377453     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10a-5p	ZBTB7B
miRBase Accession/Entrez ID	MIMAT0015212	51043
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	c-KROX//CKROX//hcKROX//THPOK//ZBTB15//ZFP-67//ZFP67//ZNF857B

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZBTB7B	chr1:154975141-154975142(+) m6A 5'UTR       24284625//24981863 chr1:154975150-154975151(+) m6A 5'UTR       24284625//24981863 chr1:154975158-154975159(+) m6A 5'UTR       24284625//24981863 chr1:154975319-154975320(+) m6A 5'UTR//exon       24284625//24209618//24981863 chr1:154975403-154975404(+) m6A 5'UTR//exon       24284625//24209618//24981863 chr1:154981549-154981550(+) Cm intron       - chr1:154982743-154982744(+) m6A 5'UTR//exon//intron       24284625//24209618//24981863 chr1:154982749-154982750(+) m6A 5'UTR//exon//intron       24284625//24209618//24981863 chr1:154982775-154982776(+) m6A 5'UTR//exon//intron       24284625//24209618//24981863 chr1:154987081-154987082(+) m6A 5'UTR//intron       24284625 chr1:154987179-154987180(+) m6A CDS//exon       24284625//24209618//24981863//22575960 chr1:154987410-154987411(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:154987671-154987672(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154987766-154987767(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154987785-154987786(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154987890-154987891(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154987913-154987914(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154987948-154987949(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154987968-154987969(+) m1A CDS       26863196 chr1:154988106-154988107(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154988127-154988128(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154988136-154988137(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154988215-154988216(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154988234-154988235(+) m6A CDS       24284625//24209618//22575960 chr1:154988714-154988715(+) Cm CDS       - chr1:154988796-154988797(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154988820-154988821(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr1:154988868-154988869(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr1:154988898-154988899(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr1:154989015-154989016(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:154989178-154989179(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr1:154989201-154989202(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr1:154989232-154989233(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr1:154989519-154989520(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:154989580-154989581(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:154989599-154989600(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:154989703-154989704(+) m6A 3'UTR       24284625//25456834//24981863 chr1:154989711-154989712(+) m6A 3'UTR       24284625//25456834//24981863 chr1:154990089-154990090(+) m6A 3'UTR       24284625//24209618 chr1:154990261-154990262(+) m6A 3'UTR       24284625 chr1:154990295-154990296(+) m6A 3'UTR       24284625 chr1:154990480-154990481(+) m6A 3'UTR       24284625 chr1:154990508-154990509(+) m6A 3'UTR       24284625 chr1:154990699-154990700(+) m6A 3'UTR       24284625 chr1:154990820-154990821(+) m6A 3'UTR       24284625 chr1:154990848-154990849(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZBTB7B	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10a-5p
Interactor2: ZBTB7B

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg